Basic Information

Insect: Drosophila athabasca
Gene Symbol: -
Assembly: GCA_008121215.1
Location: CM017793.1:40152070-40155302[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00031 0.021 15.0 6.7 1 23 175 198 175 198 0.97

2 15 0.00024 0.016 15.4 2.4 1 23 242 265 242 265 0.96

3 15 0.004 0.28 11.5 5.9 1 23 330 353 330 353 0.96

4 15 5.5 3.8e+02 1.6 1.1 1 20 499 518 499 520 0.88

5 15 0.012 0.79 10.1 0.5 1 23 529 551 529 551 0.94

6 15 0.00015 0.01 16.0 0.7 1 23 558 581 558 581 0.96

7 15 0.00062 0.042 14.1 0.8 2 23 590 611 589 611 0.95

8 15 0.0029 0.2 11.9 0.1 2 20 638 656 637 661 0.90

9 15 0.0034 0.23 11.7 1.2 1 23 696 719 696 719 0.95

10 15 2.4 1.6e+02 2.8 1.2 3 22 728 747 726 747 0.95

11 15 0.01 0.68 10.3 1.2 1 23 756 779 756 779 0.97

12 15 3.2e-05 0.0022 18.1 0.1 1 23 801 824 801 824 0.97

13 15 0.03 2.1 8.7 0.2 1 23 834 856 834 856 0.94

14 15 5.2e-05 0.0035 17.5 3.7 1 23 862 884 862 884 0.99

15 15 5.3e-06 0.00036 20.6 3.2 1 23 890 912 890 912 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00031	0.021	15.0	6.7	1	23	175	198	175	198	0.97
2	15	0.00024	0.016	15.4	2.4	1	23	242	265	242	265	0.96
3	15	0.004	0.28	11.5	5.9	1	23	330	353	330	353	0.96
4	15	5.5	3.8e+02	1.6	1.1	1	20	499	518	499	520	0.88
5	15	0.012	0.79	10.1	0.5	1	23	529	551	529	551	0.94
6	15	0.00015	0.01	16.0	0.7	1	23	558	581	558	581	0.96
7	15	0.00062	0.042	14.1	0.8	2	23	590	611	589	611	0.95
8	15	0.0029	0.2	11.9	0.1	2	20	638	656	637	661	0.90
9	15	0.0034	0.23	11.7	1.2	1	23	696	719	696	719	0.95
10	15	2.4	1.6e+02	2.8	1.2	3	22	728	747	726	747	0.95
11	15	0.01	0.68	10.3	1.2	1	23	756	779	756	779	0.97
12	15	3.2e-05	0.0022	18.1	0.1	1	23	801	824	801	824	0.97
13	15	0.03	2.1	8.7	0.2	1	23	834	856	834	856	0.94
14	15	5.2e-05	0.0035	17.5	3.7	1	23	862	884	862	884	0.99
15	15	5.3e-06	0.00036	20.6	3.2	1	23	890	912	890	912	0.98

