Ladu005818.3
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- kn
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000142.1:304368-314122[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5e-142 2.9e-138 462.1 0.0 182 387 8 231 5 234 0.99 2 3 8e-08 0.00047 19.0 6.4 420 511 240 337 232 403 0.66 3 3 0.039 2.3e+02 0.2 0.8 455 542 328 416 320 430 0.57
Sequence Information
- Coding Sequence
- ATGAAATTGTTAAAAAATATCAGATTTTTCCTGAAATTCTTCCTGAAATGCAATCAAAACTGCTTGAAAAACGCTGGTAATCCTCGGGACATGAGAAGATTTCAAGTGGTAATATCAACGCAAGTTATGGTGGACGGCCCTCTTTTAGCGATATCGGACAACATGTTCGTCCATAACAACAGCAAGCATGGAAGAAGGGCCAAGCGGCTTGACCCCACAGAAGGTACTGACGCCGGCCCTGATGCTCATTCGGGCTTATACCCACCACTACCAGTCGCAACCCCCTGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCCGGAGGTTCCACTGTCATCATAGTGGGTGATAACTTCTTCGACGGCTTGCAAGTTGTCTTCGGAACTATGCTTGTATGGAGTGAGCTGATAACATCTCACGCGATAAGAGTACAAACACCTCCGAGGCACATCCCGGGAGTGGTAGAAGTCACGTTGTCGTATAAGAGTAAACAGTTCTGCAAAGGAGCACCGGGCAGATTCGTTTATGTTTCAGCTCTCAACGAGCCCACGATAGATTACGGTTTTCAGCGGCTTCAGAAACTTATACCGAGACATCCTGGTGATCCGGAGAAATTGCCTAAGGAAATAATACTAAAAAGAGCAGCAGACCTCGCCGAAGCCCTATACTCGATGCCCCGAAACAACCAGCTCGGGCTGGGAGCGCCGAGGTCACCACCAGCGAGCATGCCGTTTAACTCTTACACGGGACAGCTGGCCGTCAGTGTGCAGGACACGGCCGCTTCGCAGTGGACTGAAGAGGAGTATGCGAGGAGCGGCGGGTCGGTGTCTCCGCGGTACTGCTCGGCCGCTTCCACACCGCACGCCGCGCCCGCTTCCTACCCGCATCCACAACACTACCCCGCGCCTCCCACTTCGCTCTTCAATACCACCTCTCTGTCGCTCGGCCCGTACCATCCGTCGAGTATGAATGGCCACGTATCTGACCATCAGTATAACGCCTATTATGCGAAAGATACCGCGTATTACACTGAAAGAAACGCGGATTCTAAGGGTGGTGCCGACTGTCCGGTAAACACTCATGCAAAATGCAGTGGAAGTGATATGAAAGGGGAAGGGCACAAAGGAGCTAAGAAGAGCGCTTTTGCCGTAGTGAGACAGAGTCCACCGCGGGTGGCCAATGTGCAGAGAATGGGCGGTTTGGTGTCATCTCCTTTCAGCATGAATCCATTTTCTCTGCCAACTTGCAGCGCTCAACAATACGCTCAGACTGCGCCGTTGGTTTCCAAGTAG
- Protein Sequence
- MKLLKNIRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAGPDAHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPSSMNGHVSDHQYNAYYAKDTAYYTERNADSKGGADCPVNTHAKCSGSDMKGEGHKGAKKSAFAVVRQSPPRVANVQRMGGLVSSPFSMNPFSLPTCSAQQYAQTAPLVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634100;
- 90% Identity
- iTF_00818146; iTF_00390166; iTF_00909538; iTF_01335715; iTF_01443619; iTF_00406497; iTF_00033609; iTF_00836305; iTF_01172117; iTF_00124954; iTF_00662873; iTF_01208992; iTF_01207899; iTF_00055189;
- 80% Identity
- -