Basic Information

Insect: Heliconius charithonia
Gene Symbol: -
Assembly: GCA_030704555.1
Location: CM060824.1:814410-819196[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.15 12 7.1 0.6 1 21 79 99 79 100 0.95

2 31 7.2 5.5e+02 1.9 0.1 2 23 128 149 128 149 0.90

3 31 0.016 1.2 10.2 0.3 2 23 172 193 171 193 0.97

4 31 0.022 1.7 9.8 0.1 1 23 197 219 197 219 0.95

5 31 2.4 1.8e+02 3.4 0.7 1 15 224 238 224 247 0.78

6 31 0.062 4.8 8.4 0.2 1 23 253 276 253 276 0.94

7 31 0.0025 0.19 12.7 1.2 1 23 283 306 283 306 0.98

8 31 0.00041 0.031 15.2 0.7 1 23 313 335 313 335 0.97

9 31 4.2e-06 0.00032 21.5 3.0 1 23 341 363 341 363 0.98

10 31 0.00012 0.0095 16.9 0.6 2 23 367 389 366 389 0.96

11 31 0.00068 0.052 14.5 0.3 1 23 467 490 467 490 0.97

12 31 1.2 89 4.4 0.2 2 23 517 539 516 539 0.94

13 31 0.0043 0.33 12.0 1.7 1 23 561 583 561 583 0.98

14 31 3.5e-05 0.0027 18.6 0.9 1 23 587 609 587 609 0.98

15 31 0.00078 0.06 14.4 0.2 1 21 643 663 643 666 0.90

16 31 7 5.4e+02 1.9 2.0 1 13 673 685 673 687 0.89

17 31 3.9 3e+02 2.7 0.4 1 19 733 751 733 755 0.86

18 31 0.017 1.3 10.2 1.0 2 23 780 802 779 802 0.91

19 31 0.0087 0.67 11.1 1.6 1 23 824 846 824 846 0.98

20 31 0.0001 0.0078 17.1 1.1 1 23 850 872 850 872 0.98

21 31 0.26 20 6.4 1.1 1 23 906 929 906 929 0.92

22 31 0.002 0.15 13.1 1.5 1 23 977 999 977 999 0.97

23 31 2.1 1.6e+02 3.6 0.2 2 23 1023 1045 1022 1045 0.89

24 31 1.2 89 4.4 3.0 3 23 1069 1089 1068 1089 0.97

25 31 4.3e-05 0.0033 18.3 1.4 3 23 1095 1115 1094 1115 0.97

26 31 0.063 4.8 8.4 2.8 1 23 1122 1145 1122 1145 0.98

27 31 0.00039 0.03 15.3 2.8 1 23 1151 1174 1151 1174 0.97

28 31 0.0023 0.18 12.9 0.6 1 23 1180 1203 1180 1203 0.97

29 31 0.0007 0.054 14.5 0.5 1 23 1209 1231 1209 1231 0.97

30 31 6.9e-07 5.3e-05 24.0 1.0 1 23 1237 1259 1237 1259 0.99

31 31 9.2e-05 0.0071 17.3 4.8 1 23 1265 1287 1265 1288 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.15	12	7.1	0.6	1	21	79	99	79	100	0.95
2	31	7.2	5.5e+02	1.9	0.1	2	23	128	149	128	149	0.90
3	31	0.016	1.2	10.2	0.3	2	23	172	193	171	193	0.97
4	31	0.022	1.7	9.8	0.1	1	23	197	219	197	219	0.95
5	31	2.4	1.8e+02	3.4	0.7	1	15	224	238	224	247	0.78
6	31	0.062	4.8	8.4	0.2	1	23	253	276	253	276	0.94
7	31	0.0025	0.19	12.7	1.2	1	23	283	306	283	306	0.98
8	31	0.00041	0.031	15.2	0.7	1	23	313	335	313	335	0.97
9	31	4.2e-06	0.00032	21.5	3.0	1	23	341	363	341	363	0.98
10	31	0.00012	0.0095	16.9	0.6	2	23	367	389	366	389	0.96
11	31	0.00068	0.052	14.5	0.3	1	23	467	490	467	490	0.97
12	31	1.2	89	4.4	0.2	2	23	517	539	516	539	0.94
13	31	0.0043	0.33	12.0	1.7	1	23	561	583	561	583	0.98
14	31	3.5e-05	0.0027	18.6	0.9	1	23	587	609	587	609	0.98
15	31	0.00078	0.06	14.4	0.2	1	21	643	663	643	666	0.90
16	31	7	5.4e+02	1.9	2.0	1	13	673	685	673	687	0.89
17	31	3.9	3e+02	2.7	0.4	1	19	733	751	733	755	0.86
18	31	0.017	1.3	10.2	1.0	2	23	780	802	779	802	0.91
19	31	0.0087	0.67	11.1	1.6	1	23	824	846	824	846	0.98
20	31	0.0001	0.0078	17.1	1.1	1	23	850	872	850	872	0.98
21	31	0.26	20	6.4	1.1	1	23	906	929	906	929	0.92
22	31	0.002	0.15	13.1	1.5	1	23	977	999	977	999	0.97
23	31	2.1	1.6e+02	3.6	0.2	2	23	1023	1045	1022	1045	0.89
24	31	1.2	89	4.4	3.0	3	23	1069	1089	1068	1089	0.97
25	31	4.3e-05	0.0033	18.3	1.4	3	23	1095	1115	1094	1115	0.97
26	31	0.063	4.8	8.4	2.8	1	23	1122	1145	1122	1145	0.98
27	31	0.00039	0.03	15.3	2.8	1	23	1151	1174	1151	1174	0.97
28	31	0.0023	0.18	12.9	0.6	1	23	1180	1203	1180	1203	0.97
29	31	0.0007	0.054	14.5	0.5	1	23	1209	1231	1209	1231	0.97
30	31	6.9e-07	5.3e-05	24.0	1.0	1	23	1237	1259	1237	1259	0.99
31	31	9.2e-05	0.0071	17.3	4.8	1	23	1265	1287	1265	1288	0.96

