Dfla013031.1
Basic Information
- Insect
- Drosophila flavopinicola
- Gene Symbol
- pnr
- Assembly
- GCA_035042425.1
- Location
- JAWNLL010000459.1:2643867-2646968[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-18 1.1e-14 53.7 3.2 1 34 104 136 104 138 0.97 2 2 4e-19 8e-16 57.4 5.8 1 35 161 194 161 195 0.98
Sequence Information
- Coding Sequence
- ATGtatcacagcagcagcgccgctgCAGCGGCCGCCTACACGGATCTGGCCGCCGCCGGGGGCGCTGCCAGCGTCTCTGGCTATCACCATCAGCAGGCGGTCAATGCGCCCGTCTACCGCTGCAGCGGCCCAGAATGCCTGGGCGACGGACGGATTCGGTTCGGCGCAGCGCAGCTGCCGGCGCAGTTCTATTCACAGAATGCCGCTGTCATGATGGCGCCGTGGCGCAGCGCCTATGATCCGACTGGATTTCAGCGCTCCTCGCCCTACGAGAGCGCCATGGACTTTCAGTTCGGCGAGGGACGCGAGTGCGTCAACTGTGGCGCCATCTCCACGCCACTGTGGCGGCGCGACGGCACTGGCCACTATCTGTGCAACGCTTGCGGACTGTATCACAAGATGAACGGCATGAACCGGCCACTGATCAAGCCCAGCAAGCGACTGGTGAGTGCAACTGCCACGCGTCGTTTGGGCCTGTGCTGCACCAACTGTGGCACACGCACCACCACACTGTGGCGGCGCAACAACGATGGTGAGCCTGTGTGCAACGCCTGCGGCCTCTACTTCAAGCTGCACGGCGTCAATCGGCCACTGGCCATGCGCAAGGATGGCATTCAGACGCGCAAGCGGAAGCCCAAGAAAACAGGCAGCGGCTCCACGACGGCTACGGGTTCCGGATCCACCTCCACCACAGAGGCCATCAAGGAGTGCAAGGAGGAGCACGATCTCAAGCCCACGCTTAGCCTGGAACGACACAGTCTGAACAAGCTGCATACGGATCTGAAGAGCACACTGGCCGGCAGCGTGGCCAGCAGCCTGATGGGCCAGCATcatgcccagcagcaacagcagcagcagcagcagcaatcgtcGACGCCGTCGCATCAGCAATGCTTTCCGCActacgcccagcagcagcagcaccagcagcaacagcaggcgcagcagcaggcgcagcagcaggcgcagcatcagcagcacagCCACCAATCGCAGCTGAGTGGCCGGCAACTGCACGGAGCCGGCTCCCAGCTGTatacgcccagcagcagctcggccGCCTCCGCGTATACGACGCACAGCAGCGCGGACACGCCCACGCTGAGCAACGGCACGCCCTCGCCGCACTATCAGCACCATCACTTGCATGCGGCGGCTGCGGCAAGCAGCTCGCATGGGCATCATGCGGCAGCGGCACATCATCATATACACGCggctgccgcagctgcagcttatGGGGTCAAAACGGAGGCGAGTGCCACCAACTATGACTATGTGAACAACTGTTATTTTGGTGCATCGTTCGGTGCACTGGGCGGGGCGGCATCCTCGGCGATGGCTGGCGGTGCGGGCAGCGATCTGGCCGGGTACCATCATCAGCACAATGTCATCCAGGCCGCCAAGCTGATGGCGACATCCTGA
- Protein Sequence
- MYHSSSAAAAAAYTDLAAAGGAASVSGYHHQQAVNAPVYRCSGPECLGDGRIRFGAAQLPAQFYSQNAAVMMAPWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSTTATGSGSTSTTEAIKECKEEHDLKPTLSLERHSLNKLHTDLKSTLAGSVASSLMGQHHAQQQQQQQQQQSSTPSHQQCFPHYAQQQQHQQQQQAQQQAQQQAQHQQHSHQSQLSGRQLHGAGSQLYTPSSSSAASAYTTHSSADTPTLSNGTPSPHYQHHHLHAAAAASSSHGHHAAAAHHHIHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAASSAMAGGAGSDLAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589912;
- 90% Identity
- -
- 80% Identity
- -