Drub002792.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila rubida
Gene Symbol
pnr
Assembly
GCA_035046165.1
Location
JAWNOF010000012.1:23246758-23251947[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-18 1.1e-14 53.5 3.2 1 34 161 193 161 195 0.97
2 2 4.1e-19 7.9e-16 57.2 5.8 1 35 218 251 218 252 0.98

Sequence Information

Coding Sequence
ATGGGTATTTTGCTAAGTGATGGCGATTCCACATCGGATCAGCAGTCGACGCGCGATTACCCGCAGTTCAGCGGCGACTATCACAacgtgcagctgcaggtggccgccgtcgccgccagcTCCAAGATgtaccacagcagcagcgccgcagcagctgccgcctaCACGGATCTGGCTGCTGCCGGAGGCGCTGCCAGCGTGTCGGGCTACCACCACCAGCAGGCCGTTAATGCGCCCGTCTACGTGCCCTCCAATCGACAGTACAACCATGTGGCGGCCCATtttggcagcgctgctgctgcccagaaTGCCTGGACTACGGATAGCTTTGGCTCGACGCATGCCCAGCTGCCGGCGCAGTTCTACACACAAAATGCAGTGATGATGGCGCCCTGGCGCAGTGCCTACGATCCGACGGGCTTTCAGCGCTCCTCGCCCTACGAGAGCGCGATGGACTTTCAGTTTGGCGAGGGACGCGAGTGCGTCAACTGCGGCGCCATCTCGACGCCGCTGTGGAGGCGCGACGGCACCGGGCACTATTTGTGCAACGCTTGCGGATTGTATCACAAGATGAACGGCATGAACAGGCCGCTGATCAAGCCCAGCAAGCGACTGGTGAGTGCAACTGCCACGCGGCGCATGGGTCTGTGCTGCACCAACTGCGGCACGCGCACCACAACCCTCTGGAGGcgcaacaacgacggcgagcCGGTGTGCAATGCCTGCGGGCTGTACTTCAAGCTGCACGGCGTCAATCGGCCACTGGCCATGCGCAAGGATGGCATTCAGACGCGCAAACGGAAACCCAAGAAAACAGGCAGCGGCTCAACAGCAGGCACAGCATCGGGATCAGGCTCCACCGCGGAGGCCATCAAGGAGTGCAAGGAGGAGCATGATCTCAAGCCGACGCTTAGCCTGGAACGACACAGCTTGAGCAAGCTCCACACGGATCTGAAGAGCTCACTTGCGAGTAGCACGGCAAGCAGTCTAATGAGCCAACAccatgcccagcagcagcagcagcaacagcagcaacaacagcaacagccaccaCCGTCACATCAGCAATGCTTTCCCCTCTAcggtcagcaacaacagcagcaacaacaacaacagcagcagcagcagcaacagacgcAGCATCCTCAACACAGCCATCAGTCGCAATTGAGTGCAAGGCAGTTGCACGGCGCCGCATCGCAGCTGTATacacccagcagcagctcggccgCCTCTGCCTATACgacgcacagcagcaacgccgcGGACACGCCCACTCTGAGCAACGGCACGCCCTCGCCACActatcagcatcatcatctgCATGCGGCCGCCACGGGCAGCTCCCATGGTCATCATGCAGCGGCGGCGCATCACCACATAcatgccgctgcagcagccgccgcgtATGGAGTGAAGACGGAGGCGAGTGCCACCAACTATGACTATGTGAATAACTGCTACTTTGGCGCCTCGTTTGGGGCACTGGGCGGAGCTGCCACGTCGGCGATGGCGGGCGGCGCGAGTAACGAGCTGGCGGGCTATCATCACCAGCACAATGTCATACAGGCGGCCAAACTGATGGCCACATCGTGA
Protein Sequence
MGILLSDGDSTSDQQSTRDYPQFSGDYHNVQLQVAAVAASSKMYHSSSAAAAAAYTDLAAAGGAASVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDSFGSTHAQLPAQFYTQNAVMMAPWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSTAGTASGSGSTAEAIKECKEEHDLKPTLSLERHSLSKLHTDLKSSLASSTASSLMSQHHAQQQQQQQQQQQQQPPPSHQQCFPLYGQQQQQQQQQQQQQQQQTQHPQHSHQSQLSARQLHGAASQLYTPSSSSAASAYTTHSSNAADTPTLSNGTPSPHYQHHHLHAAATGSSHGHHAAAAHHHIHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAATSAMAGGASNELAGYHHQHNVIQAAKLMATