Dpar012808.1
Basic Information
- Insect
- Drosophila parthenogenetica
- Gene Symbol
- pnr
- Assembly
- GCA_035047505.1
- Location
- JAWNPM010000183.1:3826565-3831712[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-18 1.4e-14 53.5 3.2 1 34 160 192 160 194 0.97 2 2 5.7e-19 1e-15 57.1 5.8 1 35 217 250 217 251 0.98
Sequence Information
- Coding Sequence
- ATGGGCATTTTGCTAAGTGATGGCGATTCGACATCGGATCAGCAGTCGACGCGTGACTATCCGCAGTTCAGCGACGACTATCACAACGTTCAGCTGCAGGTGGCCGCCGTCGCCGCCAGCTCCAAGATGTatcacagcagcagcgccgCGGCAGCTGCCGCCTACACGGATCTCGCCGCGGCCGGTGGAGCTGCTGGTGTGTCCGGCTATCATCACCAGCAGGCGGTGAATGCACCCGTCTATGTGCCCTCCAATCGTCAATACAATCACGTTGCTGCCCACTTTGGCAGTGCGGCTGCACAGAATGCCTGGCCAACGGATAGCTTTGGATCGCCACATGGTCAGCTGCCCGCACAGTTTTACACACAAAATGCAGTGATGATGGCTCCGTGGCGCAGTGCCTACGATCCGACGGGATTTCAACGTTCTTCGCCATATGAGAGCGCCATGGACTTTCAGTTTGGCGAGGGACGCGAGTGTGTCAACTGCGGCGCCATTTCGACGCCACTGTGGAGACGCGACGGTACAGGTCACTATCTGTGCAATGCTTGCGGACTGTATCACAAGATGAACGGCATGAACAGGCCGCTGATCAAGCCCAGCAAGCGACTGGTGAGTGCAACGGCCACACGCCGCATGGGCCTCTCCTGCACCAACTGCGGCACCCGCACCACAACGCTCTGGAGGCGCAACAATGACGGCGAACCAGTGTGCAATGCATGCGGACTCTACTTTAAGCTCCACGGCGTAAATCGACCCTTGGCCATGCGCAAGGATGGCATCCAGACACGTAAAAGAAAGCCCAAGAAGACTGGCAGTTCCTCCACAGCAGGCACTGGTTCGGGATCGGGATCGGGCTCTGCCAATGAGACCATCAAGGAGTGCAAGGAGGAGCATGATCTCAAGCCCTCGCttagtcacagtcacagtctgAGCAAATTGCATACGGATCTAAAGAGCACACTGGCGAGCAGTGCAGCGAGCAGTTTGATGAGCCAACATCAtacgcagcaacagcagcagcaacaacagcagcagcaacagcagcaaccgccACCGTCACACCAGCAATGCTTTCCTCTCTacgcccagcagcagcaacaacagcagcaacaacaacaacagcagcaacaggcacaGTCACAGCATTCGCAGCACAGTCATCAGGCGCAACTAAGTGCGAGACagttgcatgcaacagcaTCGCAGCTGTACACGCCCAGCAGTAGCTCAGCGGCATCCGCCTATACGACGCACAGCAGCAATGCGCCGGACACGCCCACATTGAGCAATGGCACGCCCTCGCCACActatcagcatcatcatcatctgcatgccgccgccgctgctgccacaAGCAGCTCACATGGCCAtcatgcagcagcagctcatcatcatctgcatgctgcggcggcagcagctgcctaTGGGGTCAAGACGGAGGCGAGTGCCACCAACTATGACTATGTGAATAACTGTTACTTTGGCGCCTCGTTTGGCGCGCTGGGCGGAGCAGCGACATCAGCGATGGCGGGTGGAACGAGCAGCGAATTGGCCGGATATCATCATCAGCACAATGTCATACAGGCCGCTAAGCTGATGGCCACATCCTGA
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPQFSDDYHNVQLQVAAVAASSKMYHSSSAAAAAAYTDLAAAGGAAGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWPTDSFGSPHGQLPAQFYTQNAVMMAPWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLSCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSSSTAGTGSGSGSGSANETIKECKEEHDLKPSLSHSHSLSKLHTDLKSTLASSAASSLMSQHHTQQQQQQQQQQQQQQPPPSHQQCFPLYAQQQQQQQQQQQQQQQAQSQHSQHSHQAQLSARQLHATASQLYTPSSSSAASAYTTHSSNAPDTPTLSNGTPSPHYQHHHHLHAAAAAATSSSHGHHAAAAHHHLHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAATSAMAGGTSSELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589912;
- 90% Identity
- iTF_00589912;
- 80% Identity
- -