Dfla003243.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila flavopinicola
Gene Symbol
ftz-f1
Assembly
GCA_035042425.1
Location
JAWNLL010000138.1:297370-315966[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.9 1.1e+04 -4.6 21.6 37 167 20 150 4 173 0.53
2 3 2.2e-19 1.3e-15 57.7 0.3 1 79 315 392 315 426 0.75
3 3 5.5e-72 3.3e-68 231.0 1.5 157 408 524 769 479 771 0.87

Sequence Information

Coding Sequence
ATGTTATTAGAAATGGATCAACAACAGGCGACAGTACAGTTTATATCGTCGCTGAATCTGTCGCCGTTTAGCATGCAGCttgagcaacagcagccagcaagtCCAGCGCacagcaacactaacaacaacaacaacaatagtagcaacagcaacaacaacaacgataacgaTACAAATGCTTTGAGCAGTGCCGATAACGATTACAGCGCCTACACGCTGCAATTGGGCactcaccagcagcagcaacagcagcagcagcatcacagCACgcatcaccagcagcagcagcagcagcaacaacaacaacaacaacattaccagcagcaacaacagaatattgccaacaacaatgcgaacGCAGCGAACCAATTCAACGCCTCCTCCTATTCGTACATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTATCAGGAGACAAACTCGTCTCATTCGCAGCAAAGCGCAAACGGTGCAGGCaatgcagcagctggaaaCTCCAGCCAGCTGCTGAATGGTGGCGGCACCTCCGCAGGCAATGGCTACATGCTGCTGCCACCAGGCGCCAGCGGCACCtcggctgctgccgccgcccacATGTCCGGCAGTGTGGGTGGCAATGCGGCCGCGGGCGGCGCTGGAACTGCTGCGGCTGGTGGCCATCATGGCGGCACCAGCGCCAGCTCTGGCGGCGGCGAAGCCATTGACTTTAAGCATCTGTTCGAGGAGCTGTGTCCCGTGTGCGGGGACAAGGTGAGCGGCTATCACTACGGGCTTCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTTCAGAACAAAAAGGTATACACTTGCGTGGCGGAGCGCTCCTGTCACATCGATAAGACGCAACGCAAACGCTGTCCATATTGTCGGTTCCAGAAGTGCTTGGAGGTTGGCATGAAACTAGAGGCGGTTCGAGCGGACCGGATGCGTGGCGGTCGCAACAAGTTTGGGCCCATGTACAAACGAGATCGGGCGCGGAAGCTGCAGGTGATGCGTCAGCGTCAACTGGCGCTGCAGGCGTTGCGCAGTTCGATGGGCACGGACATAAAGCCAACGCCGCTCTCGCCGGGCTATCAGCAAGCATatccaaatatgaatattaagcAAGAAATTCAAATACCTCAGGTATCCTCACTCACACAATCGCCAGACTCATCGCCCAgccccattgccattgccttgGGTCAGGTGAACGCGAGCGGGGGCGGTGTGATAGCCACGCCTATGAATGCCGGCAATTTGGGTGGCGGTAACGGCAGTGGCAGCTCCTCACtgggcaatggcaacaacatcaccgccaacaataacaacagcagcaacagcacaggCAGCGGTGGCGGAGGAGGGGGTGGTGGAGGTGGTGGAGGTGGCACTAACgctggcggtggcggcggcagcaacaacatcgcCGACGCGCTGCAACGCAACggaaacagcagcaatagcaacagcaacagcagctcccACGAAATCGGCACTGGATCTCTACAGAACACAGCCGAATCGAAATTGTGCTTCGATTCCGGCACACATCCATCTAGCACAGTCGATGCGCTCATTGAGCCACTGAGGGTCTCACCAATGATACGCGAGTTTGTGCAATCGATCGATGATCGGGAATGGCAAACACAGCTGTTTGCGCTACTCCAGAAGCAGACGTACAATCAAGTTGAAGTGGATCTCTTTGAGTTAATGTGCAAAGTGCTTGATCAGAATCTATTCTCACAAGTAGATTGGGCAAGAAACACCGTCTTCTTTAAGGATTTAAAGGTGGACGATCAGATGAAGCTGCTTCAGCATTCATGGTCTGATATGCTCGTGCTGGATCATCTGCATCACCGCATACACAACGGACTGCCCGATGAGACACAGCTGAATAACGGCCAGGTATTCAATCTGATGAGCCTGGGCCTCTTGGGCGTGCCACAGCTGGGCGACTACTTCAACGAACTGCAAAATAAGCTGCAGGACCTGAAGTTCGACATGGGCGACTATGTGTGCATGAAATTCCTAATACTGTTAAATCCAGATGTGCGTGGAATTGTGAATAAGAAGACCGTCTTGGAGGGACATGAAAATGTCCAGGCCGCACTGCTGGACTACACGCTGACTTGCTATCCCTCAGTTAATGACAAATTCAGGAGGCTATTGAACATATTACCGGAAATTCACGCAATGGCCGCGCGGGGCGAGGAGCACCTATACTCGAAGCATTGTGCTGGCAGTGCGCCCACACAGACGCTTCTCATGGAGATGCTACATGCAAAGCGGAAAGTGTAA
Protein Sequence
MLLEMDQQQATVQFISSLNLSPFSMQLEQQQPASPAHSNTNNNNNNSSNSNNNNDNDTNALSSADNDYSAYTLQLGTHQQQQQQQQHHSTHHQQQQQQQQQQQQHYQQQQQNIANNNANAANQFNASSYSYIYNFDSQYIFPTGYQETNSSHSQQSANGAGNAAAGNSSQLLNGGGTSAGNGYMLLPPGASGTSAAAAAHMSGSVGGNAAAGGAGTAAAGGHHGGTSASSGGGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSMGTDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASGGGVIATPMNAGNLGGGNGSGSSSLGNGNNITANNNNSSNSTGSGGGGGGGGGGGGGTNAGGGGGSNNIADALQRNGNSSNSNSNSSSHEIGTGSLQNTAESKLCFDSGTHPSSTVDALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNKKTVLEGHENVQAALLDYTLTCYPSVNDKFRRLLNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV