Pcub007454.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014825685.1
- Location
- QVOA01006854.1:40581-46710[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-17 1e-14 54.3 0.0 1 43 371 414 371 416 0.95
Sequence Information
- Coding Sequence
- ATGACCGATTACAACGCAGAGGAACGCGGAAGGATGGGAAACCGAACGATGCACAAGGGAGATTTCTCGGCGGGAGAATTCGCGCGCGAATACATACCGTCCATTTTGTACCTAAGTGTGGTTTTGGTGGACGACAAAGAACTATCCGGCGCGGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTGAAACCTTTGCTGTCGTTGGAGGATCTCGTGAGGTTCTCCGCGCTCGAAGGAACCGGCAGCGATTCCCTTAGGAACCTGCTGCAACGGGGTCACGAGGCGGGAACCGAATGGCCGGGATTGGAACACCCGAACATCGGTCCTTACATTCAGAAGATGTTGGCTGCCGCCGCACCAATGGGCTTAGAGACGCCGAACTATCGCATACCGGACGTGGTGAGAAAGCTGATGACCGAAGACAAGAGGCTGAACAAAAATGTGAACGGTGATCAGTCGCAACCGCATCAACAGCATCATCATCAGCAACACCATCCTCTCGCGGCGCATCAGACGCAGTCACAGCAACAGCGTACGTCCCTGTCGAACGACGACTTCAATCCTAACATCGAGGAGGAGGCCAGCGACAGTGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGTACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCATTTGCTCAGGGCTTCGCGACTGCAGCCTCGAGTCCGAGTCTTTTAGAGCGAGCCAGTCCAGCGTTCTCCGGCACCAGCAGCCCTACAAACTCACTGGTTGGCAAAGCGGTAGCCGTTAACTTCCGCGACGTTATTGCCAAGAGCATAAGCGTTAAGTTCCAAGAGGGCCAGACGCCTGGCGCGGCTGGCATGCCAAGTTGCCAACCGGCCGGCGTTGTTCCACCTCAGCAGGTTGGCAGCATGTTGACCGATCCGAGTCCGTTCAAAAGGGGCCGTTATACGCCCCCGCAACCGCCACAACAGCAACCGCCGCAGCAACAATCGCAACAGCAGCAGTCTAAACAACAGGCGCAGGATGCGAATAAACCGAAGCCGGGTACAGGCGGCAAGGGCACCAGGCCGAAACGCGGCAAGTACAGAAACTACGACAGGGACAGCCTCGTCGAGGCGGTGCGCGCGGTCCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAAGAGACAGCGACGACGGCGACGACCGCGGCTGCGGCGATGCGACCGAGTGCTGCTGGCGTTGACAAGAAACCGCAGCTGAAACCGCAAAAGCCTTTCACGCCGCCGGGCGGCATACCTGGTCCAAACGGATTGAAAATGTCACCGTTCATGGAGGGTATGCCCCACCTGCCGTTCGGGCCCTTTAACTTCTGGAACCCGACGCCCTTCATGCCCGCCCCGTTTATGGGTGGCGCACCGAACGTGCCGATTCTGCCAGAACAATATTTCGCGTCGCAGAGAATGCGCGGATTGCAAGAACAACAACGAAACGCGGCGATAGTGCAGCAGCAACATCAGCCACGAGACCGAGACGGAGTCGGCGTATCCGGAACGGCGGACGCGGCTGGCACTTCGAACTCCCGAAGTGCATCGATGTCGAAAGTGACGCGCGAAATAGCAGAGATCTACGATACGCCCGGGGCGAACGGCAGTTTTCTGGACAATCTGATCAGGTCGAGCCTTGAGACGGGCATTCCAAGGGACCAGCGGGCGATGGCGGAGGCGAGAACCCAGCAGTCGTCGTCGTCGCAGCAGCAACACCCGGAAACGATGAGCAGCAAAGCGCTGATCGACCAGCTCTGCAGAAACTCGAGGAGAACTCCGCTGCCGCGAATAGCGCAGGATAGCAGCGAGGACGAAAGTTATCGAGGACCAGCGGGCAGGATAGTGCCTGAGAGGCCAGAGCGCGTGCCCACGGTCGATCTTAGCCCGTCGCCCTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCACCAACACCCTTGTCCATCACCCGTGCGGGCAGCAGGGATGAGGATAGCACCCGTGACTCGCGCAGCAGCAGAGAGCGCGAGGTTCACAACGGCCAGGAGGATCGTGATCGGAAGCAGCCTTTGAACCTGCAGCAGCAACCGACACAGCTGACTAACCACTACCCAGACATACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAGTACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGACCCGGCGAATCGACTAACAGCCAGCAGCCGGCGTCGGAGCAACGCGGCCCCACGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MTDYNAEERGRMGNRTMHKGDFSAGEFAREYIPSILYLSVVLVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGSDSLRNLLQRGHEAGTEWPGLEHPNIGPYIQKMLAAAAPMGLETPNYRIPDVVRKLMTEDKRLNKNVNGDQSQPHQQHHHQQHHPLAAHQTQSQQQRTSLSNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPSLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPSCQPAGVVPPQQVGSMLTDPSPFKRGRYTPPQPPQQQPPQQQSQQQQSKQQAQDANKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTATTAAAAMRPSAAGVDKKPQLKPQKPFTPPGGIPGPNGLKMSPFMEGMPHLPFGPFNFWNPTPFMPAPFMGGAPNVPILPEQYFASQRMRGLQEQQRNAAIVQQQHQPRDRDGVGVSGTADAAGTSNSRSASMSKVTREIAEIYDTPGANGSFLDNLIRSSLETGIPRDQRAMAEARTQQSSSSQQQHPETMSSKALIDQLCRNSRRTPLPRIAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSITRAGSRDEDSTRDSRSSREREVHNGQEDRDRKQPLNLQQQPTQLTNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRPGESTNSQQPASEQRGPTLSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125824;
- 90% Identity
- iTF_01271112; iTF_01266801;
- 80% Identity
- -