Ccal041553.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- bab1
- Assembly
- GCA_963942595.1
- Location
- OZ012709.1:46496357-46502413[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-11 8.6e-08 33.2 0.0 2 35 21 55 20 61 0.91 2 3 1.7e-17 4.6e-14 53.3 0.0 1 43 163 206 163 208 0.95 3 3 3.5 9.5e+03 -2.1 1.4 6 15 282 291 280 294 0.88
Sequence Information
- Coding Sequence
- ATGACTCGATTTCTAGCCGACTATTCGACCCTGTTGAAGCTGAAGGCACCAACCTGGACGCGTCACGATCTCCAAGAGGCCATCGAAGCCGTGGTAACGCAAAAAATGCGTTTCACCCAAGCGTCGACCAAGTACGGCATCCCAAAAGGCACTCTCTACGACAATATACTCGGAAAATCCAAAAGGATGATGGTGCTGGAAGAAGCTGGTTTAAATTCCCACGAAGAAACGGCCGTTCTTCAATTTTGCTGCGACATCACAGTCAGTCCTTACAACAGACGAACGAAAAAGTCGCTCAACGCTATTCTTAATTTCGTGGAAAGACTGAGACGTCGCAGAGATCCGGGTTTCATTTTTACCGGCCTCTCGGGATTTCGTTGGTGCTACCAGTATCAACTTCAGTCACTCTGGCAAAAATGCTGGAACACGAACTCCGGACTGGTGCACAATCTTCGATTCCGGGAACGTGGACCCCTTAAATCATGGAGACCAGAGACGATGGCCGAAGCGATCTTCAGCGTTCTCAAGGAAGGACTTTCTCTGAGTCAGGCAGCTAGAAAATACGACATCCCCTATCCGACATTCGTGCTATACGCAAACCGAGTTCACAATATGCTTGGACCTAGCTCCGATGGTGGGGCCGATCTTCGACCGAAGGGTCGTGGCAGACCCCAGAGGATTCTTCTCGGCGTGTGGCCGGACGAGCACATCAGAGGTGTAATACGTGCGGTGGTTTTCCGCGATGGTCACATCGTCAAGGATGAGCAAAATCCGATGTATCCGAGCTTGGCGAATTATGCGTGCAACGGCCCGGAGGGTGCGGTTAGCCCTGGCGCAGCTGCGGCTGCTGCGGTCGCCGCGGTTGCTCAAGGTCTTCGACATCAGATGTGCAGTATGGTAGCGGCAGCGCAATCCCATCAGCACGACATGATAGCGACGAATCTATCCGCAAATTTCCAGGCTGCCGTGCAGGTTAATCAGCATCATTTGAACAACAACAGTCCAGGgagcaacaacaataacaacaataacagcAACAATAGGAATTCGCCCCTGATACTCGGGCTACCGAGTCCCGGATCCGGCGGTCCACCGGAGAGTCCTATGGAGGGTAGTCCATTGGCGAGCCCCCTGGCACCGCTTATGGATCCTGCTCACATACCGAGCAGCGTCGAGGTCGGTATCGGCGTCAGCGGAATGACCTACAAGCCAACGCGCAGCTTCGTAAGTCCACGGCCGGAGAATTTCTTCCAAGACGACATTGCCGATCTCGTTAAGAGTTCTCACGGTCACAAAGACAAGGACAAGGTCCCCGTGAAACTCGAGCCACTATCGGATTCCCGAAGCGAACAGTAA
- Protein Sequence
- MTRFLADYSTLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLNSHEETAVLQFCCDITVSPYNRRTKKSLNAILNFVERLRRRRDPGFIFTGLSGFRWCYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHIVKDEQNPMYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVNQHHLNNNSPGSNNNNNNNSNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPTRSFVSPRPENFFQDDIADLVKSSHGHKDKDKVPVKLEPLSDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380983;
- 90% Identity
- iTF_01497315;
- 80% Identity
- -