Basic Information

Insect: Brenthis daphne
Gene Symbol: -
Assembly: GCA_947093115.1
Location: OX352471.1:51420393-51425261[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.075 5.7 8.0 0.8 1 21 48 68 48 69 0.96

2 27 0.68 52 5.0 0.3 3 23 98 118 97 118 0.95

3 27 0.0043 0.33 11.9 0.3 2 23 141 162 140 162 0.97

4 27 0.017 1.3 10.0 0.1 1 23 166 188 166 188 0.95

5 27 0.48 37 5.4 0.8 1 15 193 207 193 216 0.78

6 27 0.049 3.8 8.6 0.2 1 23 222 245 222 245 0.94

7 27 0.002 0.15 12.9 1.2 1 23 252 275 252 275 0.98

8 27 1.7e-05 0.0013 19.4 0.7 1 23 282 304 282 304 0.97

9 27 3.1e-06 0.00023 21.8 2.3 1 23 310 332 310 332 0.97

10 27 8.7e-05 0.0066 17.2 0.2 2 23 336 358 335 358 0.96

11 27 1.4e-05 0.0011 19.7 0.6 1 23 435 458 435 458 0.98

12 27 0.00062 0.047 14.5 0.2 1 21 497 517 497 520 0.90

13 27 6.3 4.8e+02 1.9 2.0 1 13 527 539 527 540 0.89

14 27 2.4 1.8e+02 3.3 1.1 1 19 587 605 587 609 0.85

15 27 0.036 2.7 9.0 0.5 2 23 634 656 633 656 0.93

16 27 0.00096 0.073 13.9 0.7 1 23 678 700 678 700 0.99

17 27 8e-05 0.0061 17.3 1.1 1 23 704 726 704 726 0.98

18 27 0.21 16 6.6 1.1 1 23 760 783 760 783 0.92

19 27 0.0026 0.2 12.6 1.2 1 23 827 849 827 849 0.96

20 27 0.92 70 4.6 3.0 3 23 919 939 918 939 0.97

21 27 0.00081 0.062 14.2 2.3 3 23 945 965 944 965 0.97

22 27 0.0068 0.52 11.3 2.7 1 23 972 995 972 995 0.97

23 27 0.00015 0.011 16.5 2.9 1 23 1001 1024 1001 1024 0.97

24 27 0.0071 0.54 11.2 0.4 1 23 1030 1053 1030 1053 0.97

25 27 0.00038 0.029 15.2 0.5 1 23 1059 1081 1059 1081 0.97

26 27 2.6e-06 0.0002 22.0 0.8 1 23 1087 1109 1087 1109 0.99

27 27 7.3e-05 0.0056 17.5 4.8 1 23 1115 1137 1115 1138 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.075	5.7	8.0	0.8	1	21	48	68	48	69	0.96
2	27	0.68	52	5.0	0.3	3	23	98	118	97	118	0.95
3	27	0.0043	0.33	11.9	0.3	2	23	141	162	140	162	0.97
4	27	0.017	1.3	10.0	0.1	1	23	166	188	166	188	0.95
5	27	0.48	37	5.4	0.8	1	15	193	207	193	216	0.78
6	27	0.049	3.8	8.6	0.2	1	23	222	245	222	245	0.94
7	27	0.002	0.15	12.9	1.2	1	23	252	275	252	275	0.98
8	27	1.7e-05	0.0013	19.4	0.7	1	23	282	304	282	304	0.97
9	27	3.1e-06	0.00023	21.8	2.3	1	23	310	332	310	332	0.97
10	27	8.7e-05	0.0066	17.2	0.2	2	23	336	358	335	358	0.96
11	27	1.4e-05	0.0011	19.7	0.6	1	23	435	458	435	458	0.98
12	27	0.00062	0.047	14.5	0.2	1	21	497	517	497	520	0.90
13	27	6.3	4.8e+02	1.9	2.0	1	13	527	539	527	540	0.89
14	27	2.4	1.8e+02	3.3	1.1	1	19	587	605	587	609	0.85
15	27	0.036	2.7	9.0	0.5	2	23	634	656	633	656	0.93
16	27	0.00096	0.073	13.9	0.7	1	23	678	700	678	700	0.99
17	27	8e-05	0.0061	17.3	1.1	1	23	704	726	704	726	0.98
18	27	0.21	16	6.6	1.1	1	23	760	783	760	783	0.92
19	27	0.0026	0.2	12.6	1.2	1	23	827	849	827	849	0.96
20	27	0.92	70	4.6	3.0	3	23	919	939	918	939	0.97
21	27	0.00081	0.062	14.2	2.3	3	23	945	965	944	965	0.97
22	27	0.0068	0.52	11.3	2.7	1	23	972	995	972	995	0.97
23	27	0.00015	0.011	16.5	2.9	1	23	1001	1024	1001	1024	0.97
24	27	0.0071	0.54	11.2	0.4	1	23	1030	1053	1030	1053	0.97
25	27	0.00038	0.029	15.2	0.5	1	23	1059	1081	1059	1081	0.97
26	27	2.6e-06	0.0002	22.0	0.8	1	23	1087	1109	1087	1109	0.99
27	27	7.3e-05	0.0056	17.5	4.8	1	23	1115	1137	1115	1138	0.96