Sequence Information

Coding Sequence: ATGGACAGTGGAAGAACTGACTCAGGTTTTCTATTTTTAGGAGAACGCGGTCAAACAGAAAAAAGAAAGGATAATACATCTTCTGAAACTTTACTATCTCGTGATACGAAAGTTATTGAAAAACGACGTTATCAGCGAAGTGCGAGAGCTGAAGCaagatttataacaaaaaagaacGCCACAGCCTTGCTAGAGTGTTGGTCGTTATGTCCCTTTAGGTGGAAAAGAAATAGATTTAAATGTGCTTATTGTGAAGATAACTTCATCGAATGCTCAGAGCTGAGAAACCATGTTAAAATATGCTCGCTACAACACAGCGTCAAAGATATCTACAGTAAATTCAAAGAAATGTCACTTATAAACGTTGATATTACTGAGGCCACCTGTAAAATTTGTGCCATGCCATTTCAAAGTATTCTTGACATGCGAAATCACGTTATTGATCACGGATATGATGTAGATACTACATATCCTGATGGCGTTCTGCCGTTTTGTTTGAACAAGGAATCTTGGAGATGTGTAATATGTTATGAATCTTTTAATAACTTTCTCAAATTGTACGAACACATGAACATACATTATCAACATTACATATGCGCCACTTGCGGCAAAGGATACATGACGGCGCCGAGATTGCGCAAACATTCTGAAGTACATATATCTGGGACTTTTCCATGTGATAAGTGTCGACGAATTTTCACCATGCGTGCAGCTAGAGATTATCATAAAGCTCATGCTCATGCTAAGGGACCTCGTTACGAATGTCCACAATGCAATATGAGGTTTGGAGGCTATTATGAAAGAATGAATCATTTGAATGAGGCTCATAGAGAAAAGGAAGTTTCTTACAAGTGTGCTCATTGTGAGTTATCTTTTAAAACTAGCGGAAAACGTGCAATTCATGTTAGATCCGTTCATTTTCCACAGCAACGCAACTTTGCTTGTCCTTTTTGTAAATGGCTTTTTAAAACTGGTTATGAATTAAAAAGACATATGGTGAGGCATACGGGAGAAAGAAATTTCTGTtgtactatatgcgggaaaacGTTTCCAAGAAATAGAGCATTAAGAGCTCATTTCAAAACGCATGAAGACCTTAGTTGTAAATGGTGTGGAGTGATTTTCAAACAAAAGACACTTTTATTGACTCATCTGCGATCCAATCATCCGGAAATAAgtTCCGCTATTGCGGATTATGAAGAGTTAGTAGTAGGAGTTAAACGCATTAGAAAGTTAAAGGAGAACGTCTGTGCGAGGCAAATGCGTCGTCGACGGCGCGCCAACAACGAGCTACCAGAAGAATCTGAGAAAAGAATATCCAAAACAATGATGCGTAGAAATGCCATGACGCTTCTCGAATATTCAACTGCCTGGGCCTTCCGTTGGTTTCAAAGCGCTTTTTTTTGTTCCTATTGCGATGCTAAATACGTTGATCCAGTACTTTTACGTAACCATGTTCAGACCTTTCACATTGCCGATGCTCCAACGAAACGAATATTCTCTAAACTCACCGAAAACAACATggttaaaatagatattttaagctTGCGTTGTAGGCTGTGTGATTTTGAAATAAGTAGTTTGGAATTAatgaaaaatcatttaatttcagGACATGAGAAAATATTTCACCAAAACTATAACGATGGTGTTTTACCATTCATTCTTGAACCTAATAGATTTGAATGCCAAATGTGTGATGCGGCATTCTCGAGTTTTTGTAAGATTAATGAACATATGAACActcattataaaaattacatttgcgATACATGTGGTAAAGCGTTTATTTCAAAATCAAGGTTTAGAACTCACGTCCAATCACATGAGATTGGTAATTTTCCTTGCGGAGAATGTGAAGAAATTTTGGAAACGAGAGCTGCCAGAATGTGCCATAGATTAAGAATACACAAAAAAGGCGTACGATACACATGCCCATATTGTCCAGAAGTATTTACTACTTATTACGCAAGAGCCAAACATTTAGTGGATGGACATaatcaagaaaagaaaaattatgaaTGTTCATCTTgtggaaaattatttgaaactaGTTgcACAGAAGCCACCGGAACAACAAAAAACTCAATAGCGATTGAGTGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCTAATTCGGCCGTAATACTAGATTGCTCAAATGCTATAGTATTTCGATGGTCACGTGGAAAATTTCTTTGTGCCTACTGTCCAGAAATATTCCAAAACGTAGCAGAAATACGCAAGCATTGCGATATACATGAAAAGCTTACAGTACTTCAGAAACCAGAAGTACACAATTCATTCCcactaaaaatagatataacagATTTAAAGTGCACGTTGTGTAATAATAGTTTCAAAAAATTAACGGATTTCAAAGTTCATTTAGTTAATGTCCACAGTAAAGTATTTGACTCAAACTACGACGACGGTGTTATTCCGTTCATACTTACGGGCTCTGAGTACAGATGTGTCATTTGTCACAACTTGTTTGAAAGCTACGTGAATTTATTTAGTCATATGAATGAGCATTATCAAAGTTTTGTATGCTACACGTGTGGTAAAGGATATTCAGCCAAATATAAACTGCGAGCACATCAGAAAAGTCACGAGACCGGTAAAGTGCCATGTTCAAGATGTgacttagtatttttaaatcatgttaTAAAAAACCGGCACGTAGCTACAGTGCATGGATCCAAGAAAAGGTATCGTTGTCCAATTTGCGCTATGGCTTTCGAATCTTGCCATTCGAGATTGATACATCTTGGGAAAGTACATGGACAAAAAAGCGAATATCGATGGACATTCacaaagtttatatggaaacgTGGACGAAGGCTTTACAATGATCACAGAGATAACGCCGCAACTATTATACAATTCTCAAATGTTTGTCCTTTTCGCTGGAAACGCGGAGCTTTCGCTTGTTCTCATTGTCCGAGAACTTTTGGCAACTTTAAAGACGTTAGTAATCATATGCAGGAGCATCCTAATCGCCTTGAGGCAATGCGATATGCTCGTCCTTATGATAATGTAAAGGTGGAAATAAGTAACCTTCAATGTGgaatttgtaatgaaaatatgaatggcTTAGAACATCTTAAAGACCATTTGTTTGAAGGTCACCAAAAATCAATCACCAAAGACCTTAGTCTTGGTGTAAccccttttattttaaaagaaaaagaaatgctTTGTACTCATTGTGATGAACGTTTCCTTTTGTTTTCAAGATTGAACAGTCACATGAACCAACATTATCCAAATAATATCTGTCCTCACTGCGGTAAATCTTTCTCTGCCGCTCATCGCCTTAAGGCCCACCAACTAATACATGAAACTAATAACCAAGAGCATAAATGTGCCAAATGTGGTGATATATTCGAGACGcgatctttaaaaaattatcacaTGAACACTAAACATGCAACAGAAAATCGATACAGATGTCCCTATTGTAGAATATCGTTTAAGCGTTACTCAGATAGAGTTCGTCACCTGAAGCAGTTTCACAATCAAAGCGTAGAATATCCATGTCATTTATGTTCAGCAGTTTTTGCTATGTCTGACCAAAGAACCAAACATATAAGAAACGttcatattaaacataaacaatttCAGTGTGATTTTTGCCCAAGTAAGTTTGTTACTGCCGGTCAGTTGAAGAGTCATTTAGTAAAACACAGTGGTGTCAAGGAATATCAATGCAACGTGTGCAAGAAGAGTTACGCGAGAGCTAGAACTTTGAAAGAACATATGAGAATACATAATAATGATAGAAGATTCGTTTGCGAATACTGTAATAATGCGTTTATTCAAAAATGTAGTCTTAAAAGTCATATTCGAACACATCACCCGAATGTGGAACCAGTGAAAATTTCAGTATAG
Protein Sequence: MDSGRTDSGFLFLGERGQTEKRKDNTSSETLLSRDTKVIEKRRYQRSARAEARFITKKNATALLECWSLCPFRWKRNRFKCAYCEDNFIECSELRNHVKICSLQHSVKDIYSKFKEMSLINVDITEATCKICAMPFQSILDMRNHVIDHGYDVDTTYPDGVLPFCLNKESWRCVICYESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHISGTFPCDKCRRIFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSVHFPQQRNFACPFCKWLFKTGYELKRHMVRHTGERNFCCTICGKTFPRNRALRAHFKTHEDLSCKWCGVIFKQKTLLLTHLRSNHPEISSAIADYEELVVGVKRIRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFFCSYCDAKYVDPVLLRNHVQTFHIADAPTKRIFSKLTENNMVKIDILSLRCRLCDFEISSLELMKNHLISGHEKIFHQNYNDGVLPFILEPNRFECQMCDAAFSSFCKINEHMNTHYKNYICDTCGKAFISKSRFRTHVQSHEIGNFPCGECEEILETRAARMCHRLRIHKKGVRYTCPYCPEVFTTYYARAKHLVDGHNQEKKNYECSSCGKLFETSCTEATGTTKNSIAIEWRKKRPFLENKANSAVILDCSNAIVFRWSRGKFLCAYCPEIFQNVAEIRKHCDIHEKLTVLQKPEVHNSFPLKIDITDLKCTLCNNSFKKLTDFKVHLVNVHSKVFDSNYDDGVIPFILTGSEYRCVICHNLFESYVNLFSHMNEHYQSFVCYTCGKGYSAKYKLRAHQKSHETGKVPCSRCDLVFLNHVIKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKVHGQKSEYRWTFTKFIWKRGRRLYNDHRDNAATIIQFSNVCPFRWKRGAFACSHCPRTFGNFKDVSNHMQEHPNRLEAMRYARPYDNVKVEISNLQCGICNENMNGLEHLKDHLFEGHQKSITKDLSLGVTPFILKEKEMLCTHCDERFLLFSRLNSHMNQHYPNNICPHCGKSFSAAHRLKAHQLIHETNNQEHKCAKCGDIFETRSLKNYHMNTKHATENRYRCPYCRISFKRYSDRVRHLKQFHNQSVEYPCHLCSAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKSHLVKHSGVKEYQCNVCKKSYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPNVEPVKISV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00160039;
90% Identity: iTF_00781191; iTF_00781997; iTF_00782806; iTF_00776858; iTF_01182044; iTF_00780415; iTF_00778169;
80% Identity: -