Basic Information

Gene Symbol
hang
Assembly
GCA_035043845.1
Location
JAWNMR010000492.1:5026865-5042969[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.38 23 5.6 1.0 3 23 521 542 520 542 0.93
2 18 1.1 67 4.1 3.2 3 22 649 668 647 668 0.89
3 18 0.00081 0.05 14.0 3.3 1 22 774 795 774 797 0.90
4 18 0.094 5.8 7.5 0.1 2 21 809 828 808 829 0.93
5 18 0.00094 0.058 13.8 0.2 2 23 977 999 976 999 0.95
6 18 0.0027 0.17 12.3 0.1 1 23 1007 1030 1007 1030 0.96
7 18 0.00021 0.013 15.8 0.2 2 23 1117 1138 1116 1138 0.97
8 18 0.00039 0.024 15.0 2.9 2 23 1239 1261 1238 1261 0.97
9 18 0.031 1.9 9.0 0.2 2 23 1270 1292 1269 1292 0.95
10 18 0.0018 0.11 12.9 0.3 1 23 1305 1328 1305 1328 0.97
11 18 0.00017 0.01 16.1 1.1 1 23 1392 1414 1392 1414 0.99
12 18 0.0026 0.16 12.4 0.9 1 23 1422 1445 1422 1445 0.96
13 18 0.092 5.7 7.5 0.4 2 19 1453 1470 1453 1471 0.94
14 18 0.0021 0.13 12.7 0.3 3 23 1576 1596 1575 1596 0.98
15 18 0.0014 0.088 13.2 0.1 1 23 1631 1653 1631 1653 0.97
16 18 0.0008 0.05 14.0 0.6 2 23 1746 1768 1745 1768 0.93
17 18 0.0087 0.54 10.7 0.3 3 23 1824 1844 1824 1844 0.98
18 18 9.2e-05 0.0057 16.9 2.1 1 23 2297 2319 2297 2319 0.99

Sequence Information

Coding Sequence
ATGTGCGAcgctgccacaacaacaacaacagcagcagcagcggcaacgacaacaacatctgcagcagcagtagcacaAGGAACAGGAGCTGCTGGCGATACAGCGATGGAAGAACAAAATCAACGAGAGCGACAAAGCTGCTGTCGCCTTTGCATTGCACCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACATCGGTGGATCGTCTGTCGTTGCATATTTGCCATGCCTGCATCAGTTATTTGAACTCGTGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCACAGTCGAAGCAGCGCCAGTGGCTGGAGACGGACAAAACCAAGCAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAATACCattgagcaacagcaacaacagcaccagcagcagcacgaatTGAAAATGGATTCAGCGACGGCTGCAGCTGAAAAGGCGTCCGCTGCCAACATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCGAGTcccaagcaacagcagcaagcacagcaacaacagtcgcagcaacaTTCTCAGCAACAGCATGCAACAGGGGCAAGACCAACAACGAAAACATCAgcggcgacggcggcggcggtggcagaGTCGCAACAAACATTGCAAACCCTTTTATTGCAGGTGCccacagtagcagcagcagcagcagcgacattGGCAACGTCGtcaacacagcaacagcagcgcaagtatcaacagcagcagcagcaacgtggcaagcagcagcaacatcagtatcatcaacagcagcagcgacagagTCGCGTTCGTCAACCgcgacgacagcaacaagcaaatgcAACGAGCAAATTCAGGAGCAAGTTGTATGTGCCATTGGATATATCGGTGCCAGTGCTGCCAGCACTGCCAGCGCTgttgccgccaccgccgccagctgttgctgatgcagcgtcgttgccattgccgctgtcgctgccacTTGATTTCAGCctgaatccgaatccgaatccaaATCCCaatccaaatcaaaatctAAATCAAAGATATTCAAGTAGCGTTTTAGTGCCGCAGCCTCAGCCGCCACCGTTGCCGCTGCGCCCGCCAGTTGCAACAATGAGCAGCAACGAGGCTGCCATTGCCGCTGCCACTGGCTGtggtgcaactgcaactgcaactgcaaccgcaGTCACGACTCCATTGCTCATGCCGCCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCCTGGATGATACGGATGATGACTTTCAAATGAAGTGCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAATACCTCCGACTATGATTATACGGCTCAGCATGGCGTGACCGCTGTTGTGGCGGCTGCATCGCTGCCGGCCAGTGCCGTTGCCAATGTGGCCGCCGCTGGCGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGTCGACACGAGCGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCAATCACCAAACCGACGCCGGCCCTCGCCGCCGCCCTGGAGATACAGCgtgcagcggcggcggcagcggcaaccgCTGAGGCAACGCGCGCCGCTGCCGGTGGCAATATATCGGCGCAGAAGTATCGACAGGTGGTGATGAACACGTTCATCAAATGCGAAAACGGTGGCTTCGACTACGACAATCCCGAGCAGTATCAGCAGCTGTTGTCGCACGACAAGGTCGATTTCATACAGGAGAACAGCGAGTTTCTCGAACAGTACCAGACGATGACGTGTCGCTGCTGCAACAAATACTTCAACACGTATAAAAACTTTATGGCGCACGTACGCAAAAAGTATCCGTTGCTGCCGCGCAATCTGTGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTCAACGCACTGCGCACCAAACAGCCAAACTTTGTccatgccaatgccaatgcctcATCCACTTCCACTCCAACCACAACGACtgctttgcagcagcaacagttggtgACAGCAAATgaaacatcagcaacaacaacagcaacaacatcaacggaTCGTCCGGAGAAGTTGCGTGCCAAGGAGCTGCTGGTTAACAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTTCGTACAAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTCCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCCGTAGATCGTCGAAGACACTACAATAACATGGATTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCGAAACTGGAGACGCATCAGCGATTCCTCGACCATGTCTATCAGGATCATTTGGGTGGGGTGAGCAGTGATAATGCATCGTCCACGGCGACGGCCAGTGGCTTGGATCATTCACCCGGCAAGCGCAGTTTGCTGGGCGCCCTTGGCATTGGCGTTGTCAGTCAATCGTCCAATGATGAGtcgcgcagcagcaacagcaacaaccacaacaacaacaacaataataacaacagcaacaacaacaataatacacCTCTAACCTCGACACCTAAAGTACCAaccggagcaggagcagcaacagctggtggtggaggcggaggagcagcagcaaccagtgGCGGATCGACAACATCGGGCAGTCGAGATGCACCCAAATCACAGTATTTCTCACGGATGCCACAGGTCTGTCCGATCTGTGGCCAGCAgtacaacaactataacaatgTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCCGAGACATATAAGTGTGTCCGTTGCGGATTGGGCTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTTGACAAGAATCGGCATTCGGGCGGCTTTGAATATATTGTGAATGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTGATGTCTATAACAAATGacgacgatgacgatgaagcCGGCAACGGCGGCAACATTGCCAAAAAGATGAGACTCGAtgatagcagcaacaacagcagcagcatcaacatgAGCAGCATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACAGCATCGATAACGACAAGTGCTGCTCTGGCGGCTGCCAATCGCATGACGCCCAAATCGCTGACAATAACAGCAACGCCACCGCTGGAGacaacgacagcaacaacaacagcagctggagttgctgcagtagcagcatcatcgtcatcaggAGCAGTCgcctcaacagcaacagcatcaggaTCAGGTTCATCATCCGGCAACTTGCCGCCAGCAATGGCGCATCAGACGGCACAGGAGCAGGCGGTGTTCCGTCGCAGTCTGGATCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGCATCTGTCAGCGCAGATTCAGTTCAAAGAAATCGTACCGCTACCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTATGCAATGCGGAGTTCGCCTACGAGAAGGGGCTCAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCAACGGTCTACAGTTCCGAGCTCGAATTGCAGCAACACAAGCGCAGCGTACACAAGTCTCAAGCCAGCgattcatcatcatcagcagctggtggtgctggtgttggtgctgctgctgctgctggcaaatcATCATTGAAATCTGCTACTGTTACTGCTACCTCATCGACAGCTGAGCTGGTCGCAGACACATCATCCCCGTCGGGCACGGCGGGTGCGGCAATTCTGCTGCCACTCTACTGGTACCAGTGCAAATATTGTCCATCCAATttcaacaccaacaagaaaCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGTGGCAATGTCTACAGTGGCCGCAAGAGCCTCTGGGTGCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGCGCCCATCAGCAggatcagcaacagcagcagcagcagcaacaacaacagcagcagcagcaacagcaacaacagctgcagctgcaacatcaTCAGCGACTCATCTTCAAGCACAAAAcgggcgatgatgatgacgaggaggaggacgatgaTCAGTTGCTGCTAATGGACGATGGCGGTGGCGGCAGCAATGACAGCAATGCTGGCAATGCCagtgcatcagcagcagcagtcacaatCAATACAAGCACAATGAAGATACGCATTCCGGAAGTTGCATGCACCATTTGCGGTGCCCGTTTCACCGATCAGGAAATATTCACCAAGCACATACAGAAACACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCGATGTTCGATGATGGGCCAGCGGATGCCGGGCAATTTCAGGTTGAGCACCAGAACGAGAATGGGGAATACGCGTGCGACTTGTGCACCAAGACGTTCCCGCAGGTGATCGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCAATCAACGACGGCGAAGCGACAACGctgaacaacagcagcaacaacagcagcagcagcaacaacaacaacaacaacaacaattcgctGAGCTCATCATCGATGCTGCATCTACGCGAACTGCATGCGGTGGGTCTGATGcccaatcagcagcaacaccagaaacaacaacagcaacaacaacagcagctgcaacagcaacagcagcagcaacaacggacGAGCAAATCAATGAAACGGAAACGTGAACTGAAATGCGAATATTGCGCCTCCACATtcattagcaacaacaacctgcGACGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAACCTGCCAGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTAGCGTGTCGCCGATGCGGCGATCTACAATTTGATACCAAAGAGCAGTGGATCGAGCATAAGCTGGCCGATGCGAGAGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGATGTGATTGTGCCGGTCGCCACCAAGTCGCCAGCACCGGCAGCAGCCCATAAaactgcagcggcagcagcaacagcagcaaaaacaccagcaacaacagcggcaacaacaacaacaattgccgccgcagcaacaattgcagctgctacatcagcagcagcagcaacggcggcGACAAAgtcaacggcaacagcagcaaaagaactGAAggctaaacaacaacagcagcaggcggaTGAGGACCTGCAGCTGGATGATGAGAACCGaacgaagcagcagcaacaggaggaggaggaggatgataGTGATATGGATGATGATAGCGTTAGTggcaatgatgatgaggaggGCAGCACCAGtgctgacgatgacgatgatgacgatgatgatgatgatgatgaggaggagggCGACgtcgatgacgacgatgatgatgatgacgaagaAGAGAATGACAATGACGAAAATGTTATTGCACCGCAGCAAAtactgcaacaacagcctcaaaatacaaacaccaacaacaacaacaacagcagcagcatcgctATTGAAAATGACGATGATCTCATTGAGGAGGTGATCGAGGATGATGGCATTGTCGAGCAGTTGGAcgtcgatgatgatgaggaagacgatgatgatgatgacgacgatgatgatgatgatgacgatgatggcgaagacgatgacgatatcgatgaggatgaggacgaGGATGATGAGCAACATCAGCCGAGGCGCCTCCATTTCGACTACTCGCGCACCGACAGCGCCAAGCTGAATGGCAACGGTGGCAAACAGTCTGTGGCAAAATCAAAGACACAgccacagttgcagcaacagttgcagacACAGCCAATGCTGGCCATGCACAGCAGTAGTAGTCGCCACGTGGATGATGGCGAGGAGGAGGTGGATGATATGgatgatgttgatgacgatgatgttgTGGGTGAAGCGATGACCATTGATGATATTATTGAAGAGGATGATGGTGTGGATGATGACGATGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgatgatgacgacgaagatgatgatgaagacgatgatgacgatgatgttgaGGAGGACatggatgatgatgaagatgggGACGACGACGATGCCGATGTCAACAACACCAATATTGGCATCGGTGTTGGCCGTGTGGGACGAGAagatgctgatggtgatggtgatggtgatggtgatggtgatggggatggtgatggtgatggtggtacatcatcatcagagagcgagtcgacaacaacaacatcgcaTTCAACTGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTGCAGACACATATTAAAAGTCATTTCCTCCATGGGCCATCGGcggggagcagcagcaacagcaacagcaacaagagcaacggCGCCAGCAGGagcaccaataacaacagcagcaacaacaacagtagcaacagcaatagcagtaACAAAATCAATACCAAAAATACCGGCTTGGATGCAacgaagacaacaacaacaacaacaacaacagttaagGCTGCTGCAGTAGCTGACGCTGTCACGGGCTTCAACTGA
Protein Sequence
MCDAATTTTTAAAAATTTTSAAAVAQGTGAAGDTAMEEQNQRERQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLETDKTKQQTLLGYLDLNRAENGNTIEQQQQQHQQQHELKMDSATAAAEKASAANILDGIPQLKKRKSLTVYVSPSPKQQQQAQQQQSQQHSQQQHATGARPTTKTSAATAAAVAESQQTLQTLLLQVPTVAAAAAATLATSSTQQQQRKYQQQQQQRGKQQQHQYHQQQQRQSRVRQPRRQQQANATSKFRSKLYVPLDISVPVLPALPALLPPPPPAVADAASLPLPLSLPLDFSLNPNPNPNPNPNQNLNQRYSSSVLVPQPQPPPLPLRPPVATMSSNEAAIAAATGCGATATATATAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAVVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATRAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLSHDKVDFIQENSEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVHANANASSTSTPTTTTALQQQQLVTANETSATTTATTSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASSTATASGLDHSPGKRSLLGALGIGVVSQSSNDESRSSNSNNHNNNNNNNNSNNNNNTPLTSTPKVPTGAGAATAGGGGGGAAATSGGSTTSGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNDDDDDEAGNGGNIAKKMRLDDSSNNSSSINMSSIANQQKECLICNAVFSNNIGLSNHMRSHYTASITTSAALAAANRMTPKSLTITATPPLETTTATTTAAGVAAVAASSSSGAVASTATASGSGSSSGNLPPAMAHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSQASDSSSSAAGGAGVGAAAAAGKSSLKSATVTATSSTAELVADTSSPSGTAGAAILLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQQQQQQQQQQQQQLQLQHHQRLIFKHKTGDDDDEEEDDDQLLLMDDGGGGSNDSNAGNASASAAAVTINTSTMKIRIPEVACTICGARFTDQEIFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVEHQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQIPINDGEATTLNNSSNNSSSSNNNNNNNNSLSSSSMLHLRELHAVGLMPNQQQHQKQQQQQQQQLQQQQQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLACRRCGDLQFDTKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATKSPAPAAAHKTAAAAATAAKTPATTAATTTTIAAAATIAAATSAAAATAATKSTATAAKELKAKQQQQQADEDLQLDDENRTKQQQQEEEEDDSDMDDDSVSGNDDEEGSTSADDDDDDDDDDDDEEEGDVDDDDDDDDEEENDNDENVIAPQQILQQQPQNTNTNNNNNSSSIAIENDDDLIEEVIEDDGIVEQLDVDDDEEDDDDDDDDDDDDDDDGEDDDDIDEDEDEDDEQHQPRRLHFDYSRTDSAKLNGNGGKQSVAKSKTQPQLQQQLQTQPMLAMHSSSSRHVDDGEEEVDDMDDVDDDDVVGEAMTIDDIIEEDDGVDDDDVVGVGGGVVEDDDDDDDEDDDEDDDDDDVEEDMDDDEDGDDDDADVNNTNIGIGVGRVGREDADGDGDGDGDGDGDGDGDGGTSSSESESTTTTSHSTAAHGAAADQSNSSYTCDLCQLCFDSQELLQTHIKSHFLHGPSAGSSSNSNSNKSNGASRSTNNNSSNNNSSNSNSSNKINTKNTGLDATKTTTTTTTTVKAAAVADAVTGFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00596083;
90% Identity
iTF_00486003;
80% Identity
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