Dbas013185.2
Basic Information
- Insect
- Drosophila basisetae
- Gene Symbol
- hang
- Assembly
- GCA_035041595.1
- Location
- JAWNLB010000174.1:11084949-11103273[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.36 22 5.6 1.0 3 23 510 531 509 531 0.93 2 18 0.46 28 5.3 3.2 3 22 638 657 636 657 0.89 3 18 0.00078 0.048 14.0 3.3 1 22 764 785 764 787 0.90 4 18 0.09 5.5 7.5 0.1 2 21 799 818 798 819 0.93 5 18 0.00091 0.056 13.8 0.2 2 23 963 985 962 985 0.95 6 18 0.0026 0.16 12.3 0.1 1 23 993 1016 993 1016 0.96 7 18 0.0002 0.012 15.9 0.2 2 23 1104 1125 1103 1125 0.97 8 18 0.00038 0.023 15.0 2.9 2 23 1223 1245 1222 1245 0.97 9 18 0.029 1.8 9.0 0.2 2 23 1254 1276 1253 1276 0.95 10 18 0.0018 0.11 12.9 0.3 1 23 1289 1312 1289 1312 0.97 11 18 0.00016 0.01 16.1 1.1 1 23 1370 1392 1370 1392 0.99 12 18 0.0025 0.16 12.4 0.9 1 23 1400 1423 1400 1423 0.96 13 18 0.089 5.4 7.5 0.4 2 19 1431 1448 1431 1449 0.94 14 18 0.0048 0.29 11.5 0.1 3 23 1556 1576 1555 1576 0.98 15 18 0.0014 0.084 13.2 0.1 1 23 1611 1633 1611 1633 0.97 16 18 0.00077 0.048 14.0 0.6 2 23 1723 1745 1722 1745 0.93 17 18 0.0084 0.51 10.7 0.3 3 23 1801 1821 1801 1821 0.98 18 18 8.8e-05 0.0054 17.0 2.1 1 23 2262 2284 2262 2284 0.99
Sequence Information
- Coding Sequence
- ATGTGCGAcgctgccacaacaacaacaacagcagcaacaacaacaacaactgcagcagcagtagcacaaggaacaggaacaggagctGCTGGCGATACAGCGATGGAAGGACAAAATCAACGAGAGCGACAAAGCTGCTGTCGCCTGTGCCTCGCGCCCGCCAGCGAATGCATTTCGATCTTTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACATCGGTGGATCGTCTGTCGTTGCATATTTGCCATGCCTGCATCAGTTATTTGAACTCATGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCACAGTCGAAGCAGCGCCAATGGCTGGAGACGGACAAAACCAAGCAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAGCACcattgagcaacaacaacagcagcagcagcagcacgattTAAAAATGGATTCAGCGACGGCTGCAGCTGAAAAGGCGTCCGCTGCCAACATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCGAGTcccaagcaacagcagcaagcacagcaacaacagtcgcagcaacaTTCTCAGCAACAGCATGCAACAGGGGCAAGATCAACAACGAAAACAtcagctgcggcggcggcggtggcagagTCGCAACAAACATTGCAAACCCTTTTATTGCAGGTgcccacagcagcagcagcagcagcgacattGGCAACGTCGTcaacacagccacagcaacagcagcgcaagtatcagcagcagcagcagcagcaacgtggcaagcagcagcaacatcagtatcatcaacagcagcagcggcagagtCGCGTTCGTCAACcgcgacgacagcaacaagcagcaacgaGCAAATTCAGGAGCAAGTTGTATGTGCCACTGGATATATCGGTGCCAGTACTGCCAGCACTGCCAgcactgttgctgccaccgccgccagctgttgctgatgcagcgtcgttgccattgccgctgtcgctgccacTTGATTTCAGCCAGAATCCGAATCCAAATCCCAATCCAAATCAAAATCTAAATCAGAGATATACAAGTAGCGTTTTGGTGCCGCAGCCGCAGGCGCCGCCGATGCCGCTGCCCCCGCCAGTTGCAACAATGAGCAGCAACGAGGCTGCCATTGGtggtgcaactgcaactgcaaccgcaGTCACGACTCCATTGCTCATGCCGCCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCCTGGACGATACGGATGATGACTTTCAAATGAAGTGCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAATACCTCCGACTATGATTATACGGCTCAGCATGGCGTGACCGCTGTTGTGGCGGCTGCATCGCTGCCAGCCAGCGCCGTTGCAAATGTGGCCGCCGCTGGCGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCTCGTCGCCACGAGCGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCAATCACCAAACCGACACCGGCCCTAGCCGCCGCCTTGGAGATACAGcgtgcggcggcggcggcagctgcaaccGCTGAGGCAACGCGTGCCGCTGCCGGTGGCAATATATCGGCGCAAAAATATCGACAGGTGGTGATGAACACGTTCATCAAATGCGAAAACGGTGGCTTCGACTACGACAATCCCGAACAGTAtcagcagctgttgtcgcACGACAAGGTCGACTTCATACAGGAGAACAGCGAGTTTCTTGAACAGTACCAGACGATGACGTGTCGCTGTTGCAACAAGTACTTCAGCACGTACAAAAACTTTATGGCGCACGTACGCAAAAAGTATCCGTTGCTGCCACGCAACCTCTGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTCAACGCACTGCGCACCAAACAGCCAAACTTTGTccatgccaatgccaatgccccATCCACTTCCACTGCGGCCGCAACGACTGCtgcacaccagcagcaacagttggtgACAGCTCAtgaaacatcagcaacaacaacagcaacagcatcaacggATCGTCCGGAGAAATTGCGTGCCAAGGAGTTGCTGGTTAACAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTTCGCACAAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCAGATGTCCAGCGCAAGGATAACAACTCGATACAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCCGTTGATCGTCGAAGACACTACAATAACATGGATTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCGAAACTGGAGACGCATCAGCGATTCCTCGACCATGTCTATCAGGATCATTTGGGTGGGGTGAGCAGTGATAATGCATCGTCCACGGCGACGACCAGCGGCTTGGATCATTCGCCCGGCAAGCGCAGTTTGCTGGGCGCCCTTGGCATCGGCGTTGTCAGTCAATCACCCAATGATGAGtcgcgcagcagcaacagcaacaaccacagcaataacaataataacaacagtaacaacaacaataatacacCTATAACTTCGACACCTAAAGTACCAAccggagcagcaacagctggtggaggaggaggagcagcagcaaccagtgGCGGATCGACAACATCGGGTAGTCGAGATGCACCCAAATCACAGTATTTCTCACGAATGCCACAGGTCTGTCCGATCTGTGGCCAGCagtacaacaactacaacaatgtGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCAGAGACATATAAGTGTGTCCGCTGTGGATTGGGCTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTTGACAAGAATCGGCATTCGGGCGGCTTTGAATATATTGTGAATGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTAATGTCAATAACAAATGGTGGGACACTCgatgatgatgacgatgaaggCGGCAACATTGCCAAAAAGATGAGACTCGAtgatagcagcaacaacagcagcagcatcaacatgAGCAGCATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACAGCATCGATAACGACAAGTGCTGCTCTGGCGGTTGCCAATCGCATGACGCCCAAATCGCtgacaataacagcaacgcCACCGCTCGAGacaacgacggcaacaacaattgcagctggagttgcagcagtggcaacaacatcatcaggAGCAGTCgcctcaacagcaacaggatcAGGCTCATCATCCGGCAACTTGCCGCCAGCAATGGTGCATCAGACGGCACAGGAGCAGGCGGTATTCCGTCGCAGCCTGGATCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGCATCTGTCAGCGCAGATTCAGTTCGAAGAAATCGTATCGCTACCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCGGAGTTTGCCTACGAGAAGGGGCTCAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACGGTGTACAGTTCCGAGCTGGaattgcagcagcacaagcgCAGCGTACACAAGTCACACGCCAGTgattcatcatcatctgcagctggtggtgctggtgctgctggcaaATCATCATTGAAATCTGCTACTGCAACTACCTCATCGACAGCTGAGCTGGTCGCAGACACATCATCCGCCTCGGGCACGGCGGGTGCGGCCATTTTGCTGCCACTTTACTGGTACCAGTGCAAATATTGTCCATCCAATTTCAACACCAACAAGAAACTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGCCTCTGGGTGCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGCGCCCATCAGcaggatcagcagcagcagcaacaacaacagcagcagcaacaacagctgcagctgcaacatcatCAGCGACTCATCTTCAAGCACAAAAcgggcgatgatgatgacgaggaggaggacgatgaTCAGTTGCTACTAATGGACGatggcggtggcggcagcaATGATAGCAATGCTGGCAATGCCattgcatcagcagcagcagccgcagcggcagcagcagcagcagtcacaatAAATACGAGCACAATGAAGATACGCCTTCCGGAGGTTGCATGCACCATTTGCGGTGCCCGTTTCACCGATCAGGAAATATTCGCCAAGCACATACAGAAACACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCGATGTTCGATGATGGGCCAGCGGATGCCGGACAATTTCAGGTTGAGCACCAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCACCAAGACGTTCCCGCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCAATCAACGACGGCGAAGCGACAACGctgaacaacagcagcaacaacagcagcagcagcaacaacaacaacaacaacaattcgctGAGCTCACCATCGATGCTGCATCTACGCGAACTGCATGCGGTGGGCCTGATGcccaaccagcagcaacaccagaaacaacaacagcaacaacaacagcagcagcaacagcagcagcaacaacggacGAGCAAATCAATGAAACGGAAACGTGAACTGAAATGCGAATACTGCGCCTCCACAttcattagcaacaacaacctgcGACGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAACCTGCCAGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTGGCGTGTCGCCGTTGCGGCGATCTACAATTTGATACCAAAGAGCAGTGGATCGAGCATAAGCTGGCCGATGCGAGAGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGATGTGATTGTGCCGGTCGCCACCAAGCCACCAGCACCGGCAACACCAGTAGCCAAtaaaactgcagcagcagcagcagcaacaacaacaacaacagcggcaacaacaacaacaattgcctacgcagcaacagttgcagctgctaaatcagcagcagcagcagcaacggcggcgacgaagacaacgacaacagcagcaaaagaactGAAGgttaaacaacagcagcaggaggataATGACCTGCAGCTGGATGATGAGAAGCTaacgaagcagcagcaacaggaggaggaggaggaggatgataGTGATATGGATGATGATACCGATAGTGGcaatgatgatgaggaggGCAGCACCAGtgctgacgatgatgatgatgacgatgatgatgaggagggCGATgtcgatgacgacgatgatgatgatgacgaagaTGAAGACAACGACAATGGTGAAAATGTAGttgcacagcagcaaatactgcaacaacagcctcaaaatacaaacaccaataacaacaacaacagcagcagcagcgctatTGAAAATGACGATGATCTCATTGAGGAGGTGATCGAGGATGATGGCATTGTCGAGCAGCTGGacgtcgatgatgatgaggaagaagatgatgacgatgacgacgatgatgatgatgatggcgaagacgacgacgacatcgatgaggatgaggacgaggaTGATCAGGCGAGACGCCTCAATTTCGACTACTCGCGCACCGACAGCGCCAAGCTAAATGGCAACGGTGGCAAACAGTCTGTGGCTAAATCAAAGACACAGccacagttgcagcaacagttgcagacACAGCCAATGCTGGTCATGCACAGTAGTAGTAGTCGCCACGTGAATGATGGCGAGGAGGAGGTGGATGATAtggatgatgatgttgatgacgatgatgttgTGGGTGAAGCGATGACCATTGATGATATTATTGAAGAGGATGATGGTGTGGATGATGACGATGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgatgatgacgacgaagatgatgatgacgacgatgaggatgatgatgttgaGGAGGACatggacgatgatgatgatggggatGACGACGATGCCGATGTCAACAACACCAATATTGGCAACGGTGTTGGCCGTGTGGGTCGAGAAGATGCTGATGGTGATGgggatggtgatggtgatggtgatgttAATGGTGGTACATCATCATCTGAGAGCgagtcgacaacaacaacatcgcaTTCAACTGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTGCAGACACATATTAAAAGTCATTTCCTCAATGGGCCATCGGcggggagcagcagcaacagcaacaagggcAACGGCGCCAGCAGgagcaccaacaataacaacagcaacagcagtaacaaaatCAATACCAAAAAGTCCGGCTTGGATGCAacgaagacaacaacaacaacagcaacaacagcaacagcaacaacagttaagGCTGCTGCAGTAGCGGACGCTGCAACGGGCTTCAACTGA
