Cfor014521.1
Basic Information
- Insect
- Chelonus formosanus
- Gene Symbol
- bab1
- Assembly
- GCA_028641665.1
- Location
- CM054005.1:1545062-1551143[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-10 3.4e-07 30.2 0.0 2 35 27 61 26 67 0.91 2 2 2.8e-17 2.1e-14 53.2 0.0 1 43 175 218 175 220 0.95
Sequence Information
- Coding Sequence
- ATGATCATCGATCGTAGCAATTATTCTAGACAagCTGACTATTCGAGCCTGCTGAAAGTGAAGGCACCAACATGGACACGTCAAGATCTTCAGGATGCCATTGAGGCTGTTGTTACCCAGAAAATGAGATTCACTCAAGCTTCAACTAAATATGGAATACCTAAAGGAACACTCTACGACAATATTCTTGGCAAATCAAAAAGGATGATGGTACTTGAGGAAGCAGGACTTGATACCAGTGAAGAAAATGCTGTTCTTGAATTCTGTTGCGATATTACAGTTAGTCCTTATAACAGACGTAccaaaaaatcattgaatgcAATACTTAATTTTGTTGAGAAACTTAAAAGACGTAGAGATCCTAGTTTTGTTTTCACTGGTCTAGCAGGATTTAGATGGTGGTGGGCATTCTCAGATAGCTACCAGTATCAACTACAGTCTCTCTGGCAGAAGTGTTGGAACACAAACTCAGGCCTGGTGCACAATTTGCGCTTTCGAGAACGTGGACCATTGAAGTCATGGAGACCAGAAACTATGGCTGAGGCGATCTTTAGTGTTCTAAAAGAAGGACTTTCTTTAAGTCAAGCCGCTAGGAAGTATGACATCCCTTATCCAACGTTTGTACTTTATGCGAATCGAGTGCACAATATGCTCGGACCCAGTACTGATGGAGGAGCTGATCTTCGACCAAAAGGTAGAGGACGACCTCAAAGGATTCTCCTGGGTGTTTGGCCAGACGAACATATCCGGGGTGTGATCCGAGCAGTGGTATTTCGTGACGGATCTATCGTAAAGGATGAGCCAACCCCAATATACCCAAGTCTGGCTAGTTACGCGTGCAACGGGCCGGAGGGCGCGGTGAGCCCTAGTGCCGCTGCGGCTGCTGCGGTTGCCGCGGTCGCCCAAGGTTTACGACATCAAATGTGTAATATGGTAGCTGCTGCTCAATCACATCAACATGATATGGTGGCAACGAATCTCTCAACAAACTTCCAAACGGCTGTGCAAGTCAATCAACTTCACctcaataataatagcaatCCAAGTAATAATAACAGCAGCAGTAATAATAGAAATTCACCGTTAATGTTGGGCTTACCGAGTCCAGGATCAGGTGGACCACCAGAGAGTCCGATGGAAGGTAGTCCATTAGCGAGTCCACTAGCACCTCTTATGGATCCAGCACATATACCTAATAGTGTAGAAGTTGGCATTGGGATAGGAGGAATTGGTGGTATTGGTGGCATGACTTATAAACCTCAACGCAGCTACGTGAGTCCGCGACCCGAAAATATCTTCCAGGAAGACATCGCTGACTTGGTCAAGAGTCCACATGGGCATAGAGATAAAGATAAAGTACCAGTCAAACTTGAACCACTTACTGACTCTCGTAGTGAGCAGTAA
- Protein Sequence
- MIIDRSNYSRQADYSSLLKVKAPTWTRQDLQDAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLDTSEENAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLKRRRDPSFVFTGLAGFRWWWAFSDSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSTDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGSIVKDEPTPIYPSLASYACNGPEGAVSPSAAAAAAVAAVAQGLRHQMCNMVAAAQSHQHDMVATNLSTNFQTAVQVNQLHLNNNSNPSNNNSSSNNRNSPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPNSVEVGIGIGGIGGIGGMTYKPQRSYVSPRPENIFQEDIADLVKSPHGHRDKDKVPVKLEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380983;
- 90% Identity
- -
- 80% Identity
- -