Basic Information

Insect: Argynnis bischoffii
Gene Symbol: -
Assembly: GCA_033884665.1
Location: CM066617.1:1208083-1212912[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.061 5.2 8.4 1.1 1 21 78 98 78 99 0.96

2 31 1.5 1.3e+02 4.0 0.1 3 23 128 148 127 148 0.95

3 31 0.0054 0.46 11.7 0.3 2 23 171 192 170 192 0.97

4 31 0.022 1.8 9.8 0.1 1 23 196 218 196 218 0.95

5 31 0.61 51 5.3 0.8 1 15 223 237 223 246 0.78

6 31 0.062 5.2 8.4 0.2 1 23 252 275 252 275 0.94

7 31 0.0025 0.21 12.7 1.2 1 23 282 305 282 305 0.98

8 31 0.00024 0.02 16.0 0.7 1 23 312 334 312 334 0.97

9 31 3.9e-06 0.00033 21.6 2.3 1 23 340 362 340 362 0.97

10 31 0.00011 0.0092 17.0 0.2 2 23 366 388 365 388 0.96

11 31 7.7e-05 0.0065 17.5 0.4 1 23 465 488 465 488 0.98

12 31 0.5 42 5.5 0.4 2 23 515 537 514 537 0.95

13 31 0.016 1.4 10.2 2.8 1 23 559 581 559 581 0.98

14 31 0.00012 0.01 16.9 0.5 1 23 585 607 585 607 0.98

15 31 0.00078 0.066 14.4 0.2 1 21 641 661 641 664 0.90

16 31 8 6.7e+02 1.7 2.0 1 13 671 683 671 684 0.89

17 31 1.6 1.4e+02 3.9 1.1 1 19 731 749 731 753 0.89

18 31 0.079 6.6 8.1 0.3 2 22 778 798 777 800 0.89

19 31 0.0012 0.1 13.8 0.7 1 23 822 844 822 844 0.99

20 31 0.0001 0.0085 17.2 1.1 1 23 848 870 848 870 0.98

21 31 0.26 22 6.4 1.1 1 23 904 927 904 927 0.92

22 31 0.0033 0.28 12.4 1.2 1 23 971 993 971 993 0.96

23 31 7.6 6.4e+02 1.8 0.3 2 23 1017 1039 1016 1039 0.86

24 31 1.2 98 4.4 3.0 3 23 1063 1083 1062 1083 0.97

25 31 0.001 0.086 14.0 2.3 3 23 1089 1109 1088 1109 0.97

26 31 0.0086 0.73 11.1 2.7 1 23 1116 1139 1116 1139 0.97

27 31 0.00018 0.016 16.3 2.9 1 23 1145 1168 1145 1168 0.97

28 31 0.0023 0.19 12.9 0.7 1 23 1174 1197 1174 1197 0.97

29 31 0.00048 0.041 15.0 0.5 1 23 1203 1225 1203 1225 0.97

30 31 3.3e-06 0.00028 21.8 0.8 1 23 1231 1253 1231 1253 0.99

31 31 9.2e-05 0.0077 17.3 4.8 1 23 1259 1281 1259 1282 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.061	5.2	8.4	1.1	1	21	78	98	78	99	0.96
2	31	1.5	1.3e+02	4.0	0.1	3	23	128	148	127	148	0.95
3	31	0.0054	0.46	11.7	0.3	2	23	171	192	170	192	0.97
4	31	0.022	1.8	9.8	0.1	1	23	196	218	196	218	0.95
5	31	0.61	51	5.3	0.8	1	15	223	237	223	246	0.78
6	31	0.062	5.2	8.4	0.2	1	23	252	275	252	275	0.94
7	31	0.0025	0.21	12.7	1.2	1	23	282	305	282	305	0.98
8	31	0.00024	0.02	16.0	0.7	1	23	312	334	312	334	0.97
9	31	3.9e-06	0.00033	21.6	2.3	1	23	340	362	340	362	0.97
10	31	0.00011	0.0092	17.0	0.2	2	23	366	388	365	388	0.96
11	31	7.7e-05	0.0065	17.5	0.4	1	23	465	488	465	488	0.98
12	31	0.5	42	5.5	0.4	2	23	515	537	514	537	0.95
13	31	0.016	1.4	10.2	2.8	1	23	559	581	559	581	0.98
14	31	0.00012	0.01	16.9	0.5	1	23	585	607	585	607	0.98
15	31	0.00078	0.066	14.4	0.2	1	21	641	661	641	664	0.90
16	31	8	6.7e+02	1.7	2.0	1	13	671	683	671	684	0.89
17	31	1.6	1.4e+02	3.9	1.1	1	19	731	749	731	753	0.89
18	31	0.079	6.6	8.1	0.3	2	22	778	798	777	800	0.89
19	31	0.0012	0.1	13.8	0.7	1	23	822	844	822	844	0.99
20	31	0.0001	0.0085	17.2	1.1	1	23	848	870	848	870	0.98
21	31	0.26	22	6.4	1.1	1	23	904	927	904	927	0.92
22	31	0.0033	0.28	12.4	1.2	1	23	971	993	971	993	0.96
23	31	7.6	6.4e+02	1.8	0.3	2	23	1017	1039	1016	1039	0.86
24	31	1.2	98	4.4	3.0	3	23	1063	1083	1062	1083	0.97
25	31	0.001	0.086	14.0	2.3	3	23	1089	1109	1088	1109	0.97
26	31	0.0086	0.73	11.1	2.7	1	23	1116	1139	1116	1139	0.97
27	31	0.00018	0.016	16.3	2.9	1	23	1145	1168	1145	1168	0.97
28	31	0.0023	0.19	12.9	0.7	1	23	1174	1197	1174	1197	0.97
29	31	0.00048	0.041	15.0	0.5	1	23	1203	1225	1203	1225	0.97
30	31	3.3e-06	0.00028	21.8	0.8	1	23	1231	1253	1231	1253	0.99
31	31	9.2e-05	0.0077	17.3	4.8	1	23	1259	1281	1259	1282	0.96

