Dmel012644.1
Basic Information
- Insect
- Drosophila melanocephala
- Gene Symbol
- pnr
- Assembly
- GCA_037043625.1
- Location
- JBAMBD010000743.1:3609715-3611585[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-18 9.9e-15 53.8 3.2 1 34 87 119 87 121 0.97 2 2 3.4e-19 7.2e-16 57.4 5.8 1 35 144 177 144 178 0.98
Sequence Information
- Coding Sequence
- ATGtatcacagcagcagcgccgctGCAGCGGCCGCCTACACGGATCTGGCCGCCGCCGGGGGCGCTGCCAGCGTCTCTGgctatcatcatcagcaggcCGTCAATGCGCCCGTCTATGTGCCCTCCAATCGTCAATACAATCACGTTGCGGCGCATTTCGGCAGTGCAGCAGCGGCCCAGAATGCCTGGACAACGGATGGCTTTGCGCTCCTCCCCTACGAGAGTGCCATGGACTTTCAGTTTGGCGAGGGACGCGAGTGCGTCAACTGTGGGGCGATTTCCACACCGCTTTGGAGGCGGGATGGCACCGGACACTATCTATGCAACGCTTGCGGACTGTATCACAAGATGAACGGCATGAACCGGCCGCTGATCAAGCCCAGCAAGCGACTGGTGAGTGCAACTGCCACGCGGCGATTGGGGCTGTGTTGCACCAACTGTGGCACTCGCACTACAACCCTTTGGCGGCGTAACAATGACGGCGAACCCGTCTGTAATGCCTGTGGCCTCTACTTCAAGCTGCATGGCGTCAATCGTCCATTGGCGATGCGCAAGGATGGCATCCAGACACGCAAGCGGAAGCCCAAGAAAACAGGCAGCGGCTCCACAACGACAAGTGGCTCGGGATCCGGCTCTAACACGGAGGCCATCAAGGACTGCAAGGAGGAGCATGATCTCAAGCCCACGCTTAGCCTGGAACGACACAGTCTCAACAAGCTGCATACGGATCTGAAGAGCACTTTGGCGGGCAGCGTGGCCAGCAGTCTGATGGGGCAGCATcatgcccagcagcaacagcagcagcagcagccgcagcaacagccagTACCGTCGCATCAGCAATGCTTTCCTCACTacgcacagcagcaacaacagcagcagcagcaacaacagcaacagcagcaggcacagcatcagcagcatagCCACCAATCGCAGCTGAGTGTGCGGCAGTTGCATGGCGCCAGTTCGCAGCTGTAtacggccagcagcagctcggcAGCCTCCGCGTATACGACGCACAGCAGCAATGCGGCGGACACGCCCACATTGAGCAACGGCACGCCCTCGCCACACTATCAGCACCATCATTTGCatgcggcggcggcagccaGCAGTTCGCATGGACATCATGCGGCTGCAGCTCATCATCATATACATgcggcagccgcagccgcagcgtATGGCGTCAAGACGGAGGCGAGTGCCACCAACTATGACTATGTGAACAACTGTTATTTTGGGGCATCGTTTGGAGCACTGGGCGGAGCGGCCTCCTCGGCGATGGCGGGTGGGGCGACCAGTGATCTGGCTGGCTATCATCATCAGCACAATGTCATCCAGGCCGCCAAGCTGATGGCGACGtcctga
- Protein Sequence
- MYHSSSAAAAAAYTDLAAAGGAASVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDGFALLPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSTTTSGSGSGSNTEAIKDCKEEHDLKPTLSLERHSLNKLHTDLKSTLAGSVASSLMGQHHAQQQQQQQQPQQQPVPSHQQCFPHYAQQQQQQQQQQQQQQQAQHQQHSHQSQLSVRQLHGASSQLYTASSSSAASAYTTHSSNAADTPTLSNGTPSPHYQHHHLHAAAAASSSHGHHAAAAHHHIHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAASSAMAGGATSDLAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589912;
- 90% Identity
- iTF_01328261;
- 80% Identity
- -