Basic Information

Gene Symbol
hang
Assembly
GCA_035042305.1
Location
JAWNLN010000066.1:6016868-6033874[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.38 24 5.5 1.0 3 23 513 534 512 534 0.93
2 18 1.1 68 4.1 3.2 3 22 641 660 639 660 0.89
3 18 0.00081 0.051 13.9 3.3 1 22 767 788 767 790 0.90
4 18 0.093 5.8 7.5 0.1 2 21 802 821 801 822 0.93
5 18 0.00094 0.059 13.7 0.2 2 23 974 996 973 996 0.95
6 18 0.0027 0.17 12.3 0.1 1 23 1004 1027 1004 1027 0.96
7 18 0.00021 0.013 15.8 0.2 2 23 1114 1135 1113 1135 0.97
8 18 0.00039 0.024 15.0 2.9 2 23 1268 1290 1267 1290 0.97
9 18 0.03 1.9 9.0 0.2 2 23 1299 1321 1298 1321 0.95
10 18 0.0018 0.11 12.8 0.3 1 23 1334 1357 1334 1357 0.97
11 18 0.00017 0.011 16.1 1.1 1 23 1417 1439 1417 1439 0.99
12 18 0.0026 0.16 12.3 0.9 1 23 1447 1470 1447 1470 0.96
13 18 0.63 39 4.9 0.3 2 19 1478 1495 1478 1496 0.94
14 18 0.0021 0.13 12.6 0.3 3 23 1609 1629 1608 1629 0.98
15 18 0.0014 0.089 13.2 0.1 1 23 1664 1686 1664 1686 0.97
16 18 0.0008 0.05 14.0 0.6 2 23 1772 1794 1771 1794 0.93
17 18 0.031 1.9 9.0 1.6 3 23 1850 1870 1850 1870 0.97
18 18 9.1e-05 0.0057 16.9 2.1 1 23 2326 2348 2326 2348 0.99

Sequence Information

Coding Sequence
ATGTGCGAcgctgccacaacaacagcagcagcaacaacaacaacaacaacaactgcagcagcagtagcacaaggaacaggaacaggagctGCTGGCGATACAGCGATGGAAGAACATAATCAACGAGAGCGACAAAGCTGCTGTCGCCTGTGCCTTGCGCCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACATCGGTGGATCGTCTGTCGTTGCATATTTGCCATGCCTGCATCAGTTATTTGAACTCATGGCAGAGCTTCAAGAATCGCTGCCTCAGCTCACAGTCGAAGCAGCGCCAATGGCTGGAGACGGACAAAACCAAGCAGCAGACGCTACTCGGATACTTGGATTTGAACAGGGCCGAGAATGGCAGCACCattgagcaacagcaacaacagcagcagcagcagcacgattTAATAATGGATTCAGCGACGTCTGCAGCTGAAAAGGCGTCCGCTGCCAACATTTTGGATGGCATACCTCAGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCGAGTCCCAAGCAACCGCAgcaagcacagcaacaacagtcgcagcaacaTTCTCAGCAACAGCATGCAACAGGGGCAAGATCAACAACGAAAACAtcagctgcggcggcggcggtggcagaATCgcaacaaacaatgcaaaccCTTTTATTACAGGTgcccacagcagcagcagcagcagcgacattGGCAACGTCgtcaacacagcaacagcagcgcaagtatcaacagcagcagcaacgtggcaagcagcagcaacatcagtatcatcaacagcagcagcgacagagtCGCGTTCGTCAACCgcgacgacagcaacaagcgGCAACGAGCAAATTCAGGAGCAAGTTGTATGTGCCACTGGATATATCGGTGCCAGCACTGCCAGCACTGCCAGCACTGCCAGCGCTgttgccgccaccgccgccagctgttgctgatgcagcgtcgttgccattgccgctgtcgctgccacTTGATTTCAGTCagaatccgaatccgaatccaaATCCCAATCCAAATCAAAATCTAAATCAGAGATATTCAAGTAGCGTTTTAGTGCCGCAGCCGCAGGCGCCGCcgatgccgctgccgccgccagtTGCAACAATGAGCAGCAACGAGGCTGCCATTGGtggtgcaactgcaactgcaaccgcaGTCACGACTCCATTGCTCATGCCGCCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCCTGGACGATACGGATGATGACTTTCAAATGAAGTGCATAGACGAATCCGATGATTTGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAAGGCGATGTGCCACTAAATACCTCCGACTATGATTATACGGCTCAGCATGGCGTGACCGCTGTTGTGGCGGCTGCATCGCTGCCGGCCAGCGCCGTTGCAAATGTGGCCGCCGCTGGCGACTCGAAGGTGGCCAGCTGCCGGGCGTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGTCGCCATGAGCGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCAATCACCAAACCGACACCGGCCCTCGCCGCCGCCTTGGAAATTCAGCGTGCAGCGGCGGCCGCAGCGGCAACCGCAGAGGCAACGCGTGCCGCTGCCGGTGGCAATATATCCGCGCAAAAGTATCGACAGGTGGTGATGAACACGTTCATGAAATGCGAAAACGGTGGCTTCGACTACGACAATCCCGAACAGTATCAGCAGCTGTTGTCGCACGACAAGGTCGACTTCATACAGGAGAACATCGAGTTTCTAGAACAGTTCCAGACGATGACGTGTCGCTGTTGCAACAAGTACTTCAACACGTACAAGAACTTTATGGCGCACGTACGCAAAAAGTATCCGTTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTCAACGCACTGCGCACCAAACAGCCAAACTTTGTccatgccaatgccaatgccaatgccccATCCACTTCCACTGCAGCCGCATCGACTGCTgtacaccagcagcagcaacagttggtgACAGCAAacgaaacagcagcaacaacaacaccaacggATCGTCCGGAGAAGTTGCGTGCCAAGGAGCTGCTGGTTAACAAGGTGTACGAGTGCAAGCTGTGCCCAAAGGGTTTTCGCACAAAGCACGAGTTCCGCACCCATGTCTACGATAAGCATGCAGATGTTCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTCTGTGGCCTGGACTTTGCCGATCCTGTTGATCGTCGAAGACACTACAATAACATGGATTGCATTGTCCGGCTGCGCTGCATGACCTGCGGTGCGAAACTGGAGACGCATCAGCGTTTCCTCGACCATGTCTATCAGGATCATTTGGGTGGGGTGAGCAGTGATAATGCATCGTCCACGGCGACGACCAGCGGCTTGGATCATTCGCCCGGCAAGCGCAGTTTGCTGGGCGCCCTTGGCATCGGCGTTGTCAGTCAATCATCCAATGATGAGtcgcgcagcagcaacagcaacaaccacaacaataacaataataataacagtaacaacaacaataatacgcCTCTAAACTCGACACCTAAACTACCAACcgtagcaggagcagcaacagctggtggaggaggaggaggaggaggaggagcagcagcagcagcaaccagtgGCGGATCGACAACATCGGCCAGTCGAGATGCACCCAAATCACAGTATTTCTCACGAATGCCACAGGTCTGTCCGATCTGTGGCCAGCAgtacaacaactataacaatgTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCAGAGACATATAAGTGTGTCCGCTGTGGATTGGGCTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTTGACAAGAATCGGCATTCGGGCGGCTTTGAATATATTGTGAATGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCgatgatgatgacgatgaaggCGGCAACATTGCCAAAAAGATGAGACTCGAtgatagcagcaacaacagcagcatcaacatgAGCAGCATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAATATTGGTCTATCGAATCATATGCGTTCCCATTACACAGCATCGATAACGACAAGTGCTGCTCTGGCGGTTGCCAATCGCATGACGCCCAAATCGCtgacaataacagcaacgcCACCGCTGGAGGTGACatcgacggcggcggcggcatcggcatcggcaacATCATCATTGGCGACGTGCACGACAAATACATcgactgctgcagctgctgcagttactgcaacaaagacaacgacgtcaacaacaactgcagttggagttgcagcagtggcagcatcatcatcaggaGCGGTCGCCTCAACAGCATCAGGATCAGGCTCATCATCCGGCAACTTGCCGCCAGCAATGGTGCATCAGACGGCACAGGAGCAGGCGGTATTCCGTCGCAGCCTGGATCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGCATCTGTCAGCGCAGATTCAGTTCGAAGAAATCGTACCGCTACCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTTGCCTACGAGAAGGGGCTCAAGGTGCATCTGTTTAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACGGTCTACAGTTCCGAGCTGGaattgcagcagcacaagcgCAGCGTACACAAGTCACACGCCAGTgattcatcatcatcggcagctggtggtggtggtgctggtgctgctggcaaATCATCATTGAAATCTGCTACTGCAACTACCTCATCGACAGCTGAGCTTGTCGCAGACACATCATCCTCCTCGGGCACGGCGGGTGCGGCCATTTTGCTGCCGCTTTACTGGTACCAGTGCAAATATTGTCCATCCAATTTCAACACCAACAAGAAACTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGCCTCTGGGTGCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCCGCCGAGTGCACGCTGTGCCGCAAGATGTTCTTCGGTCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGTGCTCATCAGcaggatcagcagcagcagcagcaacaacaacagcagcagcagcagcagcaacaacaacagctgcagctgcaacatcaTCAGCGACTCATCTTCAAGCACAAAAcgggcgatgatgatgacgaggaggaggacgatGAGTTGCTGCTAATGGACGAtggcggtggcggcagcaATGATAGCAATGCTGGCAATGCCATTGcatcagccgcagcagcagcagcggcagcagcagcagcagcagcagtcacaatAAATACGAGCACAATGAAGATACGCTTTCCGGAGGTTGCATGCACCATTTGCGGTGCCCGTTTCACCGATCAGGAAATATTCACCAAGCACATACAGAAACACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCGATGTTCGATGATGGGCCAGCGGATGCCGGACAATTTCAGGTTGAGCACCAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCACCAAGACGTTCCCGCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCAATCAACGACGGCGAAGCGACAACGctgaacaacagcagcaacaacagcagcagcagcaacaacaacaacaacaacaacaattcgctGAGCTCAACATCGATGCTGCTTCTACGCGAACTGCATACGGTGGGCCTGATGcccaatcagcagcaacaccagaaacaacaacaacagcagcagcagcagcaacaacggacGAGAAAATCAATGAAACGGAAACGTGAACTGAAATGCGAATACTGCGCCTCCACAttcattagcaacaacaacctgcGACGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAACCTGCCAGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTGGCGTGTCGCCGTTGCGGCGATCTACAATTTGATACCAAAGAGCAGTGGATCGAGCATAAGCTGGCCGATGCGAGAGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCACCAATCACATTAGCCATCATCTCAAGGAGGATGTGATTGTGCCGGTCGCCACCAAGTCACCAGCATCGGCAGCCAATAAaactgcagcggcagcaacagcagcagcaacaacaacaacaacaacaacagcggcaacaacaacaataattacctacgcagcaacagttgcagctgccaaatcagcagcagcagcagcagcaggaacggCGGCGACGAAgtcgacgacaacagcagtaaAAGAACTGAAggccaaacaacagcagcaggaggatgATGACCTGCAGCTGGATGATGAGAAGCTaacgaagcagcagcaccagcagcaacaggaggaggaggaggaggaggatgataGTGATATGGATGATGATAGCGATAGTGGcaatgatgatgaggaggGCAGCACCAGtgctgaagatgatgatgatgatgacgatgatgatgatgacgaagaagaagacaacgacaatgatgaaaatgttgcacagcagcaaatactgcaacaacagcctcaaaatacaaacaccaacaacaacaacaacaacaacagcagcagcagcgctatTGAAAATGACGATGATCTCATTGAGGAGGTGATCGAGGATGATGGCATTGTCGAGCAGCTGGacgtcgatgatgatgaggaagacgatgatgacgatgacgacgacgatgatgatgatgatgatggcgaagacgatgacgacatcgatgaggatgaggatgatcGGCCGAGACGCCTCAATTTCGACTACTCGCGCACCGACAGCGCCAAGCTAAATGGCAACGGTGGCAAACAGTCTGTGGCAAAATCAAAGACACAgccacagttgcagcaacagttgcagaaACAGCCAATGCTGGTCATGCACAGTAGTAGTAGTCGCCACGTCAATGATGGCGAGGAGGAGGTGGATGATAtggatgatgatgttgatgacgatgatgttgTGGATGAAGCGATGACCATTGATGATATTATTGAAGAGGATGATGGTGTGGATGTTGACGATGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgatgatgatgacgacgacgacgacgacgacgaagatgatgatgacgacgatgaggatgatgatgttgaGGAGGAAATGGacgatgattatgatgatgatgatggggaCGACGACGATGCCGATGTCAACAACACCAATATTGGCAACGGTGTTGGCCGTGTGGGTCGAGaagatgctgatgatgatggtgatggggATGGtaatggtgatggtgatggtgatggtgatggtgatgttAATGGTGGTACATCATCATCTGAGAGCGagtggacaacaacaacatcgcaTTCAACTGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTGCAGACACATATTAAAAGTCATTTCCTCAATGGGCCATCGGcggggagcagcagcaacagcaacaagagcaacggCGCCAGCAGGagcaccaacaataacaacagcaacaacaacagtagtaacagcaacaacaacagcaacagcagtaacaaaaTCAATACCAAAAAGTCCGGCTTGGATGCAacgaagacaacaacaacaacagcaacaacagttaagGCTGCTGCAGTAGCGGACGCTGCAACGGGCTTCAACTGA