Sequence Information

Coding Sequence: ATGGACGGTAATTCAAAAGTGACTGAAAAACGAGGTTATCAAAGAAGTGCCAGAGCTGAAGCCAGATTTATGACAAAGAAGAATGCCAGTGCTATACTTGAATGTTGGTCTTTATGTCCATTTAGATGGAAAAGGAATAGATTTAAATGCGCTTACTGTGAAGATGATTTCACTGAATGCTCAGAGCTTCGGTCTCACGTTAGACTTTGCTCGACCCAACACAGTGTTAAAGATATTTACAGTAAATTCAAAGAAATGTCACTCATAAACGTTGACATTACTGAAGCCATATGCAGAATTTGCGCCATGCCATTTCAAGATGTATCAGATATGAAGCACCACGTAATAAACCATGGTTATGACTTAGACTCCTCCTATCCCGATGGTGTTCTACCATTTTGTTTGGACAAAGAGTCGTGGAGATGTGTAATATGTCAAGAATCGTTCAATAACTTCCTCAAACTGTATGAACATATGAATATACATTACCAGCACTACATTTGTGCGACTTGCGGAAAAGGGTACATGACAGCGCCTCGATTACGTAAACATTCTGAAGTCCATATAACGGGCACCTTTCCATGTAATAAGTGTAGGCGAGTATTCACTATGCGTGCGGCCAGAGATTACCACAAAGCCCACGCCCACGCAAAAGGCCCTCGTTACGAATGTCCACAATGTAATATGAGATTTGGAGGCTATTATGAAAGGATGAATCATTTGAATGAAGCTCATAGAGAAAAGGAGGTTTCTTATAAATGTGCTCACTGTGAATTATCTTTCAAAACTAGTGGAAAGCGGGCAATCCATGTACGGTCGATACATTTTCCTCAACAGCGCAATTTTCCTTGCCCATTTTGTAAATGGTTGTTTAAAACTGCCTACGAATTAAAAAGGCACATGGTGAAACATACGGGTGAAAGAAATTTTTGTTGTGCGGTATGTGGAAAGACCTTCCCAAGGAATAGAGCACTGAAAACTCATCTCAAAACTCATGAAGATCTTAGTTGTAATTGGTGCGGTGTCATTTTTAAACAAAAAGCCCTATTAGTAACACATTTACGCTCAAACCATCCGGAGATAAGTTCCGCTATTGCGGACTCTGAAGATGTAGTGGTAGTAAGACGCGTTAGAAAGTTAAAGGAGAACGTTTGCGCGCGGCAGATGCGTCGGCGGCGGCGTGCCAACAACGAGCTCCCAGAGGAATCTGAGAAGCGAATATCAAAAACGATGATGCGTCGAAATGCTATGACGCTTCTAGAATATTCTACAGCTTGGGCTTTTCGATGGTTCCAAAGCGCTTTCTATTGTTCCTATTGTGATACTAAATTTGTTGATCCAGTACTCTTGAGAGATCACGTTCGGACTTTTCATATTATTGAAtcacatgaagtcggtagtttcccttgtggggagtgTAAGGAGGTACTAGAAACTAGGGCTGCTAGAATGTGCCACAGATTAAGGATACATAAAAAAGGCATTCGATATACATGCCCATATTGCCCTGAAGTATTCACAACTTATTATGCCAGAGCTAAACATTTAGTAGATGGACATGATCAGCAAAAAAGAGATTATGAGTGTTCATCTTGCGGGAAATTGTTTGAGACAAGTTGCCCAGAAGTGCTGGAAACAACAAAAAGGTCAATAAAGATTGAGTGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCGAATTCTGCCCTAATATTAGATTGCTCCAACGCTATAGTATTTCGTTGGTCGCGTGGAAAATTTCTTTGCGCTTATTGCCCAGAAACGTTTCAAAATGTGAAGGAAATCCGCACACATTGTGATATACATGAAAAACTTACAGTCCTACAGAAACCGGAAGTTCGCAATTCCTTTCCTCTTAAAATAGACATCACAGATCTAAAATGCAAGCTGTGTGATAACAACTTGAAGAATTTGACAGACCTCAAAAACCATTTGGTTGTATCGCACGATAAAAAATTTGACGCAAATTATGATGATGGTGTTATTCCTTTCGTATTAACTGGTTCAGAGTACAGATGTGTTATTTGCGATAATTTATTTGAAAGCTACGTGAACTTGTTTAGTCACATGAATAAGCATTACCAAAGTTTTGTTTGCTATACATGTGGGAAAGGATACTCGGCAAAATATAAGCTTCGGGCACACCAGAAAAGTCACGAAACTGGCAAAGTGCCATGTTCAAGATGTGACATGGTGTTTTTAAACCATGTCATTAAAAATCGACATGTTGCCACTGTTCATGGTTCGAAAAAACGTTATCGCTGCCCAATTTGCGCCATGGCATTCGAGTCTTGTCATTCTCGACTGATTCACCTTGGTAAAATACATGGACAGAAAAGAACGGTCAAGACATTTATGTGGAAAAGGAAACGAAGGCTTTATAATGACCAAAGAGATAATGCGGCGACTCTAATAGAGTTTTCAAACGTTTGTCCTTTTCGCTGGAAACGCGGAGCATTTGCGTGTTCCCATTGTCCAAGAACATTCGGCAATTTTAAAGATGTTAGCGATCATATGCAGGAGCATCCCAATCGCCTCGAGGCAATGCGATACGCGCGACCCTACGATAATGTAAAGATTGAAATAAGTAATCTTCGATGTGAAATCTGCCAGCAAAATATGAATGGCATAGAACATCTTATAGACCATTTATTTGAAGTTCACCAAAAGCCAATCGTGAAAGATATAGGACTTGGCGTAACTCCATTTATTTTAAGGGACAAGGAAATGCTTTGCACTCATTGCGACGAACGATTCTTATTGTTTTCGAGACTCAACAGCCACATGAACCAACATTACCCTAACAATATTTGCTCCCATTGTGGTAAATCTTTCTCTGCTGTCCACCGCCTAAAAGCTCATCAGTTGATCCACGAATCAAACGATCAAGAACATAAATGCACTAAATGCGACGAAATATTCGAGACGAGAGCATTAAAAAATTATCACATAAACACAAAACATGCTGCAGAAAATCGATACAGATGTCCGTACTGTAAAATATCCTTCAAACGCTATTCCGACAGAGTGAGACATCTGAAACAATTTCACAATCAGATCGTCGAATATCCTTGCCATTTGTGCGCAGCGGTTTTTGCAATGTCCGATCAAAGAACGAAGCATATAAGAAACGTTCATATTAAACATAAACAGTTCCAATGCGACTTCTGCCCAAGCAAGTTTGTCACAGCTGGACAGTTAAAGAATCATTTGGTGAAGCACAGTGGCCTTAAGGAGTACCAGTGTGACGTGTGTAAGAAGAACTACGCGAGGGCTCGAACGTTAAAAGAACATATGAGAATACACAATAATGATAGACGATTTGTCTGCGAATATTGCAATAATGCGTTCATTCAAAAGTGCAGTCTTAAAAGTCATATCCGAACACATCATCCAAACGCGGAATCTGTGAAAATTTCAATTTAG
Protein Sequence: MDGNSKVTEKRGYQRSARAEARFMTKKNASAILECWSLCPFRWKRNRFKCAYCEDDFTECSELRSHVRLCSTQHSVKDIYSKFKEMSLINVDITEAICRICAMPFQDVSDMKHHVINHGYDLDSSYPDGVLPFCLDKESWRCVICQESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCNKCRRVFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCELSFKTSGKRAIHVRSIHFPQQRNFPCPFCKWLFKTAYELKRHMVKHTGERNFCCAVCGKTFPRNRALKTHLKTHEDLSCNWCGVIFKQKALLVTHLRSNHPEISSAIADSEDVVVVRRVRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFQSAFYCSYCDTKFVDPVLLRDHVRTFHIIESHEVGSFPCGECKEVLETRAARMCHRLRIHKKGIRYTCPYCPEVFTTYYARAKHLVDGHDQQKRDYECSSCGKLFETSCPEVLETTKRSIKIEWRKKRPFLENKANSALILDCSNAIVFRWSRGKFLCAYCPETFQNVKEIRTHCDIHEKLTVLQKPEVRNSFPLKIDITDLKCKLCDNNLKNLTDLKNHLVVSHDKKFDANYDDGVIPFVLTGSEYRCVICDNLFESYVNLFSHMNKHYQSFVCYTCGKGYSAKYKLRAHQKSHETGKVPCSRCDMVFLNHVIKNRHVATVHGSKKRYRCPICAMAFESCHSRLIHLGKIHGQKRTVKTFMWKRKRRLYNDQRDNAATLIEFSNVCPFRWKRGAFACSHCPRTFGNFKDVSDHMQEHPNRLEAMRYARPYDNVKIEISNLRCEICQQNMNGIEHLIDHLFEVHQKPIVKDIGLGVTPFILRDKEMLCTHCDERFLLFSRLNSHMNQHYPNNICSHCGKSFSAVHRLKAHQLIHESNDQEHKCTKCDEIFETRALKNYHINTKHAAENRYRCPYCKISFKRYSDRVRHLKQFHNQIVEYPCHLCAAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKNHLVKHSGLKEYQCDVCKKNYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPNAESVKISI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00160039;
90% Identity: iTF_00248310;
80% Identity: -