Pdol027974.2
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- kn
- Assembly
- GCA_963854805.1
- Location
- OY978452.1:22065692-22075222[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-118 8.3e-114 382.8 0.0 210 387 33 228 29 231 0.98 2 2 2.6e-07 0.0032 17.6 8.2 420 510 237 333 229 402 0.59
Sequence Information
- Coding Sequence
- ATGCATTTCCTTGCATACCGATTGGAAGAATTCTACACATTTCGAGACATTGGCTCCACCTCCCAAGGGACTCTCCCTTTCGGCGAGCTTtcatgtGTGGTGATATCGACGCAGGTGATGGTCGACGGTCCTCTTCTGGCGATATCGGACAACATGTTTGTCCACAACAACAGCAAGCACGGCCGAAGGGCAAAGAGACTCGACCCCACAGAAGGTATTGATGCCGCGACTGAGAGTAATTCTGGTCTCTACCCACCGCTACCAGTAGCGACGCCTTGCATCAAGGCGATATCACCCAGCGAGGGTTGGACGTCTGGCGGATCAACAGTCATCATTGTAGGAGACAATTTCTTCGACGGTTTACAAGTCGTATTTGGGACCATGCTTGTTTGGAGTGAGCTTATAACATCACATGCGATAAGAGTTCAGACGCCACCCCGACACATACCTGGAGTAGTGGAAGTAACGCTTTCGTATAAAAGTAAACAGTTCTGCAAGGGTGCACCGGGAAGATTCGTTTACGTTTCAGCACTCAACGAGCCGACGATAGATTACGGGTTCCAGCGGCTACAGAAACTTATACCGAGACATCCCGGTGACCCAGAAAAATTACCTAAGGAAATAATCCTGAAGAGAGCAGCTGACCTGGCCGAAGCGTTGTACTCAATGCCACGGAACAATCAGCTTGGGTTAGGAGCGCCGCGGTCCCCTCCAGCCAGCATGCCTTTCAACTCCTATACTGGACAGCTTGCGGTCAGCGTCCAGGATACGGCCGCCTCGCAGTGGACTGAAGAGGAGTATGCGCGCAGCGGCGGGTCGGTGTCGCCGCGGTACTGCTCCGCCGCGTCGACGCCGCACGCCGCGCCCGCCTCCTACCCGCATCCGCAACACTACCCCGCGCCTCCGACATCGCTCTTCAACACTAGCTCCCTGTCGCTAGGCCCGTACCACCCGGCGAACGTGAATGGCCACGTATCTGACCATCACTATAACGCGTATTATACGAAAGATAGCGCGTATTACACTGAAAGAAATGCGGATTCTAAGAGCGCCGCTGACTGTCCGGCAAACACTCATTCAAAATGCAGTGGCAGTGATATGAAAGGGGGTGGGGACAAAGGAGCAAAGAGGAGCGCTTTTGCGGTGGTGAGACACAGTCCGCCAAGGGTGTCCAATGTTCAGCATTCTCAGCACCACAATTGGCAGCTCGCAGTCCAGTGTTAG
- Protein Sequence
- MHFLAYRLEEFYTFRDIGSTSQGTLPFGELSCVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAATESNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTSSLSLGPYHPANVNGHVSDHHYNAYYTKDSAYYTERNADSKSAADCPANTHSKCSGSDMKGGGDKGAKRSAFAVVRHSPPRVSNVQHSQHHNWQLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634100;
- 90% Identity
- iTF_00895708;
- 80% Identity
- -