Dkan006541.1
Basic Information
- Insect
- Drosophila kanekoi
- Gene Symbol
- pnr
- Assembly
- GCA_037075305.1
- Location
- JBAMCE010000271.1:8189055-8196035[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-18 1.3e-14 53.5 3.2 1 34 162 194 162 196 0.97 2 2 4.5e-19 9.4e-16 57.2 5.8 1 35 219 252 219 253 0.98
Sequence Information
- Coding Sequence
- atggGCATTTTGCTAAGTGATGGCGATTCGACCTCGGATCAGCAGTCAACGCGTGACTATCCGCAGTTGAGCGGCGACTATCACAACGTGCAGCTACAggtcgccgccgtcgctgccagcTCCAAGATGtatcacagcagcagcgccgctgCAGCGGCCGCCTACACAGACTTGGCCGCTGCCGGGGGCGCTGCCAGCGTCTCCGGCtatcatcatcagcaggcGGTCAATGCGCCCGTCTATGTGCCCTCCAATCGCCAATATAACCACGTGGCGGCACATTTCGGCAGTGCCGCAGCTGCACAGAATGCCTGGACAACGGATAGTTTTGGATCGGCGCATGCGCAGCTGCCGGCGCAGTTCTATACACAGAACGCAGCTGTCATGATGGCGCCCTGGCGCAGCGCATACGATCCAACTGGCTTTCAGCGCTCCTCCCCCTATGAGAGCGCCATGGACTTTCAGTTCGGCGAGGGGCGCGAATGCGTCAACTGTGGTGCCATCTCCACGCCACTTTGGCGACGCGACGGCACCGGCCACTATCTCTGCAACGCTTGCGGACTGTATCACAAGATGAACGGCATGAACCGGCCGTTGATAAAGCCCAGCAAGCGACTGGTGAGTGCAACCGCCACGCGTCGACTAGGCTTGTGCTGTACGAACTGTGGCACTCGCACCACCACGCTCTGGAGGCGCAACAACGATGGGGAGCCAGTGTGCAATGCCTGTGGCCTCTACTTCAAGCTGCACGGCGTCAACCGGCCACTGGCCATGCGCAAGGATGGCATCCAGACTCGCAAGCGAAAGCCCAAGAAAACAGGCAGCGGCTCCACAGCGGGAACTGGTTCGGGATCGGGATCTACCACGGAGGCCATCAAGGAGTGCAAGGAAGAGCATGATCTCAAGCCCACGCTTAGCCTGGAACGACACAGTCTCAACAAGCTGCATACGGATCTGAAGAGCTCGCTGGCCGGCAGTGCGGTCAGCAGCCTAATGGGGCAGCATCACagccagcagccgcaacagcagttGGCACCGTCACATCAGCAATGCTTTCCACACTACgcccagcagcaccagcagcaacaacagcagcaacagcagcagtcgcagcaccAACACCTCAGCCACCAATCCCAGCTGAGTGCCAGGCAGTTGCATGGAGCCGGCTCGCAGCTGTacacgcccagcagcagctccgctGCCTCCGCGTACACGACGCACAGCAGCAACGCCGCAGACACGCCCACACTAAGCAACGGCACGCCCTCGCCTCACTATCAACACCATCATTTgcacgccgccgccgcggcgAGCAGCTCGCATGGACACCATGCAGCGGCGGCTCATCACCACATACACgcggccgcagcagccgcggcaTATGGCGTCAAAACGGAGGCGAGTGCTACCAATTATGACTATGTGAACAACTGCTATTTCGGGGCCTCGTTTGGGGCCCTGGGTGGAGCCGCCTCCTCGGCAATGTCTGGAGGGGCGACCAGCGATCTGGCCGGGTACCACCATCAGCACAATGTCATCCAGGCCGCCAAGCTGATGGCGACGTCCtga
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPQLSGDYHNVQLQVAAVAASSKMYHSSSAAAAAAYTDLAAAGGAASVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMAPWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSTAGTGSGSGSTTEAIKECKEEHDLKPTLSLERHSLNKLHTDLKSSLAGSAVSSLMGQHHSQQPQQQLAPSHQQCFPHYAQQHQQQQQQQQQQSQHQHLSHQSQLSARQLHGAGSQLYTPSSSSAASAYTTHSSNAADTPTLSNGTPSPHYQHHHLHAAAAASSSHGHHAAAAHHHIHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAASSAMSGGATSDLAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589912;
- 90% Identity
- iTF_01328261;
- 80% Identity
- -