Protein Sequence
MCDAATTTAAATTTTTTTAAAVAQGTGTGAAGDTAMEEHNQRERQSCCRLCLAPASECISIINSYAADKEPLATKIHNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLETDKTKQQTLLGYLDLNRAENGSTIEQQQQQQQQQHDLIMDSATSAAEKASAANILDGIPQLKKRKSLTVYVSPSPKQPQQAQQQQSQQHSQQQHATGARSTTKTSAAAAAVAESQQTMQTLLLQVPTAAAAAATLATSSTQQQQRKYQQQQQRGKQQQHQYHQQQQRQSRVRQPRRQQQAATSKFRSKLYVPLDISVPALPALPALPALLPPPPPAVADAASLPLPLSLPLDFSQNPNPNPNPNPNQNLNQRYSSSVLVPQPQAPPMPLPPPVATMSSNEAAIGGATATATAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDLMDPTMFLERSEHEGDVPLNTSDYDYTAQHGVTAVVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATRAAAGGNISAQKYRQVVMNTFMKCENGGFDYDNPEQYQQLLSHDKVDFIQENIEFLEQFQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVHANANANAPSTSTAAASTAVHQQQQQLVTANETAATTTPTDRPEKLRAKELLVNKVYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCGAKLETHQRFLDHVYQDHLGGVSSDNASSTATTSGLDHSPGKRSLLGALGIGVVSQSSNDESRSSNSNNHNNNNNNNSNNNNNTPLNSTPKLPTVAGAATAGGGGGGGGGAAAAATSGGSTTSASRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDDEGGNIAKKMRLDDSSNNSSINMSSIANQQKECLICNAVFSNNIGLSNHMRSHYTASITTSAALAVANRMTPKSLTITATPPLEVTSTAAAASASATSSLATCTTNTSTAAAAAVTATKTTTSTTTAVGVAAVAASSSGAVASTASGSGSSSGNLPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSHASDSSSSAAGGGGAGAAGKSSLKSATATTSSTAELVADTSSSSGTAGAAILLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFGRQMLENHTPTCNRKPITATGAHQQDQQQQQQQQQQQQQQQQQQLQLQHHQRLIFKHKTGDDDDEEEDDELLLMDDGGGGSNDSNAGNAIASAAAAAAAAAAAAAVTINTSTMKIRFPEVACTICGARFTDQEIFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVEHQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQIPINDGEATTLNNSSNNSSSSNNNNNNNNSLSSTSMLLLRELHTVGLMPNQQQHQKQQQQQQQQQQRTRKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLACRRCGDLQFDTKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLTNHISHHLKEDVIVPVATKSPASAANKTAAAATAAATTTTTTTAATTTIITYAATVAAAKSAAAAAAGTAATKSTTTAVKELKAKQQQQEDDDLQLDDEKLTKQQHQQQQEEEEEEDDSDMDDDSDSGNDDEEGSTSAEDDDDDDDDDDDEEEDNDNDENVAQQQILQQQPQNTNTNNNNNNNSSSSAIENDDDLIEEVIEDDGIVEQLDVDDDEEDDDDDDDDDDDDDDGEDDDDIDEDEDDRPRRLNFDYSRTDSAKLNGNGGKQSVAKSKTQPQLQQQLQKQPMLVMHSSSSRHVNDGEEEVDDMDDDVDDDDVVDEAMTIDDIIEEDDGVDVDDVVGVGGGVVEDDDDDDDDDDDDDEDDDDDDEDDDVEEEMDDDYDDDDGDDDDADVNNTNIGNGVGRVGREDADDDGDGDGNGDGDGDGDGDVNGGTSSSESEWTTTTSHSTAAHGAAADQSNSSYTCDLCQLCFDSQELLQTHIKSHFLNGPSAGSSSNSNKSNGASRSTNNNNSNNNSSNSNNNSNSSNKINTKKSGLDATKTTTTTATTVKAAAVADAATGFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00596083;
90% Identity
iTF_00486003;
80% Identity
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