Acol008815.1
Basic Information
- Insect
- Aphidius colemani
- Gene Symbol
- bab1
- Assembly
- GCA_030523065.1
- Location
- JAPYYR010002673.1:6435-12886[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-09 3.2e-06 26.7 0.0 3 35 16 49 14 55 0.91 2 3 8.9e-18 1.5e-14 53.3 0.0 1 43 163 206 163 208 0.95 3 3 0.42 6.9e+02 -0.0 0.3 4 15 279 290 276 295 0.82
Sequence Information
- Coding Sequence
- GAATTATCGAGTGTCCTGAAAGTGAAAGCACCAACATGGTCACGTCATGATCTTCAAGAGGCAATTGAAGCTGTTGTCACACAAAAAATGCGTTTTACACAagcatcaacaaaatatagaATACCAAAAGGTACACTATATGACAACATACTTGGAAAATCAAAAAGGATGATGGTACTTGAAGAAGCTGcattaaatattcatgaagAAAATGCTGTATTAGAATTTTGTTGTGATATAACTGTTAGTCCATATAATAGAAGaactaaaaaatcattaaatgccgtattaaattttgttgaaaagttACGACGTAAAAGAGATCctggttttatatttaatggatTATCTGGATTTAGATGGTGGTGGGCATTTTCAGAAAGTTACCAGTATCAGCTTCAATCATTGTGGCAAAAATGTTGGAATACAAACTCTGGTCTTGTTCATAATCTTCGTTTTCGTGAACGTGGGCCATTAAAATCATGGAGACCTGAAACAATGGCTGAGGCAATATTTAGTGTATTAAAAGAAGGATTATCACTGAGTCAAGCAGcaagaaaATATGATATTCCATATCCAACATTTGTACTCTACGCAAATCGAGTACACAACATGCTCGGTCCAAGTGCAGACGGAGGAGCCGaCCTGAGACCAAAAGGACGAGGAAGACCACAAAGAATACTATTAGGTGTATGGCCAGATGAACATATTAGAGGTGTTATACGTGCTGTTGTATTTCGTGATGGAACAATTGTCAAAGAAGAAACAACACCAATATATCCAACACTTGGAAATTATGCTTGCAATCGACCTGATTCTGCGGTTAGTCCTGGTGCTGCTGCGGCTGCGGTTGCTGCGGTTGCACAAggTTTACGACATCAAATGTGTAGTATGGTTGCAGCAGCGCAAACTCATCAACACGATATGATTGCAACAAATTTATCAGCAAACTTCCAAGCAGCAATACAAGTTAATCaacatcatttaaataataatagtggtacaagcaataataataataatacaaatagtaATAATCGTAATTCACCGTTAATATTGGGATTACAAAGTCCTGGTTCAGTTGGTCCACCAGAGAGTCCGATGGAAGGTAGCCCATTGGCAAGTCCTTTGGCACCATTAATGGATCCAGCACATATACCAAATAGTGTTGATATTGGTATTGGTATGTCATATAAAACACAACGTAATTATATTAGTTCAAGAccagataatttatttcaagatgAAATTGCTGATTTAGTTGTTAAAACATcacatcataaaaatattgataaagatAAAGTACCAGTTAAAATTGAACCACTAAGTGATTCAAGAAGTGAGCAGTaa
- Protein Sequence
- ELSSVLKVKAPTWSRHDLQEAIEAVVTQKMRFTQASTKYRIPKGTLYDNILGKSKRMMVLEEAALNIHEENAVLEFCCDITVSPYNRRTKKSLNAVLNFVEKLRRKRDPGFIFNGLSGFRWWWAFSESYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGTIVKEETTPIYPTLGNYACNRPDSAVSPGAAAAAVAAVAQGLRHQMCSMVAAAQTHQHDMIATNLSANFQAAIQVNQHHLNNNSGTSNNNNNTNSNNRNSPLILGLQSPGSVGPPESPMEGSPLASPLAPLMDPAHIPNSVDIGIGMSYKTQRNYISSRPDNLFQDEIADLVVKTSHHKNIDKDKVPVKIEPLSDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380983;
- 90% Identity
- -
- 80% Identity
- -