Basic Information

Insect: Heliconius cydno
Gene Symbol: -
Assembly: GCA_036379175.1
Location: FAPN01002256.1:5606-10406[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.084 11 7.7 0.7 1 21 78 98 78 99 0.95

2 30 0.004 0.51 11.9 1.1 2 23 171 192 170 192 0.97

3 30 0.019 2.4 9.8 0.1 1 23 196 218 196 218 0.95

4 30 2 2.6e+02 3.4 0.7 1 15 223 237 223 246 0.78

5 30 0.053 6.9 8.4 0.2 1 23 252 275 252 275 0.94

6 30 0.0022 0.28 12.7 1.2 1 23 282 305 282 305 0.98

7 30 0.00035 0.045 15.2 0.7 1 23 312 334 312 334 0.97

8 30 3.6e-06 0.00046 21.5 3.0 1 23 340 362 340 362 0.98

9 30 0.00011 0.014 16.9 0.6 2 23 366 388 365 388 0.96

10 30 0.00058 0.075 14.5 0.3 1 23 466 489 466 489 0.97

11 30 2.2 2.8e+02 3.3 0.2 2 23 516 538 515 538 0.92

12 30 0.0015 0.19 13.2 1.3 1 23 560 582 560 582 0.98

13 30 0.00019 0.025 16.1 0.5 1 23 586 608 586 608 0.97

14 30 0.00046 0.059 14.9 0.2 1 23 642 665 642 665 0.92

15 30 6 7.7e+02 1.9 2.0 1 13 672 684 672 686 0.89

16 30 3 3.9e+02 2.9 0.4 1 19 732 750 732 754 0.87

17 30 1.4 1.7e+02 4.0 0.5 2 21 779 798 778 801 0.84

18 30 0.0075 0.96 11.1 1.6 1 23 823 845 823 845 0.98

19 30 8.7e-05 0.011 17.1 1.1 1 23 849 871 849 871 0.98

20 30 0.23 29 6.4 1.1 1 23 905 928 905 928 0.92

21 30 0.0017 0.22 13.1 1.5 1 23 976 998 976 998 0.97

22 30 0.089 11 7.7 0.4 2 23 1022 1044 1021 1044 0.93

23 30 0.99 1.3e+02 4.4 3.0 3 23 1068 1088 1067 1088 0.97

24 30 3.7e-05 0.0047 18.3 1.4 3 23 1094 1114 1093 1114 0.97

25 30 0.23 30 6.4 2.9 1 23 1121 1144 1121 1144 0.97

26 30 0.00033 0.043 15.3 2.8 1 23 1150 1173 1150 1173 0.97

27 30 0.0019 0.25 12.9 0.7 1 23 1179 1202 1179 1202 0.97

28 30 0.0006 0.077 14.5 0.5 1 23 1208 1230 1208 1230 0.97

29 30 5.9e-07 7.6e-05 24.0 1.0 1 23 1236 1258 1236 1258 0.99

30 30 7.9e-05 0.01 17.3 4.8 1 23 1264 1286 1264 1287 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.084	11	7.7	0.7	1	21	78	98	78	99	0.95
2	30	0.004	0.51	11.9	1.1	2	23	171	192	170	192	0.97
3	30	0.019	2.4	9.8	0.1	1	23	196	218	196	218	0.95
4	30	2	2.6e+02	3.4	0.7	1	15	223	237	223	246	0.78
5	30	0.053	6.9	8.4	0.2	1	23	252	275	252	275	0.94
6	30	0.0022	0.28	12.7	1.2	1	23	282	305	282	305	0.98
7	30	0.00035	0.045	15.2	0.7	1	23	312	334	312	334	0.97
8	30	3.6e-06	0.00046	21.5	3.0	1	23	340	362	340	362	0.98
9	30	0.00011	0.014	16.9	0.6	2	23	366	388	365	388	0.96
10	30	0.00058	0.075	14.5	0.3	1	23	466	489	466	489	0.97
11	30	2.2	2.8e+02	3.3	0.2	2	23	516	538	515	538	0.92
12	30	0.0015	0.19	13.2	1.3	1	23	560	582	560	582	0.98
13	30	0.00019	0.025	16.1	0.5	1	23	586	608	586	608	0.97
14	30	0.00046	0.059	14.9	0.2	1	23	642	665	642	665	0.92
15	30	6	7.7e+02	1.9	2.0	1	13	672	684	672	686	0.89
16	30	3	3.9e+02	2.9	0.4	1	19	732	750	732	754	0.87
17	30	1.4	1.7e+02	4.0	0.5	2	21	779	798	778	801	0.84
18	30	0.0075	0.96	11.1	1.6	1	23	823	845	823	845	0.98
19	30	8.7e-05	0.011	17.1	1.1	1	23	849	871	849	871	0.98
20	30	0.23	29	6.4	1.1	1	23	905	928	905	928	0.92
21	30	0.0017	0.22	13.1	1.5	1	23	976	998	976	998	0.97
22	30	0.089	11	7.7	0.4	2	23	1022	1044	1021	1044	0.93
23	30	0.99	1.3e+02	4.4	3.0	3	23	1068	1088	1067	1088	0.97
24	30	3.7e-05	0.0047	18.3	1.4	3	23	1094	1114	1093	1114	0.97
25	30	0.23	30	6.4	2.9	1	23	1121	1144	1121	1144	0.97
26	30	0.00033	0.043	15.3	2.8	1	23	1150	1173	1150	1173	0.97
27	30	0.0019	0.25	12.9	0.7	1	23	1179	1202	1179	1202	0.97
28	30	0.0006	0.077	14.5	0.5	1	23	1208	1230	1208	1230	0.97
29	30	5.9e-07	7.6e-05	24.0	1.0	1	23	1236	1258	1236	1258	0.99
30	30	7.9e-05	0.01	17.3	4.8	1	23	1264	1286	1264	1287	0.96

