Basic Information

Insect: Heliconius hermathena
Gene Symbol: -
Assembly: GCA_013403705.1
Location: JAAIXJ010000229.1:241582-246381[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.081 5.7 7.8 0.7 1 21 79 99 79 100 0.95

2 29 0.013 0.93 10.3 0.3 2 23 172 193 171 193 0.97

3 29 0.018 1.3 9.8 0.1 1 23 197 219 197 219 0.95

4 29 2 1.4e+02 3.4 0.7 1 15 224 238 224 247 0.78

5 29 0.051 3.6 8.4 0.2 1 23 253 276 253 276 0.94

6 29 0.0021 0.15 12.8 1.2 1 23 283 306 283 306 0.98

7 29 0.00034 0.024 15.3 0.7 1 23 313 335 313 335 0.97

8 29 3.5e-06 0.00024 21.5 3.0 1 23 341 363 341 363 0.98

9 29 0.00056 0.039 14.6 0.3 1 23 442 465 442 465 0.97

10 29 0.95 67 4.4 0.2 2 23 492 514 491 514 0.94

11 29 0.0035 0.25 12.1 1.7 1 23 536 558 536 558 0.98

12 29 2.9e-05 0.002 18.6 0.9 1 23 562 584 562 584 0.98

13 29 0.00064 0.045 14.4 0.2 1 21 618 638 618 641 0.90

14 29 5.8 4.1e+02 1.9 2.0 1 13 648 660 648 662 0.89

15 29 3.2 2.3e+02 2.7 0.4 1 19 708 726 708 730 0.86

16 29 0.014 0.97 10.2 1.0 2 23 755 777 754 777 0.91

17 29 0.0072 0.51 11.1 1.6 1 23 799 821 799 821 0.98

18 29 8.4e-05 0.0059 17.2 1.1 1 23 825 847 825 847 0.98

19 29 0.22 15 6.4 1.1 1 23 881 904 881 904 0.92

20 29 0.0016 0.11 13.1 1.5 1 23 952 974 952 974 0.97

21 29 2.6 1.9e+02 3.0 0.2 2 23 998 1020 997 1020 0.89

22 29 0.96 67 4.4 3.0 3 23 1044 1064 1043 1064 0.97

23 29 3.5e-05 0.0025 18.4 1.4 3 23 1070 1090 1069 1090 0.97

24 29 0.052 3.6 8.4 2.8 1 23 1097 1120 1097 1120 0.98

25 29 0.00032 0.023 15.3 2.8 1 23 1126 1149 1126 1149 0.97

26 29 0.0019 0.13 12.9 0.7 1 23 1155 1178 1155 1178 0.97

27 29 0.00058 0.041 14.5 0.5 1 23 1184 1206 1184 1206 0.97

28 29 5.7e-07 4e-05 24.0 1.0 1 23 1212 1234 1212 1234 0.99

29 29 7.6e-05 0.0054 17.3 4.8 1 23 1240 1262 1240 1263 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.081	5.7	7.8	0.7	1	21	79	99	79	100	0.95
2	29	0.013	0.93	10.3	0.3	2	23	172	193	171	193	0.97
3	29	0.018	1.3	9.8	0.1	1	23	197	219	197	219	0.95
4	29	2	1.4e+02	3.4	0.7	1	15	224	238	224	247	0.78
5	29	0.051	3.6	8.4	0.2	1	23	253	276	253	276	0.94
6	29	0.0021	0.15	12.8	1.2	1	23	283	306	283	306	0.98
7	29	0.00034	0.024	15.3	0.7	1	23	313	335	313	335	0.97
8	29	3.5e-06	0.00024	21.5	3.0	1	23	341	363	341	363	0.98
9	29	0.00056	0.039	14.6	0.3	1	23	442	465	442	465	0.97
10	29	0.95	67	4.4	0.2	2	23	492	514	491	514	0.94
11	29	0.0035	0.25	12.1	1.7	1	23	536	558	536	558	0.98
12	29	2.9e-05	0.002	18.6	0.9	1	23	562	584	562	584	0.98
13	29	0.00064	0.045	14.4	0.2	1	21	618	638	618	641	0.90
14	29	5.8	4.1e+02	1.9	2.0	1	13	648	660	648	662	0.89
15	29	3.2	2.3e+02	2.7	0.4	1	19	708	726	708	730	0.86
16	29	0.014	0.97	10.2	1.0	2	23	755	777	754	777	0.91
17	29	0.0072	0.51	11.1	1.6	1	23	799	821	799	821	0.98
18	29	8.4e-05	0.0059	17.2	1.1	1	23	825	847	825	847	0.98
19	29	0.22	15	6.4	1.1	1	23	881	904	881	904	0.92
20	29	0.0016	0.11	13.1	1.5	1	23	952	974	952	974	0.97
21	29	2.6	1.9e+02	3.0	0.2	2	23	998	1020	997	1020	0.89
22	29	0.96	67	4.4	3.0	3	23	1044	1064	1043	1064	0.97
23	29	3.5e-05	0.0025	18.4	1.4	3	23	1070	1090	1069	1090	0.97
24	29	0.052	3.6	8.4	2.8	1	23	1097	1120	1097	1120	0.98
25	29	0.00032	0.023	15.3	2.8	1	23	1126	1149	1126	1149	0.97
26	29	0.0019	0.13	12.9	0.7	1	23	1155	1178	1155	1178	0.97
27	29	0.00058	0.041	14.5	0.5	1	23	1184	1206	1184	1206	0.97
28	29	5.7e-07	4e-05	24.0	1.0	1	23	1212	1234	1212	1234	0.99
29	29	7.6e-05	0.0054	17.3	4.8	1	23	1240	1262	1240	1263	0.96

