Sgig050912.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- kn
- Assembly
- GCA_963935595.1
- Location
- OZ012553.1:24474914-24484655[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-120 6.3e-116 390.2 0.0 205 387 1 201 1 206 0.98 2 2 5.6e-08 0.0016 19.1 6.3 418 502 208 298 202 373 0.58
Sequence Information
- Coding Sequence
- ATGTGCTATTTCCAGGTGGTGATATCAACACAGGTGATGGTGGATGGCCCTCTGCTGGCGATATCTGACAATATGTTCGTACACAACAACAGCAAGCACGGCCGCCGCGCGAAGCGGCTCGACCCAACTGAAGGTATTGACGCAGCACCCGAGCCCACCTCGGGCCTGTATCCACCCCTTCCAGTAGCGACGCCCTGTATAAAGGCGATATCTCCAAGCGAAGGCTGGACATCGGGCGGGTCAACCGTAATCATAGTAGGGGATAACTTCTTTGACGGCCTGCAAGTCGTCTTCGGAACCATGCTTGTTTGGAGTGAGCTAATAACGTCCCACGCGATCCGAGTTCAGACGCCTCCTAGACACATACCGGGCGTTGTCGAAGTCACCCTATCCTACAAGAGCAAGCAATTCTGTAAAGGCGCGCCTGGCAGATTTGTCTATGTTTCAGCACTCAACGAGCCTACGATTGACTACGGGTTTCAGAGGCTACAAAAACTCATCCCTAGGCATCCTGGCGACCCAGAAAAGTTACCAAAGgaaataatactaaaacgaGCGGCTGACCTAGCAGAAGCGTTATACTCGATGCCCCGCAACAACCAGCTGGGACTCAGCGCGCCTCGGTCGCCTCCCGCCAGCATGCCCTTCAACTCCTACACTGGCCAGCTGGCCGTCAGCGTGCAGGACACTGCAGCGTCTCAGTGGACCGAAGAGGAGTACGCGCGCAGCGGGGGTTCAGTGTCGCCGCGGTACTGCTCGGCCGCGTCCACGCCGCACGCTGCGCCCGCTTCCTACCCGCACCCGCAGCACTACCCCGCGCCGCCCACCTCGCTCTTCAACACGACCTCGCTGTCCCTCGGCCCGTATCACCCGGCGAACATGAATGGACATTTATCATCTGACCATCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACGAAAGAAATGGGAATTCTAAGAGCGCTGACTGTCCGGCAAACATTCATCCGAAATGCACCGAGATGAAAGAGGCTCAGTGCAAAGAGAGCAAACTGAGGAGCGCCTTTGCTGTAGTGCGGCAGAGCCCGCCGCGGTCCAATGCACATCACCACCAAAACTGGCAGCATCTCGCCGTTCAATGTTAG
- Protein Sequence
- MCYFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLSAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDHHYNAYNTKDSGHYERNGNSKSADCPANIHPKCTEMKEAQCKESKLRSAFAVVRQSPPRSNAHHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634100;
- 90% Identity
- iTF_00355914;
- 80% Identity
- -