Doch003696.1
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- hang
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000021.1:14790789-14807260[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.38 24 5.6 1.0 3 23 501 522 500 522 0.93 2 18 0.48 30 5.2 3.2 3 22 629 648 627 648 0.89 3 18 0.00081 0.051 14.0 3.3 1 22 759 780 759 782 0.90 4 18 0.094 5.9 7.5 0.1 2 21 794 813 793 814 0.93 5 18 0.00094 0.059 13.8 0.2 2 23 956 978 955 978 0.95 6 18 0.0027 0.17 12.3 0.1 1 23 986 1009 986 1009 0.96 7 18 0.00021 0.013 15.8 0.2 2 23 1097 1118 1096 1118 0.97 8 18 0.00039 0.024 15.0 2.9 2 23 1247 1269 1246 1269 0.97 9 18 0.03 1.9 9.0 0.2 2 23 1278 1300 1277 1300 0.95 10 18 0.0018 0.12 12.8 0.3 1 23 1313 1336 1313 1336 0.97 11 18 0.00017 0.011 16.1 1.1 1 23 1394 1416 1394 1416 0.99 12 18 0.0026 0.17 12.3 0.9 1 23 1424 1447 1424 1447 0.96 13 18 0.052 3.3 8.3 0.6 2 19 1455 1472 1455 1473 0.95 14 18 0.0021 0.13 12.7 0.3 3 23 1581 1601 1580 1601 0.98 15 18 0.0014 0.09 13.2 0.1 1 23 1636 1658 1636 1658 0.97 16 18 0.0008 0.05 14.0 0.6 2 23 1748 1770 1747 1770 0.93 17 18 0.0087 0.55 10.7 0.3 3 23 1826 1846 1826 1846 0.98 18 18 0.0052 0.33 11.4 1.8 1 23 2317 2339 2317 2339 0.99
Sequence Information
- Coding Sequence
- ATGTGCGAcgctgccacaacaacaacaacagcagcagcaacaacaactgcagcagcagtagcacaAGGAACAGGAGTTGTTGGCGATACAGCGATGGAAGAACAAAATCAACGAGAGCGGCAAAGCTGCTGTCGCCTATGCCTTGCGCCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAACCGCTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACATCGGTGGATCGTCTGTCGTTGCATATTTGCCATGCCTGCATCAGTTATTTGAACTCATGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCACAGTCGAAGCAGCGCCATTGGCTGGAGACGGACAAAACCAAGCAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAGCACCattgagcaacagcaacaacagcagcagcagcacgatTTAAAAATGGATTCAGCGACGTCTGCAGCTGAAAAGGCGTCCGCTGCCAATATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCGAGTcccaagcaacagcagcaagcacagcaacaacaatcgcagcAACATTCTCAGCAACAGCATGCAACAGGGGCAAGATCAACAACGAAAACATCAGCTGCGGCGTCGGCGGTGGCAGAGTCGCAACAAACATTGCAAACCCTTTTATTGCAGGTgcccacagcagcagcgacattGGCAACGTCgtcaacacagcaacagcaacagcagcgcaagtatcaacagcagctgcagcagcaacgtggcaagcagcagcaacatcagcatcatcaacagcagcagcggcagagTCGCGTTCGTCAGCcgcgacgacagcaacaagcgGCAACGAGCAAATTCAGGAGCAAGTTGTATATGCCATTGGATATATCGGTGCCAGCACTGCCAGCGCTGTTGCCGCCACCgccaacagctgttgctgatgcagcgtcgttgccattgccgctgtcgctgccacTTGATTTCAGCCAGAATCCGAATCCAAATCCCAATCCAAATCAAAATCTAAATCAGAGATATACAAGTAGCGTTTTAGTGCCGCAGCCGCAGGCGCCGCCGATGCCGCTGCCCCCGCCAGTTGCAACAATGAGCAGCAACGAGGCTGCCATTGGTGgtgcaactacaactgcaaccgCAGTCACGACTCCATTGCTCATGCCGCCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCCAAGACGATACGGATGATGACTTTCAAATGAAGTGCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAATACCTCCGACTATGATTATACGGCTCAGCATGGCGTGACCGCTGTTGTGGCGGCCGCATCGCTGCCGGCCAGCGCCGTTGCAAATGTGGCCGCCGCTGGCGACTCAAAGGTGGCCAGCTGCCGGGCGTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGTCGCCACGAGCGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCAATCACCAAACCGACACCGGCCCTCGCCGCCGCCTTGGAAATACAGCgtgcagcggcggcggcagcggcaaccGCTGAAGCAACGCGTGCCGCTGCCGGTGGCAATATATCGGCGCAAAAGTATCGACAGGTGGTGATGAACACGTTCAGCAAATGCGAAAACGGTGGCTTCGACTACGACAATCCCGAACAGTATCAGCAGCTGTTGTCGCAAGACAAGATCGACTTCATACAAGAGAACAGCGAGTTTCTCGAACAGTACCAGACGATGACGTGTCGCTGTTGCAACAAGTACTTCAGCACGTATAAGAACTTTATGGCGCACGTACGCAAAAAGTATCCGTTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCAAAGGCGCTGTTCATATCGCACCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTCAACGCACTGCGCACCAAACAGCCAAACTTTGTctatgccaatgccaatgccaatgccccATCCACTTCCACTGCAGCCATAACGACTGCtgtacagcagcagcagcagcaacagttgatgACAGCAAacgaaacagcagcaacaacaacagcaacaacatcaacggaTCGTCCGGAGAAGTTGCGTGCCAAGGAGCTGCTGGTTAACAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTTCGCACAAAGCACGAATTCCGCACCCATGTCTACGACAAGCATGCAGATGTTCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCCGTTGATCGTCGAAGGCACTACAATAACATGGATTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCGAAACTGGAGACGCATCAGCGTTTCCTCGACCATGTCTATCAGGATCATTTGGGTGGGGTGAGCAGTGATAATTCATCGTCCACGGCGACGACCAGCGGCTTGGATCATTCGTCCGGCAAGCGCAGTTTGCTGGGCGCCCTTGGCATCGGCATTGTCAGTCAATCATCCAATGATGAGttgcgcagcagcaacaacaacaaccacaacaacaacaataataacaacagtaacaacaacaacaacaataatacacCTTTAACTTCGACACCTAAACTACCAATCGtcacaggagcagcaacagctggtggaggaggaggagcagcagcaaccagtgGCAGTCGAGATGCACCCAAATCACAGTATTTCTCACGAATGCCACAGGTCTGTCCGATCTGTGGCCAGCAgtacaacaactataacaatgTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCAGAGACATATAAGTGTGTCCGCTGCGGATTGGGCTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTTGACAAGAATCGGCATTCGGGCGGCTTTGAATATATTGTGAATGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTcgatgatgatgacgatgaaggCTGCAACATTGCCAAAAAGATGAGACTCGAtgatagcagcaacaacagcagcagcatcaacatcagcagcattGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACAGCATCTATAACGACAAGTGCTGCTCTGGCGGTTGCCAATCGCATGACGCCCAAATCGCtgacaataacagcaacgcCACCGCTGGAGGTCACATCGACGGCGGCGACGGCATCGGCAACATCATCATTGGCGACGTGCACGACAAATACATcgactgctgcagctgcaacaaagacaacgacgtcaacaacaactgcagctggacttgcagcagtggcagcatcatcatcaggaGCAGTTgcctcaacagcaacagcatcaggaTCAGGCTCATCATCTGGCAACTTGCCGCCAGCAATGGTGCATCAGACGGCACAGGAGCAGGCGGTATTCCGTCGCAGCCTGGATCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGCATTTGTCAGCGCAGATTCAGTTCGAAGAAATCGTATCGCTACCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCGGAGTTTGCCTACGAGAAGGGTCTCAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATTAAAGACGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACGGTCTACAGTTCCGAGCTGGaattgcagcagcacaagcgCAGCGTACACAAGTCACACGTCAGTGATTCGTCATCAACTGCAGccggtggtgctggtgctgctggcaaATCATCATTGAAATCTGCTACTGCAACTACCTCATCGACAGCTGAGCTAGTCGCAGACACATCATCCTCCTCGGGCACGGGGGGTGCGGCCAATTTGCTGCCACTTTACTGGTACCAGTGCAAATATTGTCCATCCAATTTCAACACCAACAAGAAACTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGTCTCTGGGTGCATCGCTACAAGAAGCATCCGCCGGTGCCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAAACATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGCGCCCATCAGcaggatcagcagcagcagctgcagcaacaacaacagcagcagcaacaactgctgcagctgcagctgcaacataaTCAGCGACTCATCTTTAAGCACAAAACGggagatgatgatgacgaggaggaggacgatGATCAGTTGCTGCTAATGGACGAtggcggtggcggcagcaATGATAGCAATGCTGGCaatgcatcagcagcagcggcagcagcagccgcagcagcagtcacaatAAATCCGAGCACAATGAAGATACGCATTCCGGAAGTTGCATGCACCATTTGCGGTGCCCGTTTCACGGATCAGGAAATATTCACCAAGCACATACAGAAGCACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCGATGTTCGATGATGGGCCAGCGGATGCCGGACAATTTCAGGTTGAGCACCAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCACCAAGACGTTCCCGCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCAACCAACGACGGCGAAGCGACAACgctgaacaacagcagcaacaacagcagcagcaacaacaacaacaacaatttggtgAGCTCATCATCGATGCTGCATCTACGCGAACTGCATGCGGTGGGCCTGATGcccaatcagcagcaacaccagaagcaacaacagcagcagcaacagcagcagcaaattcagcagcagcagcaacaacggacGAGCAAATCAATGAAACGCAAACGTGAACTGAAATGCGAATACTGCGCCTCCACATtcattagcaacaacaacctgcGACGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAACCTGCCAGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTGGCGTGTCGCCGTTGCGGCGATCTACAATTTGATACCAAAGAGCAGTGGATCGAGCATAAGCTGGCCGATGCGAGAGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGACGATGTGATTGTGCCGGTCGCCACCAAGCCACCAGCACCGGCAGCAGTAGCGGCCAATAAaactgcagcggcagcagcagcaacaacaacaacagcggcaacaacaccaacaattgCCTACGCAGCAAAACATGCAGCTGctaaatcagcagcagcagcagcaacggcttCGACGAAgtcaacgacaacagcagcaaaaaaactGAAGGctaaacaacagcagcaggaggatgATGACCTGCAGCTGGATGATGAGAAGCTaacgaagcagcagcaacaggaagaggaggaggatgatAGTGATATGGATGATGATAGCGTTAGTGGcaatgatgatgaggagggCAGCACCAGTGCtgacgatgatgataatgatgacgatgatgatgaggagggCGATgtcgatgacgacgatgatgatgatgacgaagaAGACAACGACAATggtgaaaatgttgttgcacagcagcaaatactgcaacaacagcctcaaaatacaaacaccaataacaacaacaacaacaacagcagcagcagcagcagtagcagcagcagcggcgctaTTGAAAATGACGATGATCTCATTGAGGAGGTGATCGAGGATGATGGCATTGTCGAGCAGCTGGAcgtcgatgatgatgaggaagacgatgatgacgatgacgacgatgacggcgatgatgatgatgatggcgaaGATGATGACGACatcgatgaggatgaggatgaggatgatcAGCGGAGACGTCACAATTTCGACTACTCGCGCACCGCCAGCGCCAAGCTAAATGGCAACGGTGGCAAACAGTCTGTGACAAAATCAAAGACACGgccacagttgcagcaacagttgcagacACAGCCAATGTTGGTCATGCACAGTAGTAGCAGTCGCCACGTGAATGATGGCGAGGAGGAGGTGGATGAtatggatgatgatgatgatgacgatgatgttgTGGGTGAAGCGATGACAATTGATGATATTATTGAAGAGGATGATGGTGTGGATGATGACGAAGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgatgacgacgaagatgatgatgacgacgatgaggatgatgatgttgaGGAGGGCatggacgatgatgatgatgaggatgatgatggggACGACGACGATGCCGATAACAATACCAATATTGGCAACGGTGTTGGCCGTGTGGGTCGAAAAgatgctgatggtgatggGAATGGTGATGGgaatggtgatggtgatgttgatgttgatggtgGTACATCATCATCTGACAGCGAGTCGACAACATCGCATTCAACTGGTGAGCGgcgtaataaaaaaaataaaaaaataaaagtagttGCATCAGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTTGATTCCCAGGAGATACTTCAGACACATATTAAAAGTCATTTCCTCAATGGGCCATTGGCGGGGAGCAGGagcaccaacaataacaacagcaacaacaacagtagtaacagcagtagcaacagcagtaacaaaaTCAATACCAAAAAGTCCGGCTTGGATGCAacgaagacaacaacaacaacaacaaaaacagcaacaacagttaagGCTGCTGCAGTAGCGGACGCTGCAACGGGCTTCAACTGA
- Protein Sequence
- MCDAATTTTTAAATTTAAAVAQGTGVVGDTAMEEQNQRERQSCCRLCLAPASECISIINSYAADKEPLATKIHNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRHWLETDKTKQQTLLGYLDLNRAENGSTIEQQQQQQQQHDLKMDSATSAAEKASAANILDGIPQLKKRKSLTVYVSPSPKQQQQAQQQQSQQHSQQQHATGARSTTKTSAAASAVAESQQTLQTLLLQVPTAAATLATSSTQQQQQQRKYQQQLQQQRGKQQQHQHHQQQQRQSRVRQPRRQQQAATSKFRSKLYMPLDISVPALPALLPPPPTAVADAASLPLPLSLPLDFSQNPNPNPNPNQNLNQRYTSSVLVPQPQAPPMPLPPPVATMSSNEAAIGGATTTATAVTTPLLMPPLPAVPIKDEPQDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAVVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATRAAAGGNISAQKYRQVVMNTFSKCENGGFDYDNPEQYQQLLSQDKIDFIQENSEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVYANANANAPSTSTAAITTAVQQQQQQQLMTANETAATTTATTSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNSSSTATTSGLDHSSGKRSLLGALGIGIVSQSSNDELRSSNNNNHNNNNNNNSNNNNNNNTPLTSTPKLPIVTGAATAGGGGGAAATSGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDDEGCNIAKKMRLDDSSNNSSSINISSIANQQKECLICNAVFSNNIGLSNHMRSHYTASITTSAALAVANRMTPKSLTITATPPLEVTSTAATASATSSLATCTTNTSTAAAATKTTTSTTTAAGLAAVAASSSGAVASTATASGSGSSSGNLPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSHVSDSSSTAAGGAGAAGKSSLKSATATTSSTAELVADTSSSSGTGGAANLLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVPDPAECTLCRKMFFDRQMLEKHTPTCNRKPITATGAHQQDQQQQLQQQQQQQQQLLQLQLQHNQRLIFKHKTGDDDDEEEDDDQLLLMDDGGGGSNDSNAGNASAAAAAAAAAAVTINPSTMKIRIPEVACTICGARFTDQEIFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVEHQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQIPTNDGEATTLNNSSNNSSSNNNNNNLVSSSSMLHLRELHAVGLMPNQQQHQKQQQQQQQQQQIQQQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLACRRCGDLQFDTKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKDDVIVPVATKPPAPAAVAANKTAAAAAATTTTAATTPTIAYAAKHAAAKSAAAAATASTKSTTTAAKKLKAKQQQQEDDDLQLDDEKLTKQQQQEEEEDDSDMDDDSVSGNDDEEGSTSADDDDNDDDDDEEGDVDDDDDDDDEEDNDNGENVVAQQQILQQQPQNTNTNNNNNNNSSSSSSSSSSGAIENDDDLIEEVIEDDGIVEQLDVDDDEEDDDDDDDDDGDDDDDGEDDDDIDEDEDEDDQRRRHNFDYSRTASAKLNGNGGKQSVTKSKTRPQLQQQLQTQPMLVMHSSSSRHVNDGEEEVDDMDDDDDDDDVVGEAMTIDDIIEEDDGVDDDEVVGVGGGVVEDDDDDDEDDDDDDEDDDVEEGMDDDDDEDDDGDDDDADNNTNIGNGVGRVGRKDADGDGNGDGNGDGDVDVDGGTSSSDSESTTSHSTGERRNKKNKKIKVVASAAHGAAADQSNSSYTCDLCQLCFDSQEILQTHIKSHFLNGPLAGSRSTNNNNSNNNSSNSSSNSSNKINTKKSGLDATKTTTTTTKTATTVKAAAVADAATGFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00596083;
- 90% Identity
- iTF_00486003;
- 80% Identity
- -