Sequence Information

Coding Sequence: ATGGACAGTGGAAGAACTGACTCAGGTTTTCTATTTTTAGGAGAATGCTGTCAAACAGAAAACAGAAAGGATAAAACATCTTCTGAAAGTTTACTATCTAGTGATACAAAAGTTATTGAAAAACGACGTTACCAGCGAAGTGCGAGAGCTGAAGCaagatttataacaaaaaagaacGCCACAGCCTTGCTCGAGTGTTGGTCGTTATGTCCATTTAGGTGGAAAAGAAATAGATTTAAATGTGCTTATTGTGAAGATAACTTCACCGAATGCTCAGAGCTGAGAGAACATGTTAAAATATGCTCGATACAACACAGCGTCAAAGATATCTACAgtaaattcaaagaaatgtcACTGATAAACGTTGATATTACTGATGCCACCTGTAGAATTTGTGCCATGTCATTTCAAGGTATCCTTGAAATGCGAAATCACGTTATTGATCACGGGTATGATGTAGATACTACATATCCTGATGGCGTTCTGCCGTTTTGTTTGAACAAGGAATCTTGGAGATGTGTAATATGTTATGAATCTTTTAACAACTTTCTCAAATTGTACGAACACATGAACATACATTATCAGCATTACATATGCGCCACTTGCGGTAAAGGATACATGACAGCGCCGAGATTGCGCAAACATTCTGAAGTACATATAACTGGGACTTTTCCATGTGATAAGTGTCGGCGAATTTTCACCATGCGTGCAGCTAGAGATTATCATAAAGCTCACGCTCATGCTAAGGGACCTCGTTACGAATGTCCACAATGTAATATGAGGTTTGGAGGCTACTATGAAAGAATGAATCATTTAAATGAGGCTCATAGAGAAAAGGAAGTCTCTTACAAGTGTGCTCATTGTGAGTTATCTTTTAAAACTAGCGGAAAACGTGCAATTCATGTTAGATCCGTTCATTTTCCACAGCAACGCAACTTTGCTTGTCCTTTTTGTAAATGGCTATTTAAAACTGGTTATGAATTAAAAAGACATATGGTGAGACATACAGGAGAAAGAAATTTCTGTTGTACTATATGCGGAAAAACGTTTCCAAGAAATAGAGCATTAAGAGCTCATTTCAAAACGCATGAAGACCTTAGTTgtTCCGCTATTGCGGATTACGAAGAGTTAATAGTAGGAGTTAAACGCATTAGAAAGTTAAAGGAGAACGTCTGTGCGAGGCAAATGCGTCGTCGACGGCGCGCCAACAACGAGCTACCAGAAGAATCTGAGAAAAGAATATCTAAAACAATGATGCGTAGAAATGCCATGACGCTTCTCGAATATTCAACTGCTTGGGCCTTCCGTTGGTTTCAAAGCGCTTTTTTTTGTTCCTATTGCGATGCTAAATACGTTGATCCAGTACTTTTACGTAACCATGTTCAGACCTTTCACATTGCCGATGCTCCAACGAAACGAATATTCTCAAAACTCACCGAAAACAACAtggttaaaatagatattttaagctTACGTTGTAGGCTGTGTGATTTTGAAATAAGTAGTTTGGAATTAatgaaaaatcatttaatttctggacataaaaaaatatttcacctaAACTATAACGATGGTGTTTTACCATTCATTCTTCAACCTAATAGATTTGAATGCCAAATGTGTGATGCGGCATTCTCGAGTTTTTGTAAGATTAACGAACATATGAACActcattataaaaattatatttgcgaTACATGTGGTAAAGCGTTTATTTCAAAATCAAGGTTCAGAACTCACGTCCAATCACATGAGATTGGTAATTTTCCTTGCGGAGAATGTGAAGAAATTTTGGAAACGAGAGCTGCCAGAATGTGCCATAGATTGAGAATACACAAAAAGGGAATACGGTACACATGTCCATATTGTCCAGAAGTATTTACTACTTATTACGCAAGAGCCAAACATTTAGTGGATGGACATAatcaacaaaagaaaaattatgagTGTTCATCTTGTGgaaaattatttgaaactaGTTgcACAGAAGCCATCGGAACAACAAAAAATTCAATAGCCATTGAGTGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCTAATTCGGCCGTAATACTAGATTGCTCAAATGCTATAGTATTTCGATGGTCGCGTGGTAAATTTCTTTGTGCCTACTGTCCAGAAATATTCCAAAACGTAGCAGAAATACGCAAGCATTGCGACATACATGAAAAGCTTACAGTACTTCAGAAACCAGAAGTACACAATTCATTCCCACTCAAAATAGATATAACTGATTTAAAGTGCACGCTGTGTAATAATAGTTTCAAAAAATTAACGGATTTCAAAGTTCATTTAGTTAATGTCCACAGTAAAGTATTTGACTCAAACTACGACGACGGTGTAATTCCGTTCATACTTACGGGCTCGGAGTACAGATGTGTCATTTGTCACAACTTGTTTGAAAGCTACGTGAATTTATTCAGTCATATGAATGAACATTATCAAAGTTTTGTATGCTACACGTGTGGTAAAGGATACTCGGCAAAATATAAACTGCGAGCACATCAGAAAAGTCACGAGACCGGTAAAGTGCCATGTTCAAGATGTgacttagtatttttaaatcatgTTATAAAAAACCGGCACGTGGCTACAGTGCATGGATCCAAGAAAAGATATCGTTGTCCAATTTGCGCTATGGCTTTCGAATCTTGCCATTCGAGATTGATACATCTTGGGAAAGTACATGGACAAAAAAGCGAATATCGATGGACATTCacaaagtttatatggaaacgTGGACGAAGGCTTTACAATGATCACAGAGATAACGCTGCTACTATTATACAATTCTCAAATGTTTGTCCTTTTCGCTGGAAACGCGGAGCTTTCGCTTGCTCTCATTGTCCGAGAACTTTTGGCAACTTTAAAGATGTTAGTAATCATATGCAGGAGCATCCTAATCGCCTTGAGGCAATGCGATATGCTCGCCCTTATGATAATGTAAAGGTGGAAATAAGTAATCTTCAATGTGCaatttgtaatgaaaatatgaatggcTTAGAGCATCTTAAAGACCATTTGTTTGAAGGTCACCAAAAATCAATCACCAAAGACCTTAGTCTTGGTGTAAccccttttattttaaaagaaaaagaaatgctTTGTACTCATTGTGATGAACGTTTTCTCTTGTTTTCAAGATTGAACAGTCACATGAACCAACACTATCCAAATAATATCTGTCCTCACTGCGGTAAATCATTCTCTGCCGCTCATCGCCTTAAGGCCCACCAACTAATACATGAAACTAATAACCAAGAGCATAAATGTGCCAAATGTGGTGATATATTCGAGACGcgatctttaaaaaattatcacaTGAACACTAAACATGCAACAGAAAATCGATACAGATGTCCCTATTGTAGAATATCGTTTAAGCGCTACTCAGATAGAGTTCGTCACCTGAAGCAGTTTCACAATCAAAGCGTGGAATATCCATGTCATTTATGTACAGCAGTTTTCGCTATGTCCGACCAAAGAACCAAACATATAAGAAACGTTcatattaaacataaacaatTTCAGTGTGATTTCTGTCCAAGTAAGTTTGTTACTGCCGGTCAGTTGAAGAGTCATTTAGTAAAACACAGTGGTGTCAAGGAATATCAATGCAACGTGTGCAAGAAGAGTTACGCGAGAGCTAGAACTTTGAAAGAACATATGAGAATACATAATAATGATAGAAGATTCGTTTGCGAATACTGTAATAATGCGTTTATTCAAAAATGTAGTCTCAAAAGTCATATTCGAACACATCACCCGAATGCGGAACCAGTGAAAATTtcagtataa
Protein Sequence: MDSGRTDSGFLFLGECCQTENRKDKTSSESLLSSDTKVIEKRRYQRSARAEARFITKKNATALLECWSLCPFRWKRNRFKCAYCEDNFTECSELREHVKICSIQHSVKDIYSKFKEMSLINVDITDATCRICAMSFQGILEMRNHVIDHGYDVDTTYPDGVLPFCLNKESWRCVICYESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCRRIFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSVHFPQQRNFACPFCKWLFKTGYELKRHMVRHTGERNFCCTICGKTFPRNRALRAHFKTHEDLSCSAIADYEELIVGVKRIRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFFCSYCDAKYVDPVLLRNHVQTFHIADAPTKRIFSKLTENNMVKIDILSLRCRLCDFEISSLELMKNHLISGHKKIFHLNYNDGVLPFILQPNRFECQMCDAAFSSFCKINEHMNTHYKNYICDTCGKAFISKSRFRTHVQSHEIGNFPCGECEEILETRAARMCHRLRIHKKGIRYTCPYCPEVFTTYYARAKHLVDGHNQQKKNYECSSCGKLFETSCTEAIGTTKNSIAIEWRKKRPFLENKANSAVILDCSNAIVFRWSRGKFLCAYCPEIFQNVAEIRKHCDIHEKLTVLQKPEVHNSFPLKIDITDLKCTLCNNSFKKLTDFKVHLVNVHSKVFDSNYDDGVIPFILTGSEYRCVICHNLFESYVNLFSHMNEHYQSFVCYTCGKGYSAKYKLRAHQKSHETGKVPCSRCDLVFLNHVIKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKVHGQKSEYRWTFTKFIWKRGRRLYNDHRDNAATIIQFSNVCPFRWKRGAFACSHCPRTFGNFKDVSNHMQEHPNRLEAMRYARPYDNVKVEISNLQCAICNENMNGLEHLKDHLFEGHQKSITKDLSLGVTPFILKEKEMLCTHCDERFLLFSRLNSHMNQHYPNNICPHCGKSFSAAHRLKAHQLIHETNNQEHKCAKCGDIFETRSLKNYHMNTKHATENRYRCPYCRISFKRYSDRVRHLKQFHNQSVEYPCHLCTAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKSHLVKHSGVKEYQCNVCKKSYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPNAEPVKISV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00160039;
90% Identity: iTF_00775429;
80% Identity: -