Sequence Information

Coding Sequence: ATGGACGGTGGAAGAACTGACTCAAGTTTTCTGTTTTTAGGAGAACGCGGTCAGACAGAAAACGACAATGATAAGTCGACTGAAAGTTTATTGTTAGGTAATTCGAAAGTGACTGAAAAACGAGGTTATCAACGAAGTGCCAGAGCTGAAGCCAGATTTATGACAAAGAAGAATGCCAGTGCTATACTTGAATGTTGGTCTTTATGTCCATTTAGATGGAAAAGGAATAGATTCAAATGCGCTTACTGCGAAGATAATTTCACTGAATGCTCAGAACTTCGATCTCACGTTAGACTTTGCTCGACCCAACACAGCGTTAaagatatttatagtaaattcaAAGAAATGTCACTCATAAACGTTGATATCACTGAAGCCATATGCAGAATTTGCGCCATGCCGTTTCAAGATATAACAGATATGAAGCGCCACGTAATAAACCATGGTTATGACGTAGACTCCTCCTATCCGGATGGTGTTCTACCATTTTGTTTGGACAAAGAGTCGTGGAGGTGTGTAATTTGTCAAGAATCGTTCAATAACTTCCTCAAACTGTATGAACACATGAATATACATTACCAGCACTATATTTGTGCGACTTGCGGAAAAGGGTACATGACAGCGCCTCGATTACGTAAACATTCTGAAGTACATATAACGGGCACTTTTCCATGTAATAAGTGTAGGCGAGTATTCACTATGCGTGCAGCCAGAGATTACCATAAAGCCCACGCCCACGCAAAAGGACCTCGTTACGAATGTCCACAATGTAATATGAGATTTGGAGGCTATTATGAAAGGATGAATCATTTGAATGAAGCTCATAGAGAAAAGGAGGTTTCTTATAAATGTGCTCATTGTGAATTATCTTTTAAAACTAGTGGAAAGCGGGCAATCCATGTACGGTCGATACATTTTCCTCAACAACGCAATTTTCCTTGCCCTTTTTGTAAATGGTTGTTTAAAACTGGCTACGAATTAAAAAGGCACATGGTGAAACATACGGGTGAAAGAAATTTTTGTTGTGCGGTATGTGGAAAGACCTTCCCAAGGAATAGAGCACTGAAAACTCATCTCAAAACTCATGAAGATCTCAGTTGTAATTGGTGCGgcgttatttttaaacaaaaagccCTACTAGTGACACATTTACGCTCAAATCATCCGGAGATAAgtTCCGCTATTGCGGACTCTGAAGATGTAGTGGTAGTAAGACGCGTTAGAAAGCTAAAAGAGAACGTTTGCGCGCGGCAGATGCGTCGGCGGCGGCGTGCCAACAACGAGCTCCCAGAGGAATCTGAGAAGCGAATATCAAAAACTATGATGCGTCGAAATGCTATGACGCTTCTAGAATATTCTACAGCTTGGGCTTTTCGATGGTTCCAAAGCGCTTTCTATTGTTCCTATTGTGATGTTAAATTTGTTGACCCAATACTCTTGAGAGATCACGTTCGGACGTTTCATATTACTGAAGTACCTACAAGACGTATATTCTCAAAACTCACTGAAAATAACATGGTTAAAATAGATGTTTCCGACTTACGCTGTAGATTGTGTAATTATCAACTTAGTAGCGTGGAATTAATGAAGAAACATCTAATATCTGGGCacgaaaaatttttttacttaaactatAATGATGGTGTTCTGCCATTCATACTAGAacctaataaatttaattgtcaAATGTGTAATGCAGTGTTCTCTAGTTTTTGCAAAATCAACGAACACATGAACACTCATTATAAAAACTACGTTTGCGATGCATGTGGGAAAGCATTTATATCAAAATCAAGATTCAGAACTCACGTACAGTCACATGAAGTCGGTAGTTTTCCTTGTGGGGAGTGTGAGGAGGTATTAGAAACTAGGGCTGCTAGAATGTGCCACAGATTAAGGATACATAAAAAAGGCATTCGATATACATGTCCATATTGCCCTGAAGTATTTACAACTTATTATGCCAGAGCTAAACATTTAGTAGATGGACATGATCAGCAAAAAAGAGATTATGAGTGTTCATCTTGCGGGAAATTGTTTGAGACAAGTTgcCCAGAAGAGCTGATAACAACAAAAAGTTCAATAAGGATTGAGTGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCGAATTCTGCCCTAATACTAGATTGCTCCAACGCTATAGTATTTCGTTGGTCGCGTGGAAAATTTCTTTGCGCTTATTGCCCAGAAACGTTTCAAAATGTGAAGGAAATCCGCAAACATTGTGGTATACATGACAAACTTACAGTCCTACAGAAACCTGAAGTCCGTAATTCCTTTCCTCTTAAAATCGACATCACAGATCTAAAATGCAAGCTGTGTGATAACAATTTGAAGAATTTGACGGATCTCAAAAACCATTTGGTTGGGGCGCACGATAAAAAATTTGACGCAAATTATGATGATGGTGTTATTCCTTTCGTATTAACCGGTTCAGAGTATAGATGTGTGATTTGCGATAATTTATTCGAAAGTTACGTGAACTTGTTCAGTCACATGAATAAGCATTACCAAAGTTTTGTTTGCTACACATGTGGTAAAGGATACTCTGCTAAATATAAGCTTCGAGCACACCAGAAAAGTCACGAAACTGGCAAAGTGCCATGTTCAAGGTGTGACATGGTGTTTTTAAACCATGTCGTTAAAAATCGACATGTTGCCACTGTTCATGGTTCGAAAAAACGTTATCGCTGCCCAATTTGCGCCATGGCATTCGAGTCTTGTCATTCTAGACTGATTCACCTTGGTAAAATACATGGACAGAAAAGAACGGTCAAGACATTTATGTGGAAAAGGAGACGAAGGCTTTATAATGACCAAAGAGATAACGCGGCGACTCTAATAGAATTTTCAAACGTTTGTCCTTTTCGCTGGAAACGTGGAGCATTTGCGTGTTCCCATTGTCCAAGAACATTCGGCAATTTTAAAGATGTTAGCGATCATATGCAGGAACATCCCAATCGCCTCGAGGCAATGCGATACGCGCGACCCTACGATAATTTAAAGATAGAAATAAGTAATCTTCGATGTGAAATCTGCCAGGAAAATATGAATGGCATAGAACATCTTAAAGACCACTTATTTGAAGTTCACCAAAAAGCAATCGTGAAAGATATAGGACTTGGCGTAACTCCATTTATTTTAAGGGACAAGGAAATGCTTTGCACTCATTGCGACGAACGATTCTTATTGTTTTCGAGACTCAACAGCCACATGAACCAGCATTACCCTAATAATATTTGCTCCCATTGTGGTAAATCTTTCTCTGCTGTCCACCGCCTAAAAGCTCATCAGTTGATCCACGAATCAAACGATCAAGAACATAAATGCACTAAATGCGACGAAATATTCGAGACGAGAGCATTAAAAAATTATCACATAAACACAAAACATGCTGTAGAAAATCGATACAGATGTCCATACTGTAAAATATCCTTCAAACGTTATTCCGACAGAGTGCGACATCTGAAACAATTCCACAATCAGATCGTTGAATATCCTTGCCATTTGTGCACTGCGGTTTTTGCAATGTCCGATCAAAGAACAAAGCATATAAGAAACGTTCATATTAAACATAAACAGTTCCAATGCGACTTCTGCCCAAGCAAGTTCGTCACAGCTGGACAGTTAAAGAATCATTTGGTGAAGCACAGTGGCCTAAAGGAGTACCAATGTGACGTGTGTAAGAAGAACTACGCGAGGGCTCGAACGTTAAAAGAACATATGAGAATACACAATAATGATAGACGATTTGTCTGCGAATATTGCAATAATGCGTTCATTCAAAAGTGCAGTCTCAAAAGTCATATCCGAACACATCATCCAAACGCggaatctgtgaaaatttcgatataa