- Protein Sequence
- MCDAATTTTTAATTTTTAAAVAQGTGTGAAGDTAMEGQNQRERQSCCRLCLAPASECISIFNSYAADKEPLATKIHNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLETDKTKQQTLLGYLDLNRAENGSTIEQQQQQQQQHDLKMDSATAAAEKASAANILDGIPQLKKRKSLTVYVSPSPKQQQQAQQQQSQQHSQQQHATGARSTTKTSAAAAAVAESQQTLQTLLLQVPTAAAAAATLATSSTQPQQQQRKYQQQQQQQRGKQQQHQYHQQQQRQSRVRQPRRQQQAATSKFRSKLYVPLDISVPVLPALPALLLPPPPAVADAASLPLPLSLPLDFSQNPNPNPNPNQNLNQRYTSSVLVPQPQAPPMPLPPPVATMSSNEAAIGGATATATAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAVVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATRAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLSHDKVDFIQENSEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVHANANAPSTSTAAATTAAHQQQQLVTAHETSATTTATASTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASSTATTSGLDHSPGKRSLLGALGIGVVSQSPNDESRSSNSNNHSNNNNNNSNNNNNTPITSTPKVPTGAATAGGGGGAAATSGGSTTSGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDDEGGNIAKKMRLDDSSNNSSSINMSSIANQQKECLICNAVFSNNIGLSNHMRSHYTASITTSAALAVANRMTPKSLTITATPPLETTTATTIAAGVAAVATTSSGAVASTATGSGSSSGNLPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSHASDSSSSAAGGAGAAGKSSLKSATATTSSTAELVADTSSASGTAGAAILLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQQQQQQQLQLQHHQRLIFKHKTGDDDDEEEDDDQLLLMDDGGGGSNDSNAGNAIASAAAAAAAAAAAVTINTSTMKIRLPEVACTICGARFTDQEIFAKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVEHQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQIPINDGEATTLNNSSNNSSSSNNNNNNNSLSSPSMLHLRELHAVGLMPNQQQHQKQQQQQQQQQQQQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLACRRCGDLQFDTKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATKPPAPATPVANKTAAAAAATTTTTAATTTTIAYAATVAAAKSAAAAATAATKTTTTAAKELKVKQQQQEDNDLQLDDEKLTKQQQQEEEEEDDSDMDDDTDSGNDDEEGSTSADDDDDDDDDEEGDVDDDDDDDDEDEDNDNGENVVAQQQILQQQPQNTNTNNNNNSSSSAIENDDDLIEEVIEDDGIVEQLDVDDDEEEDDDDDDDDDDDGEDDDDIDEDEDEDDQARRLNFDYSRTDSAKLNGNGGKQSVAKSKTQPQLQQQLQTQPMLVMHSSSSRHVNDGEEEVDDMDDDVDDDDVVGEAMTIDDIIEEDDGVDDDDVVGVGGGVVEDDDDDDDEDDDDDDEDDDVEEDMDDDDDGDDDDADVNNTNIGNGVGRVGREDADGDGDGDGDGDVNGGTSSSESESTTTTSHSTAAHGAAADQSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPSAGSSSNSNKGNGASRSTNNNNSNSSNKINTKKSGLDATKTTTTTATTATATTVKAAAVADAATGFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00596083;
- 90% Identity
- iTF_00564801; iTF_00583110; iTF_00513607; iTF_00576489; iTF_00570538; iTF_00499727; iTF_00577201; iTF_00596083; iTF_00616340; iTF_00518584; iTF_00501949;
- 80% Identity
- -