Aash005680.1
Basic Information
- Insect
- Aphaenogaster ashmeadi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003063805.1
- Location
- NJRQ01000038.1:700708-709159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-18 6.8e-15 55.0 0.1 1 45 35 80 35 80 0.96 2 2 1.4e-17 1.2e-14 54.1 0.0 1 43 471 514 471 516 0.95
Sequence Information
- Coding Sequence
- ATGACCGGACCGGTTGTgaccgcggcggcggcggcggcggcggctgcggCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGTGGCAGGAGGACTTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCAGCGGTGATCTACGGGATACCGCGTAGCACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccaccactactactactacaACACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCAACTTGGTGTCCGCGAGGTTGCAAGATTCGAGGTGGACGACAAAGAGCTCTCCGGTGCGGAAGAAGAGAAGGAAGTCGAGAAGGCTCTGCTGAAGCCTCTGCTCTCGTTGGAGGACCTCGTAAGGTTTTCCACGCTCGAGGGGACCGGTGGTGATTCCCTCAGGAACCTGCTGCAACGAGGACACGAGACAGGAGCCGAATGGCCGGGACTGGAACACGCGAACATCGGTCCTTATATTCAGAAAATGTTAGCTGCCGCTGCACCATTAGGTATGGATACGCGAGACTATCGCATACCCGAAGTGATGAGGAAGCTGATGAGCGAAGACAAGAGGCTGAACAAGAACGTGAACGGAGACCAGTCGCAGCCGCATCATCATCAGCACCATCTCCTCGCCGCGCATCAGCAgtcgcagcagcagcagcagcgcgTGCCCATGACGAACGACGACTTCAATCCCAACATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAAAGCTTCGCGACTGCCGCCTCGAGTCCGGGCCTCCTGGAGCGAGCTAGTCCAGCGTTCTCCGGCACCAGCAGCCCCACGAATTCGCTGGTAGGCAAAGCGGTGGCTGCCGTCAATTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGCCAGACGCCCGGTGCGGCCGGCATACCGGGCTGCCAACCGGCCGGCGTTCCATCGCAACAGGCCATGATGACAGACCCGAGTCCGTTCAAGAGGGGTCGTTATACACCCCCGCAACCGCAGCAACAGCAATCGTCGACGCAGCAACAGCAATCTAAACAGCAGTCGCAGGAGGCGAACAAATCGAAACCGGGTACCGGCGGCAAGGGCACCAGACCTAAGCGCGGCAAGTACAGGAACTACGACAGAGACAGCCTCGTCGAGGCGGTACGTGCAGTTCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAATCGAAGGAGACCGCGAcgacggcagcggcggcggcggcagctgCGGCGATGCGGCCGGGTACTGCTGGCGTCGATAAGAAGCCGCAGCTGAAGCCGCAGAAACCGTTCACACCGCCCGGCGGTATACCCGGTCCAAACGGACTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGGGCCTTTCAACTTTTGGAACCCGACGCCCTTCATGCCCTCCCCTTTTATGGGTGGCGCGCCGAACGTGCCGATTCTTCCGGAACAATACTTTGCGTCGCAGAGAATGCGCGGACTGCAGGAGCAACAACGAAACGCCACGATGGTACAGCAGCAGCATCAGCAACGAGATCGAGACGGGGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGGCGAAGGCACCGCGCGACATGGTGGAGAGCATCTACGACGGGCCCGGGGCGAACGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTTGAGACAGGCATTCCAAGGGACCAGCGGGCGTTAGGGGAGGCGAGAAGCCAGCAGCAGTCGTCGTCGCAACATCCGGAGACGATGAGCAGCAAGACTCTGATCGACCAGCTTTGCAGAAACTCGAGAAGAACCCCGCTGCCGCGGATGGCGCAAGATAGCAGCGAGGATGAGAGTTATCGAGGACCAACGGGCAGGATAGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTCGATCTCAGCCCCTCACCATCAGAGAGGGGTCGCACGGAGGACGGCAGCGATCGGCTGACGTCACCGCCGACGCCTCTGTCGATCTCCCGAGCGGGTAGCAGGGACGAGGACAGCACCCGTGACTCGAGGATCGATCGCAGTAGCAGAGAGCGCGAGGTTCACAACGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGCctgcaacagcagcagcagcaaccaCAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGATCCGGCGAGCCGACTAACAGCCAGcagccggcggcggcggagcaGCGCGGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MTGPVVTAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPNTTQNASATTPPPQVDEFNTRQLGVREVARFEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGTGGDSLRNLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPLGMDTRDYRIPEVMRKLMSEDKRLNKNVNGDQSQPHHHQHHLLAAHQQSQQQQQRVPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFATAASSPGLLERASPAFSGTSSPTNSLVGKAVAAVNFRDVIAKSISVKFQEGQTPGAAGIPGCQPAGVPSQQAMMTDPSPFKRGRYTPPQPQQQQSSTQQQQSKQQSQEANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDGVGVSGTADAAGTSNSRSASMAKAPRDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRALGEARSQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAEQRGTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423554; iTF_00868681; iTF_01267465; iTF_01228938; iTF_00867308; iTF_01245135; iTF_00280538; iTF_00729210; iTF_00182544; iTF_00765457; iTF_01266801; iTF_01407156; iTF_01408983; iTF_01408081; iTF_00868027; iTF_00264188;
- 90% Identity
- iTF_00182544;
- 80% Identity
- -