Basic Information

Gene Symbol
kn
Assembly
GCA_946251895.1
Location
CAMIUG010000032.1:487899-497469[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-119 4.1e-115 386.3 0.0 209 387 39 234 34 239 0.99
2 2 6.3e-08 0.00057 19.3 6.0 420 508 243 337 235 414 0.64

Sequence Information

Coding Sequence
ATGCAAGTAATGCATTTTCTTGCATACCGATTGGAAGAGTTCCGTACATTTCGAGACATTGGCTCCACCTCCCTTGGGACTCTCCCTTTCGGCGAGGACGGATCCTTCGATGTGTGTGTGGTTATATCAACGCAAGTGATGGTGGACGGTCCTCTCCTAGCAATCTCCGACAACATGTTCGTCCACAACAACAGCAAGCACGGTCGGAGAGCGAAGCGCCTGGACCCCACTGAAGGTACTGACGCCGCGCCTGACAGTAATTCCGGTCTATACCCCCCTTTACCAGTCGCCACACCGTGCATCAAGGCGATATCACCAAGTGAAGGCTGGACGTCAGGAGGCTCGACAGTGATCATAGTTGGGGACAACTTCTTCGATGGCCTACAAGTCGTGTTTGGGACCATGCTTGTTTGGAGTGAGCTGATAACATCACACGCGATAAGGGTTCAAACGCCACCTCGACACATCCCTGGAGTTGTTGAAGTCACGTTATCATATAAAAGTAAACAGTTCTGCAAGGGCGCACCGGGGAGATTCGTTTATGTTTCTCTCAACGAGCCCACGATAGATTACGGGTTTCAGCGGCTTCAGAAACTTATACCGAGACACCCAGGCGACCCGGAAAAACTGCCAAAGGAAATCATCCTCAAAAGAGCAGCAGACTTAGCCGAAGCTTTGTACTCCATGCCTCGGAATAACCAGCTCGGGCTCGGCGCACCGAGATCACCTCCTGCTAGCATGCCGTTCAACTCGTATACTGGACAGCTGGCTGTCAGCGTCCAGGATACGGCTGCCTCACAGTGGACTGAAGAGGAGTATGCGCGTAGCGGCGGGTCTGTGTCACCGAGGTATTGTTCCGCCGCGTCTACCCCGCACGCCGCGCCCGCTTCCTACCCGCATCCGCAACACTACCCCGCGCCTCCTACGTCGCTGTTTAACACTACTTCCCTGTCGCTAGGCCCGTACCACCCGGCGAACATGAATGGCCACGTATCTGACCATCACTATAACGCGTATTATATGAAAGATAGCGCGTATTACACTGAAAGAAATGCAGATTCAAAGAGCGATGCTGACTGTCCGGCAAACACTTATGCAAAATGCAGTGGCAGTGATATGAAAGGGGAAGGGGACAAAGGAGCTAAGAGGAGCGCTTTCGCAGTGGTACGACAGAGAATGGGCGGCCTAGTTTCTTCGCCATTCAGTGTCAACCCATTTTCACTGCCGACTTGCAGTGCACAGCAGTACGCTCACACAGCACCCCTGGCGTCCAAGTAG
Protein Sequence
MQVMHFLAYRLEEFRTFRDIGSTSLGTLPFGEDGSFDVCVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPDSNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHVSDHHYNAYYMKDSAYYTERNADSKSDADCPANTYAKCSGSDMKGEGDKGAKRSAFAVVRQRMGGLVSSPFSVNPFSLPTCSAQQYAHTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00634100;
90% Identity
iTF_00895708;
80% Identity
-