Sequence Information

Coding Sequence: ATGACCCGGACCTGCAGAATCTGTGGCGATGCAAATGGACGCTACTGGGTCGAGACGCCGGTGGAGAAGTATGCCGAGAAGACCTTCAGTCAGATTTTGCTGGAGCTAACCAAGATTGAGTTGACCATGGTCCAGGCCGAGAAGTTGCCCCACTGGCTGTGCTCCAGTTGCTCCCAGAAGCTGGAGAACGCCTACGATTTTGTGTTGCAAGCGAAACAGACGCACAAACTGTGGCTGCAACAGCTGGAGGATACGGGGCAGATAATGAGCTCTGGGGGATCCTTGGAGTGCCTGCGGGAGACCCCCATACATCTGTTTGAGATCGAGGGAGCTGCCATCAAAACCGAAGCGTTAGAGTCAACGGTTGCAGATGCCGGGGATAGCTCCTGCGATCCTCTAGTCCGCACACGCATCAAAAAGCGTACCATCTTTCACTTCAGCGATACGGAAGATGACCAGGATGATGTGCCGCTTAGGCAACGCAGGACGGGCACCCAAGCGAACAGCTCATCAGCAAAGGTGCACAAGTGCAATCTGTGCGGCAAATCCTTCAGATATATCACGAATCTCTATCACCACAAGAAAAGAGATCACGGCTATCCAGGGCAATCAAAAAGTGAGAGCACCGAATCATACCCGGAAAAGACACAAAAAAGCGCCGTGGCAGCGCGGGATAGTTCCAATTTGGAACAaaacgatgatgatgaggatgatgacAGCTACTACAAATGCGATCAGTGCGACAAATCCTACAAGCACATAATGTTGCTTATCAAGCACAAGCAAAATGCCCATGAAGCTAATCAACAGCCAATCCAATCTGGGGCCAAACGAAGAAACAGAAGGGACGTGGGTGAGGCAGCAAGTCCAGCTCCTTCCGGGAAATACACACAACGAGCCAGAATCAGCACCGATACCCTGGTCCATAGCCTCATCAAAGAAGTGGAGCTGTCTGATGAGGATGGAAACAGCGGCAGCGATAACTACTACAAGTGCGATCAGTGCCACAAATCGTACAAATACATTGTAAGCCTCAtcaagcacaagcacaaggAACATTCGGAAGCTGACAAAAACTGGGACGACGAGGACAATCATCCATTGGCCTCCACATCTGCCTGCGCCACTGTCGCCTCAGGCTCAGGCTCTCCCACGAAGGCCTCGCGAATCAATCGTCGCGCGCACGGTGAGCCCATCGAACGCATTGCCGAGGGTTTCTTCAAAACGGCTGTGGAGTCCACTGTGGAGGGTTTGAAGAGCAGAATTCTGCACGATCTGAGGATAGGTGCTTTCGGACGCTTCTATTCCATTACCAACGAGGCGCGCTACGAGATGAGTCTGGACAGCTCGGACACTGATAGCGATGGCGATGCAGATGTTGTACTGAGACGAAGCTATGCCTGCGAGCTATGCGACTCTCCGGAGGCCAGGTGGCCGCGCAAGTATCAGCTGCACGAGCATCACAGACAGCAGCACACCTGGGAAGAGGCTCCCCATGTCTGCCAGCGCTGCGACTCGCGTTTCCTCAGTCTCCAGCTGCTGGAGCATCATACCCTACAGCTCTGCCAGAACACTCTGAAGCGATACATGTGCGACAAGTGCCCGCAGCGCTTCTTCTGGCGAAGAAATCTGCGTGCCCATCTGGTGGAGCACAAGAGCAAGCAAGACAGCTATCCGTGCGACCAGTGCCAGCGCAGCTTTCAGGATAAAAGCGCCGTGACCAAGCACAAGCTGATGATGCATCGCGATGAAAAGAATCAGCTTATTCCCTGCCGCTGGTGCTCACGGACCTTCTATCGTCCCGCCCTTCTGCACAAGCATGTCGAACGGCATGGCTTCACCGGCGACGATTTGCCCCTGGCAGAGACATTGCTGGCCGATGCAGCCAAGCCATCGGGCCCAAAGACTGTGCAGTGCAAGATCTGTGACCTGCAGTTCGTAAGCGTTGCAGATCTGCGCCGCCACAATGCCATGCTGGGCCACAGTGAGCGTCTAACCGAGTACATGATCAGCACCGAGGCTGGCTTCGAGCTGTTATTGGAGGACACAGATGACAGCGATGACGACACTACGGGGGGCAGGTCCTACTCCTGCGATCTCTGTCAGATGACGTTCCGTCGCCGCAGGGAGATAAGCGAGCATCAGTATTCACTGCACGCCTTTGACAAGTTGCCCTATGGCTGCAAACATTGCATTTATAAGACCGTCGATAAGCTCATGTTGGAGCATCATCTGCGCACACAATGCCTGAACAACGAGAAGCCGTTCAGCTGCTCCCGCTGCAAATACAAGTTCATGTGGAAGGAGAACCTGGAGCAGCACATTGCCACTCAGCATCCCAAGCAGCCGCCCACCCAAGAGCAGTCGGCCATGCCCTTGAGGAGAAGACGACGCTTCAGATATCAATGCCCTCAGTGCTGGCGCTCGTTTGTGGTGCAGCCCAGCCTTGATAAGCATATAAGGGACATGCATGTGGCCAAGAGGAATCCGGGCAAGAAATACCTCTGCTCGCTGTGTGGCCTGGAGTCGCTGACGCCCAACAAGCTGAACATCCATATGCGTCGCCACAACGGAGAAAAGCCCTTCAAATGCGATCTCTGCGACATGCGCTTCACAGTCCACTACGAGCTGAAGGTCCATCGGCGGAAGCACACCGGCGAGCGGCCCTACCAGTGCACCTTCTGTGACAAGCACTTTGCGCGACCCGACAAACTCAGACGGCATGTCTACATGCACAGTGCTCGTCGCTAG
Protein Sequence: MTRTCRICGDANGRYWVETPVEKYAEKTFSQILLELTKIELTMVQAEKLPHWLCSSCSQKLENAYDFVLQAKQTHKLWLQQLEDTGQIMSSGGSLECLRETPIHLFEIEGAAIKTEALESTVADAGDSSCDPLVRTRIKKRTIFHFSDTEDDQDDVPLRQRRTGTQANSSSAKVHKCNLCGKSFRYITNLYHHKKRDHGYPGQSKSESTESYPEKTQKSAVAARDSSNLEQNDDDEDDDSYYKCDQCDKSYKHIMLLIKHKQNAHEANQQPIQSGAKRRNRRDVGEAASPAPSGKYTQRARISTDTLVHSLIKEVELSDEDGNSGSDNYYKCDQCHKSYKYIVSLIKHKHKEHSEADKNWDDEDNHPLASTSACATVASGSGSPTKASRINRRAHGEPIERIAEGFFKTAVESTVEGLKSRILHDLRIGAFGRFYSITNEARYEMSLDSSDTDSDGDADVVLRRSYACELCDSPEARWPRKYQLHEHHRQQHTWEEAPHVCQRCDSRFLSLQLLEHHTLQLCQNTLKRYMCDKCPQRFFWRRNLRAHLVEHKSKQDSYPCDQCQRSFQDKSAVTKHKLMMHRDEKNQLIPCRWCSRTFYRPALLHKHVERHGFTGDDLPLAETLLADAAKPSGPKTVQCKICDLQFVSVADLRRHNAMLGHSERLTEYMISTEAGFELLLEDTDDSDDDTTGGRSYSCDLCQMTFRRRREISEHQYSLHAFDKLPYGCKHCIYKTVDKLMLEHHLRTQCLNNEKPFSCSRCKYKFMWKENLEQHIATQHPKQPPTQEQSAMPLRRRRRFRYQCPQCWRSFVVQPSLDKHIRDMHVAKRNPGKKYLCSLCGLESLTPNKLNIHMRRHNGEKPFKCDLCDMRFTVHYELKVHRRKHTGERPYQCTFCDKHFARPDKLRRHVYMHSARR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00575022;
90% Identity: iTF_00517914; iTF_00603530; iTF_00575022; iTF_00473968; iTF_00564113; iTF_00474674; iTF_00471800; iTF_00580953; iTF_00484639; iTF_00611520;
80% Identity: -