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00529221; iTF_00472714; iTF_00562839; iTF_00537893; iTF_00614565; iTF_00509478; iTF_00523334; iTF_00507272; iTF_00576002; iTF_00554059; iTF_00521007; iTF_00496246; iTF_00549210; iTF_00561404; iTF_00547722; iTF_00582620; iTF_00595613; iTF_00494047; iTF_00534242; iTF_00602242; iTF_00585622; iTF_00528451; iTF_01556483; iTF_00559877; iTF_00549926; iTF_00544877; iTF_00516654; iTF_00477009; iTF_00599966; iTF_00532767; iTF_00545632; iTF_00573705; iTF_00540753; iTF_00547025; iTF_00572977; iTF_00510196; iTF_00568631; iTF_00502907; iTF_00479836; iTF_00551965; iTF_00473443; iTF_00513118; iTF_00520288; iTF_00593509; iTF_00497035; iTF_00559148; iTF_00598540; iTF_00558318; iTF_00608844; iTF_00584089; iTF_00806350; iTF_00554735; iTF_01320847; iTF_01321569; iTF_01326052; iTF_01323045; iTF_01326821; iTF_01328261; iTF_00522600; iTF_00525545; iTF_00597807; iTF_01327539; iTF_01322299; iTF_00513840; iTF_00530609; iTF_00531345; iTF_00563555; iTF_00491173; iTF_00617286; iTF_00506516; iTF_00534973; iTF_00526968; iTF_00538621; iTF_00521810; iTF_00482643; iTF_00610300; iTF_00574462; iTF_00508755; iTF_00576723; iTF_00542100; iTF_00567917; iTF_00557557; iTF_00589205; iTF_00804039; iTF_01570607; iTF_00805628; iTF_00803262; iTF_00500694; iTF_00565030; iTF_00511661; iTF_00569368; iTF_00471270; iTF_00493305; iTF_00535713; iTF_00518818; iTF_00502179; iTF_00586343; iTF_00497801; iTF_00583337; iTF_00499248; iTF_00611057; iTF_00577428; iTF_00607476; iTF_00552693; iTF_00499958; iTF_00560695; iTF_00616567; iTF_00620248; iTF_00517369; iTF_00544122; iTF_00596314; iTF_00498526; iTF_00542814; iTF_00567194; iTF_01356506; iTF_00901896; iTF_00832567; iTF_00486235; iTF_00570769; iTF_00519579; iTF_01549937; iTF_00495520;
90% Identity
iTF_00534242; iTF_00563555; iTF_00617286; iTF_00491173; iTF_00506516; iTF_00529221; iTF_00576002; iTF_00537893; iTF_00614565; iTF_00569368; iTF_00471270; iTF_00509478; iTF_00523334; iTF_00586343; iTF_00602242; iTF_00585622; iTF_00507272; iTF_00554059; iTF_00598540; iTF_00595613; iTF_00513118; iTF_00599966; iTF_00558318; iTF_00608844; iTF_00806350; iTF_00521007; iTF_01570607; iTF_00530609; iTF_00531345; iTF_00611057; iTF_00542100; iTF_00567917; iTF_00589205; iTF_00496246; iTF_00562839; iTF_00472714; iTF_00493305; iTF_00584089; iTF_00519579; iTF_00561404; iTF_00547722; iTF_00805628; iTF_00804039; iTF_00803262;
80% Identity
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