Dvan023503.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dione vanillae
Gene Symbol
-
Assembly
GCA_037178615.1
Location
JAZFAU010000318.1:2453893-2458551[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.021 2.3 9.9 1.0 1 21 41 61 41 62 0.95
2 26 0.0042 0.46 12.0 0.3 2 23 134 155 133 155 0.97
3 26 0.018 2 10.1 0.1 1 23 159 181 159 181 0.95
4 26 0.71 78 5.0 0.7 1 15 186 200 186 209 0.78
5 26 0.051 5.7 8.6 0.2 1 23 215 238 215 238 0.94
6 26 0.00059 0.066 14.7 1.2 1 23 245 268 245 268 0.98
7 26 0.00033 0.037 15.5 0.7 1 23 275 297 275 297 0.97
8 26 9.3e-06 0.001 20.4 4.1 1 23 303 325 303 325 0.98
9 26 0.0001 0.011 17.1 0.6 2 23 329 351 328 351 0.96
10 26 0.0008 0.089 14.3 0.3 1 23 429 452 429 452 0.97
11 26 0.00065 0.072 14.6 0.2 1 21 525 545 525 548 0.90
12 26 5.8 6.4e+02 2.2 2.0 1 13 555 567 555 569 0.89
13 26 7.2 8e+02 1.8 0.0 1 12 615 626 615 630 0.86
14 26 0.00016 0.018 16.5 0.5 1 23 632 654 632 654 0.98
15 26 0.0087 0.97 11.0 3.2 1 21 658 678 658 680 0.95
16 26 0.15 16 7.2 1.5 1 23 714 737 714 737 0.93
17 26 0.0021 0.23 13.0 1.1 1 23 785 807 785 807 0.96
18 26 0.47 52 5.6 0.2 2 23 831 853 830 853 0.90
19 26 0.95 1.1e+02 4.6 3.0 3 23 877 897 876 897 0.97
20 26 3.5e-05 0.0039 18.6 1.4 3 23 903 923 902 923 0.97
21 26 0.002 0.22 13.0 2.9 1 23 930 953 930 953 0.98
22 26 0.00032 0.035 15.6 2.8 1 23 959 982 959 982 0.97
23 26 0.0053 0.59 11.7 0.7 1 23 988 1011 988 1011 0.97
24 26 0.00057 0.063 14.7 0.5 1 23 1017 1039 1017 1039 0.97
25 26 2.8e-06 0.00032 22.0 1.1 1 23 1045 1067 1045 1067 0.99
26 26 7.5e-05 0.0084 17.5 4.8 1 23 1073 1095 1073 1096 0.96

Sequence Information

Coding Sequence
ATGGAAAAACGACGCTATCAGAGAAGTGCGAGAGCTGAAGCGAGATTTATAACAAAGAAGAATGCGACAGCTTTACTTGAATGTTGGTCGTTATGTCCGTTTAGATGGAAAAGGAATAGATTCAAGTGTGCTTACTGTGAAGATAACTTTACTGATTGTTCAGAGTTAAGGGACCATGTCAAATTGTGTTCAATACAGCACAGCGTCAAAGATATATAcagtaaatttaaagaaatgtcTCTGATAAACGTCGATATTACTGAGGCCACCTGTAGAATTTGCGCCATGCCCTTTCAAGGTATTCCCGAAATGCGAAATCACGTAATAGACCACGGCTATGATGTAGATACTGCATATCCAGACGGTGTTCTGCCATTTTGTTTAAACAAGGAATCTTGGAGATGTGTTATATGTCAGGAATCTTTTAATAACTTTCTCAAATTATATGAACATATGAACGTTCATTATCAACATTATATTTGTGCCACTTGCGGTAAAGGCTACATGACAGCGCCGAGATTGCGCAAACATTCTGAAGTTCATATAACTGGAACTTTTCCTTGCGATAAATGTCGACGTGTATTTACAATGCGTGCGGCTAGAGATTACCACAAAGCTCATGCACACGCTAAAGGACCTCGTTATGAGTGTCCACAATGTAATATGAGATTTGGTGGGTACTACGAGAGGATGAATCATTTAAATGAGGCTCATAGAGAGAAAGAAGTTACTTACAAGTGTGCTCATTGCGatttatcatttaaaactaGTGGAAAACGCGCAATTCATGTTAGATCTGTACATTTTCCGCAGCAGCGTAATTTTGCTTGCCCCTTTTGTAAATGGCTGTTTAAAACTGGTTATGAACTGAAAAGACATATGGTTAGACATACAGGGGAGCGAAACTTTTGTTGTACCATATGCGGGAAAACGTTTCCAAGGAATAGAGCGTTAAGGACTCATTTTAAAACGCATGAAGACCTTAGTTGTAAATGGTGTGGAGTTATCTTTAAACAAAAGACACTACTGTTGACTCATCTGCGATCTAATCATCCAGAGATAAGTTCCGCTATTGCGGATTCTGAAGACTTAGTAGTAGGAGTTAAACGCGTTAGAAAATTAAAGGAGAATGTCTGCGCGAGGCAAATGCGTCGTCGACGGCGCGCCAATAACGAACTACCAGAGGAATCTGAGAAAAGAATATCTAAAACAATGATGCGCAGAAATGCAATGACGCTTCTTGAATATTCCACTGCTTGGGCTTTCCGTTGGTTCCAAAGCGCCTTCTTTTGTTCTTATTGTGATGCTAAATACGTTGATCCAGTACTTTTACGTAGCCATGTTCAAACTTTTCATATTGCCGACGCTCCTACGAAACGAATATTCTCAAAACTCACAGAAAATAATATGGTTAAAGTTGATATATCAAACATGCGTTGCAGGCTATGTTTAGAACTCACGTGCAATCAGCATGAAATTGGAAATTTTCCTTGCGGAGAATGTGACGAGATATTGGAAACGAGAGCCGCTAGAATGTGCCACAGATTAAGAATACACAAAAAAGGAGTTCGTTACACATGCCCATATTGCCCTGAAGTATTCACAACTTATTATGCCAGAGCGAAACATTTGGTTGATGAACATAATCAACAAAAGAAAGACTATGAGTGTTCATCTTGCGGAAAGTTATTTGAAACGAGTTgcACAGAAGCCATCAGAACACCAAAAAGTTCAATACAGATAGAATGGAGCAAGAAACGTCCACTTTTAGAAAACAAGGCTAACTCGGCTGTAATATTAGGTTGCTCAAATGCTATAGTATTTCGATGGTCTCGTGGCAAATTTCTTTGTGCTTACTGCCCAGAAATATTTCGAAATGTAGCAGAAATCCAGTACAAATGTGTAATTTGCGACAATATGTTTGAAAGCTACGTAAACTTGTTTAGTCATATGAATGAACATTACCAAAGTTTTGTGTGCTACACATGTGGTAAAGGGTACTCGGCGAAGTATAAACTGCGAGCACATCAGAAATGCCACGAGACCGGTAAAGTGCCATGTTCAAGATGTGACTTGATATTTTTGAATCATGCCATAAAAAACAGGCACGTGGCAACAGTGCATGGATCCAAGAAGAGGTATCGTTGCCCAATATGTGCTATTACATTCGAGTCTTGCCATTCGAGATTGATACATCTTGGCAAAGTGCATGGACAAAAAAGCGAATACCGATGGACAATCACTACGTTTACATGGAAACGGGGACGAAGGCTTTATAACGATCACAGAGATAACGCTGCCACTATTATTCAGTTTTCAAATGTTTGTCCTTTCCGCTGGAAACGCGGAGCTTTCGCTTGCTCTCATTGCCCCCGAACATTTGGAAATTTTAAAGACGTTAGCATTCATATGCAGGAGCATCCCAATCGCCTCGAGGCAATGCGATACGCTCGCCCATATGACaatgtaaaaatagaaataagtaaCCTTCAGTGTGGAATTTGCAATGAAAGTATGAACGGATTAGAGCATCTTAAGGACCATTTGTTCGAAGCTCATCAGAAGTCTATAACCAAAGATTTTAGTCTTGGTGTAACtccttttattttaaaggaCAAAGAAATGCTTTGTACTCATTGTGATGAACGCTTTCTCCTTTTTTCGAGATTAAACAGCCATATGAATCAACATTACCCTAACAACATTTGCCCTCACTGTGGTAAATCTTTCTCCGCCGCTCACCGTCTTAAAGCCCACCAACTTATACATGAAACGAATAACCAAGAGCATAAATGTGCTAAATGTGGCGAAGTATTTGAGACGcggactttaaaaaattatcacatGAACACTAAACATGCTACAGAAAATCGATACAGATGTCCCTATTGTAGAATATCGTTCAAACGTTACTCAGATAGAGTTCGTCACTTGAAGCAATTTCATAACCAAAGCGTAGAATATCCTTGTCATTTATGTACGGCAATATTCGCGATGTCCGACCAAAgaacaaaacatataagaaatgttcatattaaacataaacaatttCAATGTGACTTTTGTCCAAGTAAGTTTGTTACTGCTGGTCAGTTAAAGAGTCATTTGGTGAAGCACAGCGGCGTGAAGGAGTACCAATGCACCGTCTGTAAGAAGAATTACGCGAGAGCTAGGACTTTGAAGGAACATATGAGAATACACAATAATGATAGAAGATTTGTTTGCGAATATTGTAATAATGCGTTCATTCAAAAGTGTAGTCTTAAAAGTCATATTCGAACACATCACCCAAGTGCTGAACCGGTGAAAATTTCGATATAA
Protein Sequence
MEKRRYQRSARAEARFITKKNATALLECWSLCPFRWKRNRFKCAYCEDNFTDCSELRDHVKLCSIQHSVKDIYSKFKEMSLINVDITEATCRICAMPFQGIPEMRNHVIDHGYDVDTAYPDGVLPFCLNKESWRCVICQESFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCRRVFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVTYKCAHCDLSFKTSGKRAIHVRSVHFPQQRNFACPFCKWLFKTGYELKRHMVRHTGERNFCCTICGKTFPRNRALRTHFKTHEDLSCKWCGVIFKQKTLLLTHLRSNHPEISSAIADSEDLVVGVKRVRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFFCSYCDAKYVDPVLLRSHVQTFHIADAPTKRIFSKLTENNMVKVDISNMRCRLCLELTCNQHEIGNFPCGECDEILETRAARMCHRLRIHKKGVRYTCPYCPEVFTTYYARAKHLVDEHNQQKKDYECSSCGKLFETSCTEAIRTPKSSIQIEWSKKRPLLENKANSAVILGCSNAIVFRWSRGKFLCAYCPEIFRNVAEIQYKCVICDNMFESYVNLFSHMNEHYQSFVCYTCGKGYSAKYKLRAHQKCHETGKVPCSRCDLIFLNHAIKNRHVATVHGSKKRYRCPICAITFESCHSRLIHLGKVHGQKSEYRWTITTFTWKRGRRLYNDHRDNAATIIQFSNVCPFRWKRGAFACSHCPRTFGNFKDVSIHMQEHPNRLEAMRYARPYDNVKIEISNLQCGICNESMNGLEHLKDHLFEAHQKSITKDFSLGVTPFILKDKEMLCTHCDERFLLFSRLNSHMNQHYPNNICPHCGKSFSAAHRLKAHQLIHETNNQEHKCAKCGEVFETRTLKNYHMNTKHATENRYRCPYCRISFKRYSDRVRHLKQFHNQSVEYPCHLCTAIFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKSHLVKHSGVKEYQCTVCKKNYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPSAEPVKISI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00160039;
90% Identity
-
80% Identity
-