Protein Sequence: MDGGRTDSSFLFLGERGQTENDNDKSTESLLLGNSKVTEKRGYQRSARAEARFMTKKNASAILECWSLCPFRWKRNRFKCAYCEDNFTECSELRSHVRLCSTQHSVKDIYSKFKEMSLINVDITEAICRICAMPFQDITDMKRHVINHGYDVDSSYPDGVLPFCLDKESWRCVICQESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCNKCRRVFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSIHFPQQRNFPCPFCKWLFKTGYELKRHMVKHTGERNFCCAVCGKTFPRNRALKTHLKTHEDLSCNWCGVIFKQKALLVTHLRSNHPEISSAIADSEDVVVVRRVRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFYCSYCDVKFVDPILLRDHVRTFHITEVPTRRIFSKLTENNMVKIDVSDLRCRLCNYQLSSVELMKKHLISGHEKFFYLNYNDGVLPFILEPNKFNCQMCNAVFSSFCKINEHMNTHYKNYVCDACGKAFISKSRFRTHVQSHEVGSFPCGECEEVLETRAARMCHRLRIHKKGIRYTCPYCPEVFTTYYARAKHLVDGHDQQKRDYECSSCGKLFETSCPEELITTKSSIRIEWRKKRPFLENKANSALILDCSNAIVFRWSRGKFLCAYCPETFQNVKEIRKHCGIHDKLTVLQKPEVRNSFPLKIDITDLKCKLCDNNLKNLTDLKNHLVGAHDKKFDANYDDGVIPFVLTGSEYRCVICDNLFESYVNLFSHMNKHYQSFVCYTCGKGYSAKYKLRAHQKSHETGKVPCSRCDMVFLNHVVKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKIHGQKRTVKTFMWKRRRRLYNDQRDNAATLIEFSNVCPFRWKRGAFACSHCPRTFGNFKDVSDHMQEHPNRLEAMRYARPYDNLKIEISNLRCEICQENMNGIEHLKDHLFEVHQKAIVKDIGLGVTPFILRDKEMLCTHCDERFLLFSRLNSHMNQHYPNNICSHCGKSFSAVHRLKAHQLIHESNDQEHKCTKCDEIFETRALKNYHINTKHAVENRYRCPYCKISFKRYSDRVRHLKQFHNQIVEYPCHLCTAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKNHLVKHSGLKEYQCDVCKKNYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPNAESVKISI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00248310; iTF_00723337; iTF_00247405; iTF_00212786; iTF_00775429; iTF_00781191; iTF_00781997; iTF_00782806; iTF_00776858; iTF_01182044; iTF_00780415; iTF_00457392; iTF_00621393; iTF_00778169; iTF_00458234;
90% Identity: iTF_00248310;
80% Identity: -