Cglo007680.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- bab1
- Assembly
- None
- Location
- Contig21309:10592-19992[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-10 3.4e-07 30.2 0.0 2 35 25 59 24 65 0.91 2 3 1.9e-17 2.1e-14 53.3 0.0 1 43 157 200 157 202 0.95 3 3 3.9 4.3e+03 -2.1 1.4 6 15 276 285 274 288 0.88
Sequence Information
- Coding Sequence
- AAAGTCCCCACTGCTCCCTGTATTCTAGCCGACTATTCGAGTCTGCTGAAGCTGAAGGCGCCGACGTGGACGCGACAAGACCTTCAGGATGCAATAGAAGCCGTGGTCACCCAGAAGATGAGATTTACCCAAGCTTCCACAAAATACGGAATACCCAAAGGCACTCTCTACGATAACATACTCGGCAAGTCGAAGCGAATGATGGTGCTCGAAGAAGCTGGACTTGATGCCAATGAAGAGAATGCGGTCCTTGAATTCTGTTGTGACATCACCGTTAGTCCTTACAATAGACGAACCAAAAAATCGTTGAACGCTATTTTAAATTTCGTTGAAAAATTACGCAGGCGTCGTGATCCAGCAGATAGCTATCAGTATCAGCTGCAGTCGCTCTGGCAGAAGTGTTGGAACACTAATTCTGGGCTGGTGCATAATCTGCGCTTTCGTGAACGTGGACCACTTAAGTCATGGAGACCGGAAACTATGGCTGAAGCGATCTTCAGTGTTTTGAAGGAAGGGCTATCGTTAAGTCAAGCTGCAAGAAAATATGATATTCCATATCCAACATTCGTTCTTTACGCGAATCGAGTGCATAATATGCTTGGACCAAGTTCCGATGGTAGTGCTGATCTTCGGCCAAAAGGAAGGGGCCGACCTCAAAGGATTCTTTTGGGAGTTTGGCCGGACGAGCATATCCGGGGTGTGATTAGAGCGGTGGTGTTTCGCGACGGAAATATTGTGAAAGAGGAACCGACCCCGTTATATCCAAGTCTAGCGAATTATGCGTGCAATGGACCAGAGGGCGCGGTAAGCCCTAGCGCTGCTGCGGCTGCTGCGGTTGCCGCGGTCGCCCAAGGTCTCCGACACCAGATGTGCAGTATGGTAGCGGCTGCCCAGTCTCATCCTCACGATATGGTAGCAACGAATCTCTCGGCAAACTTCCAGGCGGCCGTGCAAGTCAGTCAACATCACTTAAACAATAATAGCGGAGCAAGTAATAACAATAACAGCAATAACAACAGAAATTCACCTTTGATGCTCGGACTGCCAAGCCCGGGGTCAGGGGGACCACCAGAAAGTCCAATGGAAGGGAGTCCATTGGCGAGTCCACTGGCACCCTTGATGGATCCAGCTCACATACCCAGTAGTGTTGAGGTAGGGATCGGTATCGGGGGTTTGGGCGGACTTGGAGGACTCGGTGCAATAAGTGGGATGCATTATAAGCCACAACGAAGTTTCATAAGCCCACGACCTGAAAATATCTTCCAAGAAGACATTGCTGATTTGGTTAAAAGTCAACACGGGCACAAAGACAAAGACAAAGTCCCGGTTAAACTTGAACCACTCACTGACTCTCGTAGTGAACAGTAA
- Protein Sequence
- KVPTAPCILADYSSLLKLKAPTWTRQDLQDAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLDANEENAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLRRRRDPADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGSADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGNIVKEEPTPLYPSLANYACNGPEGAVSPSAAAAAAVAAVAQGLRHQMCSMVAAAQSHPHDMVATNLSANFQAAVQVSQHHLNNNSGASNNNNSNNNRNSPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGIGGLGGLGGLGAISGMHYKPQRSFISPRPENIFQEDIADLVKSQHGHKDKDKVPVKLEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380983;
- 90% Identity
- iTF_00380983;
- 80% Identity
- iTF_00380983;