Crub019528.1
Basic Information
- Insect
- Cotesia rubecula
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scaffold:17559-27399[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-10 3.2e-07 30.3 0.0 2 35 10 44 9 50 0.91 2 3 1e-17 2e-14 53.4 0.0 1 43 142 185 142 187 0.95 3 3 2.2 4.1e+03 -2.1 1.4 6 15 261 270 259 273 0.88
Sequence Information
- Coding Sequence
- CTGAAGCTGAAGGCGCCGACGTGGACTCGACAAGACCTTCAGGACGCAATAGAAGCCGTGGTCACCCAGAAGATGAGATTCACCCAAGCTTCCACAAAATACGGAATACCCAAAGGTACTCTATACGACAACATACTCGGCAAGTCGAAGAGAATGATGGTGCTCGAAGAAGCTGGACTTGATGCCAATGAAGAGAATGCGGTCCTTGAATTTTGTTGTGACATCACCGTTAGTCCTTACAATAGACGAACCAAAAAATCGTTGAACGCTATTTTAAATTTCGTTGAAAAATTACGCAGGCGTCGTGATCCAGCAGATAGCTATCAGTATCAGCTGCAGTCACTCTGGCAGAAGTGTTGGAACACTAATTCTGGGCTGGTGCATAATCTGCGTTTTCGTGAACGTGGACCACTTAAGTCATGGAGACCGGAAACTATGGCTGAAGCGATCTTCAGTGTTTTGAAGGAAGGGCTATCGTTAAGTCAAGCTGCAAGAAAATATGATATTCCATATCCAACATTCGTTCTTTACGCGAATCGAGTGCATAATATGCTTGGACCAAGTTCCGATGGTAGTGCTGATCTCCGGCCGAAAGGAAGAGGCCGACCTCAAAGGATTCTTTTGGGTGTTTGGCCGGACGAGCATATCCGGGGTGTGATTAGAGCGGTGGTATTTCGCGACGGAAATATTGTGAAAGAGGAACCGACCCCGTTATATCCAAGTCTAGCGAATTATGCGTGCAATGGACCAGAGGGCGCGGTAAGCCCTAGCGCTGCTGCGGCTGCTGCGGTTGCCGCGGTCGCCCAAGGTCTCCGACATCAGATGTGCAGTATGGTAGCGGCTGCTCAGTCTCATCCTCACGATATGGTAGCAACGAATCTCTCGGCAAACTTCCAGGCAGCCGTGCAAGTCAGTCAACATCACTTGAACAATAATAGCGGAGCAAGTAATAACAATAACAGCAATAACAACAGAAATTCACCTTTGATGCTCGGACTGCCAAGCCCGGGATCAGGGGGACCACCAGAGAGTCCAATGGAAGGGAGTCCATTGGCGAGTCCACTGGCACCCTTAATGGATCCAGCTCACATACCTAGTAGTGTTGAGGTAGGGATCGGTATCGGGGGATTGGGCGGACTTGGAGGACTCGGTGCAATAAGTGGGATGCATTATAAGCCACAACGTAGTTTCATAAGCCCACGACCTGAAAATATCTTCCAAGAAGACATTGCTGATTTGGTTAAAAGTCAACACGGGCACAAAGACAAAGACAAAGTCCCGGTTAAACTTGAACCACTCACTGATTCTCGTAGTGAACAGTAA
- Protein Sequence
- LKLKAPTWTRQDLQDAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLDANEENAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLRRRRDPADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGSADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGNIVKEEPTPLYPSLANYACNGPEGAVSPSAAAAAAVAAVAQGLRHQMCSMVAAAQSHPHDMVATNLSANFQAAVQVSQHHLNNNSGASNNNNSNNNRNSPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGIGGLGGLGGLGAISGMHYKPQRSFISPRPENIFQEDIADLVKSQHGHKDKDKVPVKLEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380206; iTF_00316690; iTF_01497315; iTF_00266374; iTF_00414217; iTF_00131208; iTF_01001994;
- 90% Identity
- iTF_00380206;
- 80% Identity
- iTF_00380206;