Dlim012017.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- pnr
- Assembly
- GCA_963924055.1
- Location
- OZ001352.1:11010020-11012626[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-18 1.8e-14 53.7 3.2 1 34 117 149 117 151 0.97 2 2 4.1e-19 1.3e-15 57.3 5.8 1 35 174 207 174 208 0.98
Sequence Information
- Coding Sequence
- ATGTaccacagcagcagcgccGCGGCAGCCGCCGCCTACACGGATCTGGCCGCAGCCGGAGGCGCCGCCAGCGTCTCGGGGTACCATCATCAGCAGGCGGTCAATGCGCCCGTCTACGTGCCCTCCAACCGGCAGTACAACCACGTGGCGGCGCATTTCGGCAGTGCAGCTGCCCAGAATGCCTGGACAACGGACGGCTTTGGATCGGCGCATGCTCAGTTGCCGGCACAGTTTTACACCCAAAATGCAGTGATGATGGCGCCTTGGCGCAGCTACGACCCGACGGGATTTCAGCGCTCCTCGCCCTACGAGAGCGCCATGGACTTTCAGTTCGGCGAGGGACGCGAGTGCGTCAACTGTGGCGCCATCTCGACGCCACTGTGGAGGCGCGACGGCACAGGGCACTATCTGTGCAACGCTTGCGGCCTGTATCACAAGATGAACGGCATGAACAGGCCGCTGATCAAGCCCAGCAAGCGACTGGTGAGTGCAACCGCCACTCGCCGCTTGGGACTCTGTTGCACCAACTGTGGCACGCGAACCACGACACTCTGGAGGCGCAACAACGATGGGGAGCCCGTGTGCAATGCCTGCGGTCTCTACTTCAAGCTGCACGGCGTCAATCGACCACTGGCCATGCGCAAGGATGGCATCCAGACCCGCAAGCGGAAGCCCAAGAAAACTGGCAGCAGCTCAACAGCGGGCTCAGGATCCGGATCCACCGCTGAGACCATCAAAGAGTGCAAGGAGGAGCATGATCTCAAGCCCTCGCTTAGCCTGGAACGGCACAGCCTGAGCAAGCTGCATACGGATCTGAAGAGCACACTGGCGAGCAGCGCCGCCAGCAGTTTAATGAGCCAGCATCatgcccagcagcagcaacagcaacaacaacagcaacagccgccGCAGACACATCAGCAATGCTTTCCCCTATacgcacagcaacaacagcaacagcagcagcaacaacagcaacaacaacaacagcaacaacagcatcctCAGCACAGTCATCAGTCGCAGTTGAGTACGAGGCAGTTGCATGGAGCAGTCGCATCGCAGCTCTACACGCCCAGCAGCAGCTCTGCCGCCTCTGCGTATACGACGCACAGCAGCAATGCCCCGAACACGCCCACACTGAGCAACGGGACGCCCTCGCCACACTATCAACACCATCACCTGcatgccgccgccgccgcgaGCAGCTCCCATGGCCATCATGCGGCGGCTGCGGCTCATCATCATATTCATGCCGCTGCCGCGGTTGCTGCCTATGGGGTCAAGACGGAGGCGAGTGCCACAAACTATGATTACGTGAATAACTGTTACTTTGGTGGCTCGTTTGGGGCATTGGGCGGAGCGGCTACGTCGGCGATGGCGGGTGGAGCGAGCAGCGAATTAGCCGGGTATCATCATCAGCACAATGTCATTCAGGCTGCCAAGCTGATGGCCACATCCTGA
- Protein Sequence
- MYHSSSAAAAAAYTDLAAAGGAASVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWTTDGFGSAHAQLPAQFYTQNAVMMAPWRSYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSSSTAGSGSGSTAETIKECKEEHDLKPSLSLERHSLSKLHTDLKSTLASSAASSLMSQHHAQQQQQQQQQQQPPQTHQQCFPLYAQQQQQQQQQQQQQQQQQQQHPQHSHQSQLSTRQLHGAVASQLYTPSSSSAASAYTTHSSNAPNTPTLSNGTPSPHYQHHHLHAAAAASSSHGHHAAAAAHHHIHAAAAVAAYGVKTEASATNYDYVNNCYFGGSFGALGGAATSAMAGGASSELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589912;
- 90% Identity
- iTF_00589912;
- 80% Identity
- -