Djun022923.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- -
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000101.1:261309-266073[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.022 2 9.7 1.0 1 21 79 99 79 100 0.95 2 30 0.0037 0.33 12.1 0.4 2 23 172 193 171 193 0.97 3 30 0.02 1.8 9.8 0.1 1 23 197 219 197 219 0.95 4 30 2.2 2e+02 3.4 0.7 1 15 224 238 224 247 0.78 5 30 0.026 2.4 9.4 1.4 1 23 253 276 253 276 0.95 6 30 0.0023 0.21 12.8 1.2 1 23 283 306 283 306 0.98 7 30 0.00026 0.024 15.7 1.2 1 23 313 335 313 335 0.97 8 30 1e-05 0.00094 20.1 4.1 1 23 341 363 341 363 0.97 9 30 0.00078 0.07 14.2 0.1 1 23 442 465 442 465 0.97 10 30 0.56 51 5.3 0.2 2 23 492 514 491 514 0.95 11 30 1.2 1.1e+02 4.3 1.6 1 23 536 558 536 558 0.96 12 30 1.4e-05 0.0013 19.7 0.9 1 23 562 584 562 584 0.98 13 30 0.00073 0.066 14.3 0.2 1 21 618 638 618 641 0.90 14 30 6.4 5.8e+02 1.9 2.0 1 13 648 660 648 662 0.89 15 30 2.5 2.2e+02 3.2 0.9 1 19 708 726 708 730 0.88 16 30 0.0097 0.88 10.8 0.3 2 21 755 774 754 777 0.89 17 30 0.0026 0.23 12.6 0.4 1 23 799 821 799 821 0.98 18 30 0.0097 0.88 10.8 3.2 1 21 825 845 825 847 0.95 19 30 0.24 22 6.4 1.1 1 23 881 904 881 904 0.92 20 30 1.2 1.1e+02 4.2 0.2 1 12 910 921 910 924 0.91 21 30 0.0018 0.16 13.1 1.5 1 23 965 987 965 987 0.97 22 30 1.9 1.8e+02 3.6 0.2 2 23 1011 1033 1010 1033 0.89 23 30 1.1 96 4.4 3.0 3 23 1057 1077 1056 1077 0.97 24 30 3.9e-05 0.0035 18.3 1.4 3 23 1083 1103 1082 1103 0.97 25 30 0.085 7.7 7.8 2.9 1 23 1110 1133 1110 1133 0.97 26 30 0.00035 0.032 15.3 2.8 1 23 1139 1162 1139 1162 0.97 27 30 0.0038 0.34 12.1 0.7 1 23 1168 1191 1168 1191 0.97 28 30 0.00064 0.058 14.5 0.5 1 23 1197 1219 1197 1219 0.97 29 30 2.4e-06 0.00022 22.2 1.0 1 23 1225 1247 1225 1247 0.99 30 30 8.2e-05 0.0074 17.3 5.9 1 23 1253 1275 1253 1276 0.96
Sequence Information
- Coding Sequence
- atggaCAGTGGAAGAATTGACACgagttttatgtttttaggAGAACGCGGTCAAACAGAGAACGAAAATGATAAAACCTCCTTTGAAAATGTACTGTTTAGTGATACGAAGGTTATGGAAAAACGACGCTATCAGAGAAGTGCGAGAGCTGAAGCGAGATTTATAACAAAGAAGAATGCAACAGCTTTACTTGAATGTTGGTCGCTATGTCCATTCAGATGGAAAAGGAATAGATTCAAGTGTGCTTATTGTGAAGATAACTTTACCGATTGTTCAGAGTTAAGAGAACATGTCAAATTGTGCTCGATACAACACAGCGTCAAAGatatatacagtaaatttaaagaaatgtcCCTAATAAACGTCGATATCACTGAGGCCACCTGTAGAATTTGTGCCATGCCCTTTCAAGGTATTCCCGAAATGCGAAATCACGCAATAGATCATGGGTATGTTGTAGATACTGCATATCCAGACGGCATTCTGCCATTTTGCTTAAACAAGGAATCTTGGAAATGTGTCATATGTCAGGAGTCTTTTAATAACTTTCTCAAATTGTATGAACATATGAACATTCATTATCAACATTATATCTGTGCCACTTGCGGTAAAGGTTACATGACAGCGCCGAGATTGCGCAAACATTCTGAAGTTCACATAACTGGAACTTTTCCTTGTGATAAGTGTCGGCGAATTTTCACCATGCGTGCGGCTAGAGATTACCATAAAGCTCATGCACATGCTAAAGGACCTCGTTATGAATGTCCCCAATGTAATATGAGATTTTGTGGTTACTACGAGAGGATGAATCATTTAAATGAGGCTCATAGAGAAAAGGAAGTCTCCTACAAGTGTGCTCATTGtgaattatcttttaaaactAGCGGAAAACGTGCAATTCATGTTAGATCTATACATTTTCCGCAACAGCGTAATTTCTCTTGTCCTTTTTGTAAATGGCTGTTTAAAACTGGTTATGAACTGAAACGACATATGGTTAGACATACTGGAGAGCGAAACTTTTGTTGTACCATATGCGGGAAGACGTTTCCAAGGAATAGAGCGTTAAGGACTCATTTTAAAACGCATGAAGACCTGAGTTGTTCCGCTATTGCGGACTCTGAAGATTTAGTAGTAGGAGTTAAACGCGTTAGAAAGTTAAAGGAGAATGTCTGCGCGAGGCAAATGCGTCGTCGGCGGCGCGCCAACAACGAGCTACCAGAGGAATCTGAGAAAAGAATATCTAAAACAATGATGCGTAGAAATGCCATGACGCTACTCGAATGTTCTACTGCTTGGGCTTTCCGTTGGTTTCAAAGCGCCTTTTTTTGTTCCTATTGTGATGCTAAATATGTTGATCCAGTACTATTACGTAGTCATGTCCAGACTGGTCATATTGCCGACGCTCCTACGAAACGAATATTCTCAAAACTTACAGAAAATAATATGGtcaaaatagatatatcaaaCATGCGTTGTAGGCTTTGTGATTATGAAATAAGTAATGTAGAATTGATGAAAAAGCATTTGATATCTGTACATGACAAAATATTCCACCTGAATTACAACGATGGTGTTTTACCGTTTATACTTGAACCTAATAGATTTGACTGCCAAATGTGTGATGCAGTGTTCTTGAGTTTTTGTAAGATTAACGAGCACATGAACACTCATTATAAGAATTACGTTTGCGATACGTGTGGTAAAGCGTTTGTTTCAAAATCAAGGTTTAGGACTCACGTTCAGTCGCATGAAATCGGAAATTTTCCTTGCGGCGAATGTGACGAGATCTTGGAAACGAGAGCTGCTAGAATGTGTCATAGATTAAGAATACACAAAAAAGGAGTTCGTTACACATGCCCATATTGCCCTGAAGtgtttacaacttattatgcCAGAGCGAAACATTTAGTGGATGAACATAATCAACAAAAGAAGGATTATGAGTGTTCATCTTGcggaaaattatttgaaacgaGTTgcACAGAAGCCCTCGGAAAACCAAAAAGCTCAATAAAGATTGAATGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCTAACTCAGCTGTAATACTAGAATGCTCAAATGCTATAGTATTTCGATGGTCTCGTGGTAAATTTTTCTGTGCTTATTGCccacaaatatttcaaaatgtggCAGAAATCCGCAAGCACTGTGATATACATGAAAAGCTTTCAGTACTTCAGAAACCAGAAGTGCACAATTCTTTTCCACTCAAAATAGACATTACAGATTTGAAATGCACATTGTGTAACAgtagttttaaaaacataacagACTTAAAAATCCATTTAGTGGATGTGCACGATAAAGTTTTTGACTCAAACTACGACGATGGTGTCATTCCATTCGTGCTTACGGGCTCAGAATACAGATGTGTAATTTGTGACAATTTGTTTGAAAGCTATGTAAACCTGTTTAGTCATATGAATGAGCATTACCAAAGTTTTGTATGCTATACGTGCGGTAAAGGATACTCAGCGAAATATAAACTGCGAGCACATCAGAAATGTCACGAGACCGGTAAAGTGCCATGTTCAAGATGTGACCTGGTATTTTTGAATCATGTTATAAAAAACCGACACGTGGCTACAGTGCATGGATCCAAGAAGAGGTATCGTTGCCCAATATGTGCTATGGCATTCGAGTCGTGCCATTCGAGATTGATACACCTTGGCAAAGTACACGGACAAAAAAGCGAATATCGATGTAAAATGTGTCCGGCAGTATTTAATACTGGGACGTCTCgaACAGTCACAACGTTTATATGGAAACGGGGACGAAGGCTTTATAACGATCACAGAGATAACGCCGCGACTATTATTCAGTTTTCAAACGTTTGTCCTTTCCGCTGGAAGCGTGGAGCGTTCGCTTGCTCCCATTGCCCAAGAACTTTTGGTAATTTTAAAGACGTGAGCAATCATATGCAGGAGCATCCTAATCGCCTAGAGGCAATGCGATACGCTCGCCCATATGACaatgtaaaaatagaaataagcaACCTTCAGTGTGGTATTTGCAATGAAAATATGAACGGCTTAGAGCATCTTAAGGACCATTTGTTCGAAGTGCACGAAAAGTCAATAACCAAAGATCTTAGTCTTGGTGTAActccttttatattaaaggatAAAGAAATGCTTTGTACTCATTGTGATGaacgttttcttttattttcgcGTCTAAATAGTCATATGAATCAACACTATCCTAACAACATTTGCCCTCACTGTGGAAAATCCTTCTCCGCCGCTCACCGCCTTAAGGCCCACCAGCTTATACATGAAACGAATAACCAAGAGCATAAATGTGCGAAATGTGGCGATGTATTCGAGACgcgaactttaaaaaattatcacatGAACACAAAACATGCGACTGAAAATCGATACAGATGTCCGTATTGTAGAATATCTTTCAAACGCTACTCAGATAGAGTTCGTCACTTGAAGCAGTTTCACAACCAAAGTGTAGAATATGCTTGTCATTTGTGTACAGCGGTATTCGCCATGTCCGACCAAAGAACaaagcatataagaaatgttcatattaaacataaacaatttCAATGTGACTTTTGTCCAAGTAAGTTTGTTACCGCTGGTCAGTTGAAGAGTCACTTGGTCAAGCACAGCGGCGTCAAGGAGTACCAATGCAACGTTTGCAAGAAGAATTACGCGAGAGCTAGAACTTTGAAAGAGCATATGAGAATACACAATAATGATAGAAGATTCGTTTgcgaatattgtaataatacgtTCATTCAGAAGTGTAGTCTTAAAAGTCATATACGAACACATCACCCGAGTGCTGAACCAgtgaaaatttctatataa
- Protein Sequence
- MDSGRIDTSFMFLGERGQTENENDKTSFENVLFSDTKVMEKRRYQRSARAEARFITKKNATALLECWSLCPFRWKRNRFKCAYCEDNFTDCSELREHVKLCSIQHSVKDIYSKFKEMSLINVDITEATCRICAMPFQGIPEMRNHAIDHGYVVDTAYPDGILPFCLNKESWKCVICQESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCRRIFTMRAARDYHKAHAHAKGPRYECPQCNMRFCGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSIHFPQQRNFSCPFCKWLFKTGYELKRHMVRHTGERNFCCTICGKTFPRNRALRTHFKTHEDLSCSAIADSEDLVVGVKRVRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLECSTAWAFRWFQSAFFCSYCDAKYVDPVLLRSHVQTGHIADAPTKRIFSKLTENNMVKIDISNMRCRLCDYEISNVELMKKHLISVHDKIFHLNYNDGVLPFILEPNRFDCQMCDAVFLSFCKINEHMNTHYKNYVCDTCGKAFVSKSRFRTHVQSHEIGNFPCGECDEILETRAARMCHRLRIHKKGVRYTCPYCPEVFTTYYARAKHLVDEHNQQKKDYECSSCGKLFETSCTEALGKPKSSIKIEWRKKRPFLENKANSAVILECSNAIVFRWSRGKFFCAYCPQIFQNVAEIRKHCDIHEKLSVLQKPEVHNSFPLKIDITDLKCTLCNSSFKNITDLKIHLVDVHDKVFDSNYDDGVIPFVLTGSEYRCVICDNLFESYVNLFSHMNEHYQSFVCYTCGKGYSAKYKLRAHQKCHETGKVPCSRCDLVFLNHVIKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKVHGQKSEYRCKMCPAVFNTGTSRTVTTFIWKRGRRLYNDHRDNAATIIQFSNVCPFRWKRGAFACSHCPRTFGNFKDVSNHMQEHPNRLEAMRYARPYDNVKIEISNLQCGICNENMNGLEHLKDHLFEVHEKSITKDLSLGVTPFILKDKEMLCTHCDERFLLFSRLNSHMNQHYPNNICPHCGKSFSAAHRLKAHQLIHETNNQEHKCAKCGDVFETRTLKNYHMNTKHATENRYRCPYCRISFKRYSDRVRHLKQFHNQSVEYACHLCTAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKSHLVKHSGVKEYQCNVCKKNYARARTLKEHMRIHNNDRRFVCEYCNNTFIQKCSLKSHIRTHHPSAEPVKISI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00160039;
- 90% Identity
- -
- 80% Identity
- -