Basic Information

Insect: Scaptomyza tumidula
Gene Symbol: pnr
Assembly: GCA_035044465.1
Location: JAWNNW010000446.1:1478682-1480918[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 7e-18 1.1e-14 53.7 3.2 1 34 119 151 119 153 0.97

2 2 5e-19 8e-16 57.3 5.8 1 35 176 209 176 210 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	7e-18	1.1e-14	53.7	3.2	1	34	119	151	119	153	0.97
2	2	5e-19	8e-16	57.3	5.8	1	35	176	209	176	210	0.98

Sequence Information

Coding Sequence: ATGTATCACAGCAGCAGTgccgcagcagctgccgccTACACGGATCTCGCAGCTGCCGGTGGCGCTGCCGGTGTGTCGGgctatcatcatcagcagGCGGTGAATGCGCCCGTCTATGTGCCCTCCAATCGACAGTACAATCATGTGGCGGCTCACTTTGGCAGCGCTGCAGCGGCACAGAACGCCTGGACAACTGATGGATTTGGCTCAGCGCATGCTCAATTACCGGCACAGTTCTATACACAAAATGCTGCGGTGATGATGGCACCATGGCGCTCATACGATCCAACTGGGTTTCAACGCTCCTCGCCCTACGAGAGCGCCATGGACTTTCAGTTTGGCGAGGGACGCGAGTGCGTCAATTGCGGTGCCATCTCCACGCCACTTTGGCGACGTGATGGTACCGGTCACTATCTGTGCAACGCTTGCGGACTGTATCACAAAATGAACGGCATGAATAGGCCGCTGATCAAGCCCAGCAAGCGACTGGTGAGTGCAACTGCCACTCGGCGTTTGGGCTTGTGTTGCACAAACTGTGGCACACGCACCACTACACTCTGGCGGCGCAACAACGATGGTGAGCCCGTTTGCAATGCCTGTGGCCTCTACTTTAAGCTTCATGGCGTTAATCGTCCACTGGCCATGCGCAAAGATGGCATTCAGACGCGCAAGCGGAAGCCCAAAAAAACAGGCAGCGGGGGATCCACAACGACAAGTGGTTCGGGATCTGGCTCCAACACAGAAGCCATCAAGGAGTGCAAGGAGGAGCACGATCTGAAACCTACGCTTAGCCTAGAACGACACAGTCTCAGCAAGTTGCATACGGATTTAAAGAGCACATTGGCCGGCAGTGTGGCTAGCAGTCTGATGGGCCAGCATCAtgcccagcaacagcagcagcaacagcaacaaccaataCCATCCCATCAGCAATGCTTTCCACACTacgcacagcagcaacaacaacaacagcatcaacagcagcagcaacaacaacagcaacagcatcagcaacataGCCACCAGTCACAGCTGAGTGCTCGGCAGTTGCATGGCGCTGGATCACAGCTATATACGCCCAGCAGCAGCTCAGCCGCCTCCGCTTATACAACGCACAGCAGCAATGCGGCAACAGACACGCCCACTCTCAGCAATGGCACGCCCTCGCCGCACTACCAACACCATCATTTGCATGCGGCAAGCAGTTCGCATGGACACCATGCGGCGGCAGCTCACCATCATATACAtgccgccgcagcagcagcagcttatgGCGTCAAAACGGAGGCTAGTGCCACCAACTATGATTATGTGAATAACTGTTATTTTGGTGCATCGTTTGGTGCACTTGGTGGAGCAGCATCATCGGCGATGGCTGGTGGGACGACCAGCGATCTGGCCGGCTATCATCATCAGCACAATGTCATCCAGGCCGCAAAGCTGATGGCAACATcctga
Protein Sequence: MYHSSSAAAAAAYTDLAAAGGAAGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDGFGSAHAQLPAQFYTQNAAVMMAPWRSYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTGSGGSTTTSGSGSGSNTEAIKECKEEHDLKPTLSLERHSLSKLHTDLKSTLAGSVASSLMGQHHAQQQQQQQQQPIPSHQQCFPHYAQQQQQQQHQQQQQQQQQQHQQHSHQSQLSARQLHGAGSQLYTPSSSSAASAYTTHSSNAATDTPTLSNGTPSPHYQHHHLHAASSSHGHHAAAAHHHIHAAAAAAAYGVKTEASATNYDYVNNCYFGASFGALGGAASSAMAGGTTSDLAGYHHQHNVIQAAKLMATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00589912;
90% Identity: iTF_01321569; iTF_01326052; iTF_01326821; iTF_01320847; iTF_00565030; iTF_00535713; iTF_00502179; iTF_00528451; iTF_00593509; iTF_00522600; iTF_00497801; iTF_00525545; iTF_00583337; iTF_00497035; iTF_00511661; iTF_00499248; iTF_00513840; iTF_00521810; iTF_00597807; iTF_00482643; iTF_00559148; iTF_00610300; iTF_00574462; iTF_00576723; iTF_00577428; iTF_00607476; iTF_00552693; iTF_00557557; iTF_00499958; iTF_00518818; iTF_00500694; iTF_00560695; iTF_00616567; iTF_00620248; iTF_00517369; iTF_00544122; iTF_00549210; iTF_00567194; iTF_00596314; iTF_00486235; iTF_00570769; iTF_00538621; iTF_00498526; iTF_00542814; iTF_00495520; iTF_01327539; iTF_00526968; iTF_01322299; iTF_00582620;
80% Identity: -