Sinc013769.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- kn
- Assembly
- GCA_036419045.1
- Location
- CM071631.1:8881229-8895774[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-142 2.3e-138 463.6 0.0 180 387 9 234 4 239 0.98 2 2 8.3e-08 0.0007 19.5 6.2 418 515 241 345 235 407 0.56
Sequence Information
- Coding Sequence
- ATGATAATTTGCAAACATTTGCTTTGTTACAGATTTTTTCTGAAATTCTTTCTGAAATGCAACCAAAATTGCTTGAAGAACGCTGGCAACCCTCGCGACATGAGACGATTTCAAGTGGTGATATCAACCCAGGTGATGGTGGATGGCCCTTTACTGGCGATATCCGACAACATGTTCGTTCACAACAATAGCAAACACGGCCGCCGCGCGAAACGGCTTGACCCAACTGAAGGTATTGACGCAGCGCCCGAACCTACCTCGGGCCTATACCCACCCCTACCAGTGGCGACGCCTTGCATAAAAGCGATATCGCCCAGTGAAGGTTGGACGTCCGGCGGCTCAACTGTCATCATCGTAGGAGACAACTTTTTTGACGGCCTTCAAGTTGTCTTCGGGACCATGCTTGTTTGGAGCGAGTTAATAACATCCCACGCGATCCGGGTTCAGACGCCGCCGAGACACATACCGGGCGTCGTCGAAGTCACCCTCTCCTACAAGAGCAAGCAATTCTGCAAAGGAGCTCCGGGTAGATTTGTCTACGtttCAGCACTCAACGAGCCCACTATTGACTACGGATTCCAGAGGCTACAAAAACTCATCCCCAGACATCCCGGAGACCCTGAGAAGTTACCGAAGGAAATAATACTGAAGCGAGCTGCAGACCTAGCAGAAGCGTTATACTCGATGCCTCGGAATAACCAACTGGGGCTCAGCGCACCTCGGTCTCCTCCCGCTAGCATGCCTTTTAATTCCTACACTGGCCAGTTGGCCGTCAGCGTGCAGGATACTGCAGCCTCACAGTGGACAGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGGTACTGCTCGGCCGCGTCCACGCCGCACGCCGCGCCCGCCTCCTACCCGCACCCGCAGCACTACCCCGCGCCGCCCACCTCGCTCTTCAATACCTCATCGCTGTCCCTTGGCCCGTATCACCCGGCGAACATGAATGGACATTTATCATCTGACCATCACTATAACGTGTATAACACGAAAGATAGCGGGCATTACGAAAGAAATGGGAATTCTAAGAGCGCTGACTGTCCGGCAAACATTCATCCGAAATGCACGGAGATGAAAGAGGCTCAGTGCAAAGAGGGCAAACTGAGGAGCGCCTTTGCGGTAGTGCGGCAGAGCCCGCCGCGGTCCAATGCTCAGCACCACCAAAACTGGCAGCATCTCGCCGTTCAATGTTAG
- Protein Sequence
- MIICKHLLCYRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLSAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHLSSDHHYNVYNTKDSGHYERNGNSKSADCPANIHPKCTEMKEAQCKEGKLRSAFAVVRQSPPRSNAQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634100;
- 90% Identity
- iTF_00355914;
- 80% Identity
- -