Lnig003901.1
Basic Information
- Insect
- Lasius niger
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001045655.1
- Location
- LBMM01004879.1:13-12013[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-18 4.9e-15 55.0 0.1 1 45 35 80 35 80 0.96 2 2 8.3e-18 8.8e-15 54.2 0.0 1 43 464 507 464 509 0.95
Sequence Information
- Coding Sequence
- ATGACCGGACCGGTTGCggccgcggcggcggcggcggcggcagctgCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGTGGCAGGAGGACTTACACCGAGGAGGAGCTGCAGGCCGCCCTTAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCGCGTAGCACGCTGCGGAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccactactactactactacaaCTACTACACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGgTGGACGACAAAGAATTATCCGGCGcggaagaggagaaggaagtCGAGAAAGCCCTGCTGAAGCCTCTGCTCTCGTTGGAGGATCTCGTCAGGTTCTCCGCGTTCGAGGGAACCGGTGGTGATTCCCTCAGGAACCTGCTACAACGGGGACACGAGACAGGAACTGAATGGCCGGGATTGGAACACGCCAACATCGGTCCTTACATTCAGAAGATGTTGGCTGCCGCTGCGCCATTAGGACTGGACACGCGAGACTATCGCATACCGGAAGTGGTGAGGAAGCTGATGAGCGAAGATAAGAGGCTGAACAAGAATGTGAACGGCGACCAGTCGCAGCCGCACCATCAGCACCATCACCATCAGCAGCACCATCCCCTAGCTGCGCATCAGCAGGCGCAGTCGCAGCAACAGCGCGTACCCATAACGAACGACGACTTCAATCCCAACATCGAGGAGGAGGCCAGCGATAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAGGGCTTCGCGGCTGCCGCCTCGAGTCCGGGCCTTCTGGAGCGAGCTAGCCCAGCGTTCTCCGGCACCAGCAGCCCTACGAATTCGCTGGTGGGCAAAGCGGTGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAGGAGGGCCAAACGCCCGGCGCGGCCGGTATGCCAGGTTGCCAATCGGCCGTTCCGTCGCAGCAGGCTATGATGACGGACCCGAGCCCGTTCAAGAGGGGTCGTTACACGCCCCCGCAACCAccgcaacagcagcaacagccgccgtcgtcgcagcagcagcaagccAAGCAGCAGACGCAAGACGCGAACAAGTCGAAGCCGGGCACCGGCGGCAAGGGTACCAGACCGAAACGCGGCAAGTACAGGAACTACGACAGGGATAGCCTCGTCGAGGCGGTACGCGCGGTACAGCGCGGCGAGATGAGCGTGCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCGGACGACAAATCGAAGGAGACCGCGACGACGgcagcggcagcggcggcCGCGGCGATGCGGCCAGGCGCTACCGGCGTCGACAAGAAACCGCAGCTGAAACCGCAGAAGCCGTTTACGCCGCCGGGCGGCATACCTGGTCCGAACGGACTGAAAATGCCTCCGTTCATGGAGGGCATGCCTCACCTGCCGTTCGCGCCCTTCAACTTCTGGAACCCGGGACCCTTCATGCCCTCGCCCTTCATGGGTGGCGCACCTAACGTGCCGATTCTGCCGGAACAATACTTTGCGTCGCAGAGAATGCGCGGGCTGCAGGAGCAACAACGAAACGCGGCGATGGTACAGCAACAGCACCAGCAACGAGACGGCAGCGTTAGCGTATCCGGAACGCCAGACGCAGCCGGAACCTCGAACTCTCGAAGCGCGTCGATAGCGAAGGCGCCGCGCGACATGGTGGAAAGCATCTACGACGGGTCCGGGGCGAACGGCAGTTTCTTGGACAATCTGATCAGGTCGAGCCTCGAGACAGGCATACCAAGGGACCAGCGGACGATGGCGGAGGTGAGGAGCCAGCAGCAACAGTCATCGTCGCAGGCGCAACATCCGGAAACGATGAGCAGCAAGACGTTGATCGACCAGCTTTGCAGAAATTCGAGGAGAACTCCGCTGCCGCGGATGGCGCAAGACAGCAGCGAGGACGAGAGTTATCGAGGACCAGCGGGCAGGATAGTGCCGGAAAGGCCGGAGCGTGTGCCTACGGTTGATCTCAGCCCATCACCATCGGAGAGGGGTCGCACGGAGGACGGCAGCGATCGGCTCACGTCACCACCGACGCCTCTGTCGATCTCCCGAGCGGGTAGCAGGGACGAGGATAGCACCCGTGACTCGAGGATCGATCGCAGCAGCAGAGAGCGCGAAGTTCACAACGGCGGCCAGGAGGATCGCGATAGGAAGCAGCCTTTGAGCctgcaacagcagcagcaaccaCAGCTGAACCATTACCCGGACTTACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATACGCTGCTGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGATCCGGCGAGCCGACTAACAGCCAACAGCCGGCGGCGGAGCAACGTGGCCCCGCGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MTGPVAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTTTPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSAFEGTGGDSLRNLLQRGHETGTEWPGLEHANIGPYIQKMLAAAAPLGLDTRDYRIPEVVRKLMSEDKRLNKNVNGDQSQPHHQHHHHQQHHPLAAHQQAQSQQQRVPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAASSPGLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPGCQSAVPSQQAMMTDPSPFKRGRYTPPQPPQQQQQPPSSQQQQAKQQTQDANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAMRPGATGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFAPFNFWNPGPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNAAMVQQQHQQRDGSVSVSGTPDAAGTSNSRSASIAKAPRDMVESIYDGSGANGSFLDNLIRSSLETGIPRDQRTMAEVRSQQQQSSSQAQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQPQLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAEQRGPALSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125824;
- 90% Identity
- iTF_00182544;
- 80% Identity
- -