Dazt008955.1
Basic Information
- Insect
- Drosophila azteca
- Gene Symbol
- -
- Assembly
- GCA_005876895.1
- Location
- VCKU01000003.1:3376585-3379779[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.5e-05 0.0029 17.9 4.8 1 23 175 198 175 198 0.97 2 13 0.0044 0.36 11.3 2.0 1 23 240 263 240 263 0.95 3 13 0.004 0.33 11.4 4.1 1 23 328 351 328 351 0.96 4 13 0.00048 0.039 14.3 1.1 2 23 409 430 408 430 0.97 5 13 4.9 4.1e+02 1.7 1.1 1 20 543 562 543 564 0.88 6 13 0.01 0.86 10.1 0.5 1 23 573 595 573 595 0.94 7 13 0.00013 0.011 16.1 0.7 1 23 602 625 602 625 0.96 8 13 0.00055 0.045 14.1 0.8 2 23 634 655 633 655 0.95 9 13 0.0028 0.23 11.9 0.1 2 20 682 700 681 705 0.90 10 13 0.003 0.25 11.8 1.2 1 23 740 763 740 763 0.95 11 13 2.1 1.8e+02 2.8 1.2 3 22 772 791 770 791 0.95 12 13 0.0089 0.73 10.3 1.2 1 23 800 823 800 823 0.97 13 13 2.9e-05 0.0024 18.2 0.1 1 23 845 868 845 868 0.97
Sequence Information
- Coding Sequence
- ATGACCCGGACCTGCAGAATCTGTGGCGATGCAAATGGACGCTACTGGATCGAGACGCCGGTGGAGAAGTATGCCGAGAAGACCTTCAATCAGATTTTGGTGGAGCTAACCAAGATTGAGTTGACCATGGTCCAGGCCGAAAAGTTGCCCCACTGGCTGTGCTCCAGTTGTTCCCAGAAGCTGGAGAGCGCCTACGATTTTGTGTTGCAAGCGAAACAGACGCACAAACTGTGGCTGCAACAGCTGGAGGATACGGGGCAGATAGTGAGCTCTGGGGGATCCTTGGAGTGCCTGCGGGAGACCCCCATACATCTGTTTGAGATCGAGGGTGCTGCCATCAAAACCGAAGCGCTAGAGTCAACGGTTGCTGATGCCGGGGATAACTCCTGCGATCCTCTAGTCCGCACACGCATCAAAAAGCGTAACTTCTTTCAGTTCAGCGATACGGAAGATGACCAGGATGATGTGCCGCTTAGGCAACGCAGGAAAGGCAGCCAAGCTAATAGCTCATCAGCAAAGCTGCACAAGTGCAATCTGTGCGGCAAATCTTTCAGATATATCACGAATCTCTATCGCCACAAGAAGAGAGATCACGGCTATCCAGGGCATTCAAAAAGCGAGAGCACCGAATCATACCCGggaaaaacacaaaaaatcgCTGTGCAGGATAGTTCCAATTTGGAACAAaacgatgatgatgaggaaGATGACAGCTACTACAAATGCGATCAGTGCGAAAAATCCTACAAGCACATAATGGTGCTTATCAAGCACAAGCAGAATGCCCATGAAGCTACTCAACTGTCGATCCAATCTGGGGCCAAGCGAAGAAACAGAAGGGACGtggctgaggcagcaagtCCAGCTCCTTCCGGGAAATACCCACAACGAGCCAGAATCAGCACCGATACCCTAGTTCACAGCCTCATCAAAGAAGTGGAGCTGTCGGATGAGGATGGAAACAGCGGCAGCGATAACTACTACAAGTGCGATCAGTGCCGCAAATCGTACAAATACATTGTAAGCCTCATCAAGCACAAGCACAAGGAACATTCGAAAGCTGACAAAAACTGGGACGACGAGGACAATCAACCATTGGCCTCCACATCTGCCTTCGCCACTGTCGCCTCAGGCTCAGGATCTCCCACCAAGGCATCGAGAATAAATCGTCGCGTTCAGGGTTTCGACCTGCATCGCTGCCAGCCGAATGGTGCGAAGGAAATTCAGTGCATGATCTGTCTGCGGAAATTCACTAAATTGCGTGAGCTGAGAGATCACCTCAGGTCGCATCCCACGGACTTTAATTTCCAGGCGCATGGTGAGCCCATCGAACGCATTGCCGAGGGCTTCTTCAAGACGGCTGTGGAGTCCACTGTGGAGGGTTTGAAGAGACGAATTCTGCACGATCTAAGAATTGGTGCCTTCGGACGCTTCTATTCCATTACCAACGAGGCTCGCTACGAGATGAGTCTGGACAGCTCGGACACTGATAGCGATGGTGATGCAGATGTTGTTCTGAGACGAAGCTATGCCTGCGAGCTATGCGACTCTCCAGAGGCCAGATGGCCGCGCAAGTATCAGCTGCACGAGCATCACAGACAGCAGCACACCTGGGAAGAGGCTCCGCATGTCTGCCAGCGCTGCGACTCGCGTTTCCTCAGTCTGCAGCTGCTGGAGCATCATACTCTACAGCTCTGCCAGAACACTCTAAAGCGTTACATGTGCGACAAATGCCCGCAGCGCTTCTTCTGGCGAAGAAATCTGCGTGCCCATCTGGTGGAGCACAAGAGCAAGCAAGACAACTATCCGTGCGACCAATGCCAGCGTAGCTTTCAGGATAAAAGCGCCGTGACCAAGCACAAGCTGATGATGCACCGCGATGAAAAGAATCAGCTTATTCCCTGCCGTTGGTGCTCACGGACCTTCTATCGTCCCGCCCTTCTGCATAAGCATGTCGAACGGCATGGCTTCACCGGCGACGATTTGCCCCTGGCAGAGACATTGCTGGCCGATGCAGCCAAGCCATCGGGCCCAAAGACTGTCCAGTGCAAGATCTGTGACCTGCAGTTCGTAAGCATTGCAGATCTGCGCCGCCACAATGCCATGCTGGGCCACAGTCAGCGACTAACCGAGTACATGATCAGCACCGAGGCTGGCTTCGAGCTGTTATTGGATGATACAGATGACAGCGATGACGACACTACGGGAGGCAGGTCCTACTCCTGCGATCTCTGTCAGATGACGTTCCGTCGCCGCAGAGAGATAAGCGAGCATCAGTATTCACTGCACGCCTTTGACAAGTTGCCATATGGCTGCAAACATTGCATTTATAAGACCGTGGATAAGCTCATGCTGGAGCATCATCTTCGCACCCAATGTCTGAACAATGAGAAGCCATTCAGCTGCTCCCGCTGCAAATACAAGTTTATGTGGAAGGAGAACCTGGAGCAGCACATTGCGACTCAGCATCCCAAGCAGCCGCCCACCCAAGAGCAGTCGGCCATGCCCTTGAGGAGACGAAGACGCTTCCGATATCAATGCCCACAGTGCTGGCGCTCGTTTGTGGTGCAGCCCAGCCTCGATAAGCATATAAGGGACATGCATGTGGCCAAGAGGAATCCGGGCAAGAAATACCTCTGCTCCCTCTGTGGCCTGGATGCTCGTCGCTAG
- Protein Sequence
- MTRTCRICGDANGRYWIETPVEKYAEKTFNQILVELTKIELTMVQAEKLPHWLCSSCSQKLESAYDFVLQAKQTHKLWLQQLEDTGQIVSSGGSLECLRETPIHLFEIEGAAIKTEALESTVADAGDNSCDPLVRTRIKKRNFFQFSDTEDDQDDVPLRQRRKGSQANSSSAKLHKCNLCGKSFRYITNLYRHKKRDHGYPGHSKSESTESYPGKTQKIAVQDSSNLEQNDDDEEDDSYYKCDQCEKSYKHIMVLIKHKQNAHEATQLSIQSGAKRRNRRDVAEAASPAPSGKYPQRARISTDTLVHSLIKEVELSDEDGNSGSDNYYKCDQCRKSYKYIVSLIKHKHKEHSKADKNWDDEDNQPLASTSAFATVASGSGSPTKASRINRRVQGFDLHRCQPNGAKEIQCMICLRKFTKLRELRDHLRSHPTDFNFQAHGEPIERIAEGFFKTAVESTVEGLKRRILHDLRIGAFGRFYSITNEARYEMSLDSSDTDSDGDADVVLRRSYACELCDSPEARWPRKYQLHEHHRQQHTWEEAPHVCQRCDSRFLSLQLLEHHTLQLCQNTLKRYMCDKCPQRFFWRRNLRAHLVEHKSKQDNYPCDQCQRSFQDKSAVTKHKLMMHRDEKNQLIPCRWCSRTFYRPALLHKHVERHGFTGDDLPLAETLLADAAKPSGPKTVQCKICDLQFVSIADLRRHNAMLGHSQRLTEYMISTEAGFELLLDDTDDSDDDTTGGRSYSCDLCQMTFRRRREISEHQYSLHAFDKLPYGCKHCIYKTVDKLMLEHHLRTQCLNNEKPFSCSRCKYKFMWKENLEQHIATQHPKQPPTQEQSAMPLRRRRRFRYQCPQCWRSFVVQPSLDKHIRDMHVAKRNPGKKYLCSLCGLDARR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00575022;
- 90% Identity
- iTF_00481028;
- 80% Identity
- -