Mhyp002190.2
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- bab1
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010000002.1:5494191-5499299[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.7e-11 2.5e-08 33.2 0.0 2 35 38 72 37 78 0.91 2 3 2e-17 1.4e-14 53.2 0.0 1 43 186 229 186 231 0.95 3 3 4.1 2.8e+03 -2.2 1.4 6 15 304 313 302 316 0.88
Sequence Information
- Coding Sequence
- ATGGGtgatgaaaataaattttatccaaacacaaaaaaaaacctccCCACTATTGCATATATTCTAGCTGACTATTCGAGTCTACTGAAGCTGAAAGCACCAACGTGGACTCGTCATGATCTTCAGGAAGCAATTGAAGCAGTCGTCACCCAAAAAATGAGATTTACACAGGCATCGACCAAATATGGAATACCTAAAGGAACACTTTATGACAATATACTGGGAAAATCAAAGAGAATGATGGTATTGGAGGAAGCGGGACTTGATGTTACTGAAGAAAATGCTGTATTAGAATTTTGTTGTGACATAACTGTCAGTCCTTATAATAGACGTAcgaaaaaatcattgaatgcaatattaaattttgttgaaaaattacgTCGACAACGTGATCCAGGTTTTGCATTTTCTGGATTATCTGGATTTCGTTGGTGGTGGGCATTTTCAGACAGTTATCAGTATCAACTTCAATCTCTTTGGCAAAAATGTTGGAATACAAACTCCAGTTTGGTGCACAATTTGCGCTTTCGTGAACGTGGACCACTCAAATCATGGCGACCGGAAACGATGGCCGAAGCGATATTCAGTGTCTTGAAAGAAGGATTATCATTGAGTCAAGCAGCTAGgaaaTACGATATACCATATCCAACGTTTGTTCTTTATGCGAACCGAGTGCACAACATGCTTGGACCAAGCAGCGATGGAGGTGCTGatCTGAGACCGAAAGGCCGTGGTAGACCACAAAGGATTCTCCTTGGTGTTTGGCCAGACGAACATATTCGTGGTGTTATAAGGACTGTTGTGTTTCGCGATGGTGCTATCAAGGAAGAGCCAACACCAATATATCCGAATTTAGCGAATTATGCGTGCAACGGACCGGAGGAACCAGTGAGCCCTGGTGCTGCTGCGGCTGCTGCGGTTGCTGCGGTTGCCCAAGgaCTTAGACATCAAATGTGTAGTATGGTGGCGGCTGCTCAATCACACCAGCATGAAATGATCGCTACAAATCTATCAGCAAACTTCCAAGCAGCAGTGCAAGTCAGTCAACATCATTTAAACAACAATAGCAGCAcaagtaacaataataatagcagCAGAAATTCGCCATTGATGCTGGGATTGCCGAGTCCGGGCTCGGGTGGACCACCAGAGAGTCCAATAGAGGGTAGTCCACTCGCGAGTCCACTGGCACCATTAATGGATCCAGCTCACATACCAAGCAGTGTCGAACTTGGAATTGGTGTTGGTGGCATGACATATAAACCGCAACGCAGTTACGTCAGTCCACGAcccgaaaatatatttcaagatgACATTATTGATTTGGTGAAGAGTTCGCATACCGGTCACAAGGACAAGGAAAAAGTACCAGTGAAACTTGAACCGTTTGCTGATTCACGTAGTgagcaataa
- Protein Sequence
- MGDENKFYPNTKKNLPTIAYILADYSSLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLDVTEENAVLEFCCDITVSPYNRRTKKSLNAILNFVEKLRRQRDPGFAFSGLSGFRWWWAFSDSYQYQLQSLWQKCWNTNSSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRTVVFRDGAIKEEPTPIYPNLANYACNGPEEPVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHEMIATNLSANFQAAVQVSQHHLNNNSSTSNNNNSSRNSPLMLGLPSPGSGGPPESPIEGSPLASPLAPLMDPAHIPSSVELGIGVGGMTYKPQRSYVSPRPENIFQDDIIDLVKSSHTGHKDKEKVPVKLEPFADSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380983;
- 90% Identity
- -
- 80% Identity
- -