Fase006319.2
Basic Information
- Insect
- Formica aserva
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037039905.1
- Location
- JAXRKO010000004.1:9820032-9827526[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-18 1.4e-14 54.9 0.1 1 45 35 80 35 80 0.96 2 2 9e-18 2.6e-14 54.1 0.0 1 43 478 521 478 523 0.95
Sequence Information
- Coding Sequence
- ATGACCGGACCAGTTGCGgccgcggcggcggcggcggcggcagctGCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGTGGCAGGAGGACTTACACCGAGGAGGAACTGCAGGCCGCTCTTAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCGCGTAGCACGCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCagccaccaccaccaccaccatcaccaccaccaccaccaccactactactactactactacaaCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACATGGCAACTTGGTGTCCGCGAGGTTGCAAGACTCGAGGTGGACGACAAAGAATTATCCGGCGCGGaagaagagaaggaagtcgAGAAGGCCCTGTTGAAGCCTCTGCTTTCGTTGGAGGATCTCGTCAGGTTCTCTGCGTTCGAAGGTACCGGTGGTGATTCCCTCAGGAACCTGTTACAACGGGGACACGAGACAGGAACTGAATGGCCGGGATTGGAACACGCCAACATTGGTCCTTACATTCAGAAGATGTTGGCTGCTGCTGTGCCATTagGACTGGACACACGAGACTATCGCATACCGGAAGTGGTGAGGAAGCTGATGAGCGAAGATAAGAGGCTGAACAAGAATGTGAACGGCGATCAATCGCAGTCGCATCATCAGCACCATCACCATCCCTTAGCTGCGCATCAGCAGACGCAGTCGCAGCAGCAGCGCGTACCCATGACGAACGACGACTTCAATCCCAACATCGAGGAGGAGGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCTAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAGGGTTTCGCGGCTGCCGCCTCGAGTCCGGGTCTTCTGGAGCGAGCTAGCCCAGCCTTCTCCGGCACCAGTAGCCCCACGAATTCGCTGGTGGGCAAAGCGGTGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGTGTTAAATTTCAAGAAGGCCAAACACCCGGCGCGGCCGGTATGCCGGGTTGCCAATCGGCCGGCGTCGTTCCGTCGCAGCAGGCCATGATGACGGACCCGAACCCGTTCAAGAGGGGTCGTTACACGCCCCCGCAACCGccgcagcaacagcagcagcaacagccgTCGtcgcagcaacagcagcaggcCAAGCAGCAGTCGCAAGACGCGAACAAGTCGAAGCAGGGCACCGGAGGCAAGGGTACCAGACCGAAACGCGGCAAGTACAGGAACTACGATAGGGATAGTCTCGTCGAGGCGGTACGCGCGGTACAGCGCGGTGAGATGAGCGTGCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCAGACGACAAATCGAAGGAGACCGCGACGACGGCAGCGGCAGCGGCGGCCGCGGTGATGCGGCCAGGCGCTGCCGGCGTCGACAAGAAACCGCAGTTGAAACCGCAGCAGAAGCCGTTTACGCCGCCGGGTGGCATACCCGGTCCGAACGGACTGAAAATGCCTCCGTTCATGGAGGGCATGCCTCCTCACTTGCCGTTCGCGGCCTTCAACTTCTGGAACCCGGGACCCTTCATGCCCTCGCCCTTTATGGGTGGCGGACCGAACGTGCCGATCCTGCCGGAACAATACTTTGCGGCATCGCAGAGAATACGCGGGCTGCAGGAACAACAACGAAACGCGGCGATGGTACAACAACAGCACCAGCAACGAGACCGTGACGGCGGTGTTGGCGTATCCGGAACGCCAGACGCAGCTGGAACCTCGAATTCTCGAAGCGCGTCGATGGCGAAGGCGCCGCGCGACGTGGTAGAAAGTATCTATGACGGGTCTGGGGCGAACGGCAGTTTCTTGGACAATCTGATCAGGTCGAGCCTCGAGACAGGCATACCACCAAGGGACCAGCGTACGATGGCGGAAGTGAGGAACCAGCAGCAGCAATCGTCGTCGCAAGCGCAACATCCGGAGACGATGAGTAGTAAGACGTTGATCGATCAGCTTTGCAGAAATTCGAGAAGAACTCCGCTGCCTCGGATAGCGCAAGATAGCAGTGAGGATGAGAGTTATCGAGGACCAGCGGGCAGGATAGTGCCGGAAAGGCCGGAGCGTGTGCCTACGGTTGATCTCAGCCCATCACCATCGGAGAGGGGTCGTACGGAGGACGGCAGCGATCGGCTCACGTCACCACCGACGCCTCTGTCGATTTCTCGAGCAGGTAGCAGGGACGAGGATAGCACCCGTGACTCGAGGATCGATCGCAGCAGCAGAGAGCGCGAAGTTCATAACGGCGGCCAGGAGGATCGCGATAGGAAGCAGCCTTTGAGCctgcaacagcagcagcaaccaCAGCTGAACCATTACCCGGACTTACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAACAGATCCGGCGAGTCGACTAACAGCCAACAGCCGGCGGCGGAGCAACGTGGCCCCGCGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MTGPVAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTPNTTQNASATTPPPQVDEFNTWQLGVREVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSAFEGTGGDSLRNLLQRGHETGTEWPGLEHANIGPYIQKMLAAAVPLGLDTRDYRIPEVVRKLMSEDKRLNKNVNGDQSQSHHQHHHHPLAAHQQTQSQQQRVPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAASSPGLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPGCQSAGVVPSQQAMMTDPNPFKRGRYTPPQPPQQQQQQQPSSQQQQQAKQQSQDANKSKQGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAVMRPGAAGVDKKPQLKPQQKPFTPPGGIPGPNGLKMPPFMEGMPPHLPFAAFNFWNPGPFMPSPFMGGGPNVPILPEQYFAASQRIRGLQEQQRNAAMVQQQHQQRDRDGGVGVSGTPDAAGTSNSRSASMAKAPRDVVESIYDGSGANGSFLDNLIRSSLETGIPPRDQRTMAEVRNQQQQSSSQAQHPETMSSKTLIDQLCRNSRRTPLPRIAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQPQLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASNRSGESTNSQQPAAEQRGPALSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125824;
- 90% Identity
- iTF_00264188;
- 80% Identity
- -