Sequence Information

Coding Sequence: ATGGACAGTGGAAGAACTGACTCaggttttctatttttaggaGAACGCGGTCAAACAGAAAACAGAAACGATAAAACATCCGAAAGTTTACTATCTAGTGATACGAAAGTTATTGAAAAACGACGGTATCAGCGAAGTGCGAGAGCTGAAGCaagatttataacaaaaaagaacgCCACAGCCTTGCTTGAGTGTTGGTCGTTATGTCCGTTTAGGTGGAAAAGAAACAGATTTAAATGTGCGTATTGTGAAGATAACTTCACTGAATGTTCAGAGCTGAGAGAACATGTTAAAATATGCTCGATACAACACAGTGTCaaagatatttatagtaaattcaaAGAAATGTCACTGATAAACGTCGATATTACTGAGGCCACCTGTAGAATTTGTGCCATGCCATTTCAAGGTATTCTTGAAATGCGAAATCACGTCATTGATCACGGGTATGATGTAGATACCACATATCCTGATGGCGTTCTGCCGTTTTGTTTGAACAAGGAATCTTGGAGATGTGTAATATGTCATGAatcttttaacaattttctcAAATTGTACGAACATATGAACATACATTATCAGCATTACATATGCGCTACCTGTGGTAAAGGATACATGACGGCGCCGAGATTGCGCAAACATTCTGAAGTACATATAACTGGGACTTTTCCATGTGACAAGTGTCGGCGAATTTTCACCATGCGTGCAGCTAGAGATTATCATAAAGCTCATGCTCATGCTAAGGGACCTCGTTACGAATGTCCACAATGTAATATGAGATTTGGAGGCTATTACGAAAGGATGAATCATTTGAATGAGGCTCATAGAGAAAAGGAAGTTTCTTACAAGTGTGCTCATTgtgaattatcttttaaaactaGCGGAAAACGTGCAATTCATGTTAGATCCGTTCATTTTCCACAGCAACGCAACTTTGCTTGTCCTTTTTGTAAATGGCTATTTAAAACAGGCTATGAATTAAAAAGACATATGGTGAGACATACGGGAGAAAGAAATTTCTGTTGTACTATATGCGGAAAAACGTTTCCAAGAAATAGAGCGTTAAGAGCTCATTTCAAAACGCATGAAGACCTTAGTTGTAAATGGTGTGGAGTgattttcaaacaaaagacACTTTTATTGACTCATCTGCGATCCAATCATCCGGAAATAAgttccgCTATTGCGGATTATGAAGACTTAGTAGTAGGAGTTAAACgcattagaaaattaaaggaaaacgTCTGTGCGAGGCAAATGCGTCGTCGACGGCGCGCCAATAACGAGCTACCAGAAGAATCTGAGAAAAGAATATCTAAAACAATGATGCGTAGAAATGCCATGACGCTTCTCGAATATTCAACCGCTTGGGCCTTCCGTTGGTTTCAAAGCGCTTTTTTTTGTTCCTATTGTGACGCTAAATACGTTGATCCAGTACTTTTACGTAACCATGTTCAGACTTTTCACATTGCCGATGCTCCAACGAAACGAATATTCTCAAAACTCACGGAAAACAATAtggttaaaattgatattttaagctTGCGGTGTAGGCTGTGTGATTTTGAAATAAGTAGTTtggaattaatgaaaaatcatTTAGTTTCTGgacatgataaaatatttcacttaaacTATAACGATGGTGTTTTACCATTCATTCTTGAACCTAATAGATTTGAATGCCAAATATGTGATGCGGCATTCTCgagtttttgtaaaattaacgAACATATGAACactcattataaaaattacatttgcgATGCATGTGGTAAAGCGTTTATTTCCAAATCAAGGTTTAGAACTCACGTCCAATCCCATGAGATTGGTAATTTTCCTTGCGGAGAGTGTGAGGAGATTTTGGAAACAAGAGCTGCCAGAATGTGCCATAGATTAAGAATACACAAAAAGGGAGTACGGTACACATGTCCATATTGCCCAGAAGTATTTACAACTTATTACGCAAGAGCCAAACATTTAGTGAATGGACATAatcaacaaaagaaaaattatgagTGTTCATCTTgtggaaaattatttgaaactaGTTgcACAGAAGCCATCAGAACAACAAAAAGTTCAATAGCGATTGAATGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCTAATTCGGCCGTAATACTAGATTGCTCAAATGCTATAGTATTTCGATGGTCACGTGGCAAATTTCTTTGTGCCTACTGTCCAGAAATATTCCAAAACGTAGCAGATATCCGCAAGCACTGCGATATACATGAAAAGCTTACAGTACTTCAGAAACCAGAAGTACACAATTCATTTCCACtgaaaatagatataacaGATTTAAAGTGCATCCTgtgtaataatagttttaaaaaattaacggATTTCAAAATTCATTTAGTTGATGTTCACAGTAAAGTATTTGACTCAAATTACGACGACGGTGTTATTCCGTTCATACTTACGGGCTCAGAGTACAGATGTGTCATTTGTCACAACTTGTTTGAAAGCTACGTGAATTTATTCAGTCATATGAATGAGCATTATCAAAGTTTTGTATGCTACACGTGCGGTAAAGGATACTCGGCCAAATATAAACTGCGAGCACATCAGAAAAGTCACGAGACCGGTAAAGTGCCATGTTCCAGATGTGACTTAGTGTTTTTAAATCATGTTATAAAAAACCGACACGTAGCTACAGTGCATGGATCCAAGAAAAGATATCGTTGTCCAATTTGCGCTATGGCTTTCGAATCTTGCCATTCGAGATTGATACATCTTGGGAAAGTACATGGACAAAAAAGCGAATATCGGTggACATTCGCGACGTTTATATGGAAACGTGGACGAAGGCTTTACAATGATCACAGAGATAACGCCGCGACTATTATACAATTCTCAAATGTTTGTCCTTTTCGCTGGAAACGCGGAGCTTTCGCTTGCTCTCATTGTCCGAGAACTTTTGGCAACTTTAAAGATGTTAGCAATCATATGCAGGAGCATCCAAATCGCCTTGAGGCAATGCGGTATGCTCGCCCTTATGATAATGTAAAGGTAGAAATAAGTAACCTTcaatgtaaaatttgtaatgaaaatatgactGGCTTAGACCATCTTAAGGACCATTTATTGGAAGTTCATCAAAAATCAATAACCAAAGACCTTAGTCTTGGTGTAACCCCTTTTATTCTAAAAGACAAAGAAATGCTTTGTACTCATTGTGATGAACGTTTTCTCTTGTTTTCGAGACTGAACAGTCACATGAATCAACACTATCCAAATAATATCTGTCCTCACTGCGGTAAATCTTTCTCTGCTGCTCATCGCCTTAAGGCCCACCAGCTAATACATGAAACTAATAACCAAGAGCATAAATGTGCCAAATGTGGTGATATATTCGAGACACGAacgttaaaaaattatcacaTGAACACTAAACATGCAACAGAAAATCGATACAGATGTCCCTATTGTAGAATATCGTTTAAACGTTACTCAGATAGAGTTCGTCACCTGAAGCAGTTCCACAATCAAAGCGTGGAATATCCATGTCATTTATGTACAGCAGTTTTCGCTATGTCCGACCAAAGAACCAAACATATAAGAAACGttcatattaaacataaacaatttcaatgtGATTTCTGTCCAAGCAAGTTTGTTACTGCCGGTCAGTTGAAGAGTCATTTAGTGAAGCACAGTGGTGTCAAGGAATACCAATGCAACGTGTGCAAGAAGAGTTACGCGAGAGCTAGAACTTTAAAAGAACATATGAGAATACACAATAATGATAGAAGATTCGTTTGCGAATACTGTAATAATGCGTTCATACAAAAGTGTAGTCTTAAAAGTCATATTCGAACACACCACCCGAGCGCGGAACTAGTGAAAATttctgtataa
Protein Sequence: MDSGRTDSGFLFLGERGQTENRNDKTSESLLSSDTKVIEKRRYQRSARAEARFITKKNATALLECWSLCPFRWKRNRFKCAYCEDNFTECSELREHVKICSIQHSVKDIYSKFKEMSLINVDITEATCRICAMPFQGILEMRNHVIDHGYDVDTTYPDGVLPFCLNKESWRCVICHESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCRRIFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSVHFPQQRNFACPFCKWLFKTGYELKRHMVRHTGERNFCCTICGKTFPRNRALRAHFKTHEDLSCKWCGVIFKQKTLLLTHLRSNHPEISSAIADYEDLVVGVKRIRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFFCSYCDAKYVDPVLLRNHVQTFHIADAPTKRIFSKLTENNMVKIDILSLRCRLCDFEISSLELMKNHLVSGHDKIFHLNYNDGVLPFILEPNRFECQICDAAFSSFCKINEHMNTHYKNYICDACGKAFISKSRFRTHVQSHEIGNFPCGECEEILETRAARMCHRLRIHKKGVRYTCPYCPEVFTTYYARAKHLVNGHNQQKKNYECSSCGKLFETSCTEAIRTTKSSIAIEWRKKRPFLENKANSAVILDCSNAIVFRWSRGKFLCAYCPEIFQNVADIRKHCDIHEKLTVLQKPEVHNSFPLKIDITDLKCILCNNSFKKLTDFKIHLVDVHSKVFDSNYDDGVIPFILTGSEYRCVICHNLFESYVNLFSHMNEHYQSFVCYTCGKGYSAKYKLRAHQKSHETGKVPCSRCDLVFLNHVIKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKVHGQKSEYRWTFATFIWKRGRRLYNDHRDNAATIIQFSNVCPFRWKRGAFACSHCPRTFGNFKDVSNHMQEHPNRLEAMRYARPYDNVKVEISNLQCKICNENMTGLDHLKDHLLEVHQKSITKDLSLGVTPFILKDKEMLCTHCDERFLLFSRLNSHMNQHYPNNICPHCGKSFSAAHRLKAHQLIHETNNQEHKCAKCGDIFETRTLKNYHMNTKHATENRYRCPYCRISFKRYSDRVRHLKQFHNQSVEYPCHLCTAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKSHLVKHSGVKEYQCNVCKKSYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPSAELVKISV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00160039;
90% Identity: iTF_00775429;
80% Identity: -