Dhyd011966.1
Basic Information
- Insect
- Drosophila hydei
- Gene Symbol
- pnr_1
- Assembly
- GCA_003285905.2
- Location
- NW:4499881-4505847[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 8.9e-15 53.5 3.2 1 34 161 193 161 195 0.97 2 2 3e-19 6.4e-16 57.2 5.8 1 35 218 251 218 252 0.98
Sequence Information
- Coding Sequence
- ATGGGAATTTTGCTAAGTGATGGCGATTCGACCTCGGATCAACAATCAACGCGTGACTATCCGCAGTTGAGCGGCGACTACCACAACGTGCAGCTGCAGGtggccgccgtcgctgccagcTCCAAGATGtatcacagcagcagcgctgctgcggctgccgcctATACGGAtttggctgcagctggaggagcCGCCGGCGTCTCTGGCTATCATCATCAGCAAGCGGTCAATGCGCCCGTCTATGTGCCCTCCAATCGGCAATACAATCACGTGGCGGCGCATTTCGGCAGTGCTGCAGCGGCCCAGAACGCCTGGACAACGGATAGCTTTGGATCGGCGCATGCGCAGCTACCGGCACAGTTCTATACACAAAACGCGGTTATGATGGCACCCTGGCGTAGTGCCTACGATCCAACTGGCTTTCAGCGCTCCTCTCCTTACGAGAGCGCCATGGACTTTCAGTTTGGCGAGGGGCGCGAGTGCGTCAACTGCGGTGCCATCTCCACGCCGCTTTGGAGACGTGACGGCACCGGCCACTATCTCTGCAACGCTTGCGGCCTATATCACAAGATGAACGGCATGAACCGGCCATTGATAAAGCCCAGCAAGCGACTGGTGAGTGCAACCGCTACACGTCGCCTAGGACTGTGCTGCACAAACTGTGGCACACGCACGACCACACTCTGGAGACGAAACAACGACGGCGAGCCAGTGTGCAATGCCTGTGGACTCTACTTCAAACTGCACGGCGTCAATCGGCCGCTGGCTATGCGCAAGGACGGCATTCAGACCCGCAAGCGGAAGCCCAAGAAAACAGGCAGCGGCTCCACTGCGGGCTCTAATTCGGGATCGGGCTCAACCACAGAGACCATCAAGGAGTGCAAGGAGGAGCATgATCTCAAGCCCACGCTTAGCCTGGAACGCCACAGTCTGAGCAAGCTTCACACGGATATGAAGACCAGCAGCCTTATGGGGCAGCACCTTagccagcagccgcagcagcagccggtgGCGTCGCATCAGCAATGCTTTCCACATTATGccctgcagcaacagcagcaacagcagcagcagcaacaacagcagcaacaacagcagcagcagcaacaacaccagcatcagcaactCGGCCACCAATCGCAATTAAGTGCAAGGCAGTTGCATGCAGCCAGCTCGCAGTTGTATACACCCGGCAGCAGTTCCGCTGCCTCTGCGTATACGACGCACAGCAGTAATGCGGCAGACACGCCCACACTAAGCAACGGCACGCCCTCGCCGCACTATCAACACCATCATTTGACCAGCAGCTCGCATGGCCACCATGCCACAGCAGCGCATCATCATCtacacgcagcagcagcagctgcggcataCGGCGTGAAGACAGAGGCAAGTGCCACCAATTATGACTATGTGAACAACTGTTACTTTGGCGCCTCGTTTGGTGCCTTGGGCGGTGCTGCCTCCTCGGCAATGGCCGGTGGGGCGAGCGGCGATCTGGCCGGGTATCATCATCAGCACAATGTCATCCAGGCAGCCAAGCTGATGGCCACATCCTGA
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPQLSGDYHNVQLQVAAVAASSKMYHSSSAAAAAAYTDLAAAGGAAGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDSFGSAHAQLPAQFYTQNAVMMAPWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSTAGSNSGSGSTTETIKECKEEHDLKPTLSLERHSLSKLHTDMKTSSLMGQHLSQQPQQQPVASHQQCFPHYALQQQQQQQQQQQQQQQQQQQQQHQHQQLGHQSQLSARQLHAASSQLYTPGSSSAASAYTTHSSNAADTPTLSNGTPSPHYQHHHLTSSSHGHHATAAHHHLHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAASSAMAGGASGDLAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589912;
- 90% Identity
- iTF_00573705; iTF_00547025; iTF_00572977; iTF_00510196; iTF_00502907; iTF_00473443; iTF_00554735; iTF_00540753; iTF_00568631; iTF_00559877; iTF_00544877; iTF_00516654; iTF_00477009; iTF_00532767; iTF_00545632; iTF_00479836; iTF_00551965; iTF_00494047;
- 80% Identity
- -