Dbas010477.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila basisetae
Gene Symbol
ftz-f1
Assembly
GCA_035041595.1
Location
JAWNLB010000159.1:250773-265991[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.6e+04 -10.1 26.7 33 166 16 161 4 195 0.63
2 3 1.5e-19 1.2e-15 57.7 0.3 1 79 328 405 328 436 0.75
3 3 2.9e-72 2.3e-68 231.3 1.5 157 408 528 772 489 774 0.91

Sequence Information

Coding Sequence
ATGTTATTAGAAATGGATCAACAACAGGCGACTGTACAGTTTATATCGTCGCTGAATTTGTCGCCGTTTAGCATGCAActcgaacaacagcagcccgCAAGTCCGGCgcacagcaacaccaacaacgctaacagcaacaacaacaacaacagcagcaacaacaacaacaacagcagtaatagcaacaacaacaccaacaataacaacgataACGATACAAATGCATTGAGCAATTCCGATAACGATTACAGTGCATACACGCTGCAACTGGGcagtcatcagcagcagcagcaacactcacATCACACAcatcaccagcaacagcagcaacaacaacagcagcagcattaccaacagcaacaacaacagaatatTGCCAACAATGTGAATGCAGCGGCGAACCAATTCAATGCTTCCTCCTattcgtatatatacaatttcgATTCACAGTACATATTCCCGACAGGCTATCAGGAAACGAACTCATCCCATTCGCAGCAAAGTGCAAATGGAGCTGGCAAtgccgcagcagctggcaactcTGGCCAGCTCTTAaacggtggcagcagcagctcgacaGGTAATGGTTACATGCTGTTGCCACCAGGCGCTAGTGGAAcctcagctgctgccgctgcccatATGTCCGGCAATGTGGGCGGCAACCCGGCAGCGGGCGTAAGTGGAACTGCTGCCGGCGGTGGTCATCATGGCACCAGCGCCACCTCTGGCAGTGGTGAAGCGATCGATTTTAAGCATCTGTTCGAGGAGCTGTGCCCCGTTTGCGGGGACAAGGTGAGCGGCTATCACTACGGCCTGCTCACTTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACcgttcaaaacaaaaaggtcTACACTTGCGTAGCGGAGCGCTCCTGTCACATCGACAAGACGCAGCGTAAACGTTGTCCATATTGTCGATTCCAAAAGTGCCTGGAGGTGGGCATGAAACTAGAGGCGGTTCGAGCGGACCGGATGCGTGGCGGTCGCAATAAATTTGGACCCATGTACAAACGGGATCGGGCGCGAAAACTGCAAGTGATGCGTCAGCGGCAATTGGCGTTGCAGGCGTTGCGCAGTTCGATGGGCACGGACATAAAGCCGACGCCTCTCTCGCCGGGCTATCAGCAAGCATAtccaaatatgaatattaagcAAGAAATTCAAATACCTCAGGTATCCTCACTCACACAATCGCCAGATTCATCACCCAGCCCCATTGCAATTGCCTTGGGTCAGGTGAATGCGAGCGGGGGCGGTGTGATAGCCACGCCGATCAATGCCGGCAACGGCAATGGTGGCTCCTCGCTTGGCAATGGCAatagcaacaccaacaacaacaacaacggcagcaacggcACAGGCAGCGGAagcggaggaggagggggtGGTGGAGGAGGCACCAATAcaggtggcaacaacaacgtcacTGATGGCCTGCAACGCAAtggtaacagcagcaatagcaacagcaacagcagctgccacgaAATCGGCACTGGATCTCTACAGAACTCAGCCGAAGCGAAATTGTGCTTCGATTCTGGCACACATCCATCGAGCACAGCCGACGCGCTTATTGAGCCACTGAGggTCTCACCAATGATACGCGAGTTTGTGCAATCGATCGATGATCGGGAATGGCAAACGCAACTTTTTGCGCTACTGCAGAAGCAGACTTACAATCAAGTTGAAGTGGATCTCTTTGAGTTAATGTGCAAAGTGCTTGATCAGAATCTATTCTCACAAGTGGATTGGGCAAGAAACACCGTCTTCTTTAAGGATTTAAAGGTTGACGATCAGATGAAGCTGCTTCAGCATTCTTGGTCCGATATGCTCGTGTTGGATCATTTGCATCATCGCATTCATAACGGTCTGCCCGATGAGACTCAGCTGAATAACGGTCAGGTCTTCAATTTGATGAGTCTTGGTCTACTGGGTGTGCCACAGCTTGGTGACTATTTCAACGAACTGCAGAATAAGCTGCAGGAACTGAAGTTCGATATGGGCGACTATGTTTGCATGAAATTCCTAATACTGCTAAATCCAGATGTGCGAGGCATTGTGAACAAGAAGACCGTCTTGGAGGGTCATGAGAATGTTCAGGCCGCGCTGCTGGATTACACACTGACATGTTATCCCTCAGTTAATGACAAATTCAGGAGGCTACTGAACATCCTTCCAGAAATTCACGCAATGGCCGCACGGGGCGAGGAACACCTCTACTCAAAGCATTGTGCTGGCAGTGCGCCCACACAGACGCTGCTCATGGAGATGCTGCATGCAAAGCGGAAAGTGTAA
Protein Sequence
MLLEMDQQQATVQFISSLNLSPFSMQLEQQQPASPAHSNTNNANSNNNNNSSNNNNNSSNSNNNTNNNNDNDTNALSNSDNDYSAYTLQLGSHQQQQQHSHHTHHQQQQQQQQQQHYQQQQQQNIANNVNAAANQFNASSYSYIYNFDSQYIFPTGYQETNSSHSQQSANGAGNAAAAGNSGQLLNGGSSSSTGNGYMLLPPGASGTSAAAAAHMSGNVGGNPAAGVSGTAAGGGHHGTSATSGSGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSMGTDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASGGGVIATPINAGNGNGGSSLGNGNSNTNNNNNGSNGTGSGSGGGGGGGGGTNTGGNNNVTDGLQRNGNSSNSNSNSSCHEIGTGSLQNSAEAKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQELKFDMGDYVCMKFLILLNPDVRGIVNKKTVLEGHENVQAALLDYTLTCYPSVNDKFRRLLNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00485910;
90% Identity
iTF_00508363;
80% Identity
iTF_00485910;