Cnig050759.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- Mblk-1
- Assembly
- GCA_004329405.1
- Location
- SJPC01001069.1:6631-20187[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 1.9e-14 54.9 0.1 1 45 36 81 36 81 0.96 2 2 4e-18 3.4e-14 54.1 0.0 1 43 474 517 474 519 0.95
Sequence Information
- Coding Sequence
- ATGACCGGACCGGttgcggcggcggcggcagcggcggcggcggcggctgcGGCAGGCGTCGGTGGTGTTCCTGTGGTGGGTGCCGGGGGTGGCAGGAGGACTTACACCGAGGAGGAGCTGCAGGCCGCCCTTAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTATGGGATACCGCGTAGCACGCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCagtcaccaccaccaccaccatcaccaccaccatcactaCCACTActgctactactactactactactactactactacaaCACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGATGAGGTGGACGACAAAGAATTATCCGGCGCGGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTGAAGCCTCTGCTCTCGTTGGAGGATCTCGTCAGGTTCTCCGCGTTCGAAGGAAGCGGTGGTGATTCCCTCAGGAATCTGTTACAACGGGGACACGAGACAGGAACTGAATGGCCGGGATTGGAACACGCCAACATCGGTccttatattcaaaaaatgttggctgctgctgtgccattagGACTGGACACACGAGACTATCGCATACCAGATGTGGTGAGGAAGCTGATGAGCGAAGATAAGAGGCTGAACAAGAGTGTGAACGGTGATCAGTCGCAGCCGCATCATCAGCACCATCATCATCCCTTAGCTGCGCATCAGCAGACGCAGtcgcagcaacagcagcagcgcgTACCCATGACGAACGATGATTTCAATCCCAACATCGAGGAGGAGGCCAGCGATAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAGGGTTTCGCGGCTGCCGCCTCGAGTCCGGGTCTTCTGGAGCGAGCTAGCCCAGCTTTCTCCGGCACTAGCAGCCCAACGAATTCGCTGGTGGGCAAAGCGGTGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTTCAGGAGGGCCAAACGCCGGGCGCGACCGGTATGCCGGGTTGCCAATCGGCCGGCGTCGTTCCGCCGCAGCAGGCTTTGATGACGGATCCGAATCCGTTTAAGAGGGGACGTTACACGCCTCCGCAACCGccgcagcaacagcagcagcaacagccatcgtcgcagcagcagcagcagcaagccaAGCAGCAGACACAAGATGCGAACAAGTCAAAACAGGGCACCGGCGGTAAGGGTACCAGACCGAAACGTGGCAAGTACAGGAACTACGATAGGGATAGTCTCGTCGAGGCGGTACGCGCGGTACAGCGCGGTGAGATGAGCGTGCATCGTGCTGGCAGCTTTTATGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCGGATGACAAATCAAAGGAGATCGCGACGACGGCAGTGGCAGCGGCAGCCGCGGCGATGCGGCCAGGCACTGCCGGCGTCGACAAGAAACCGCAGCTGAAACCGCAGCAGAAGCCGTTTACGCCGCCGGGCGGCATACCCGGTCCAAATGGACTGAAAATGCCACCGTTCATGGAGGGTATGCCTCCTCATTTGCCGTTCGCGGCCTTCAACTTCTGGAACCCGGGACCTTTCATGCCCTCGCCTTTTATGGGTGGCGGACCGAACGTGCCGATCCTGCCGGAACAATACTTTGCGGCGTCGCAGAGAATGCGCGGGCTGCAGGAACAACAACGAAACGCGGCGATGGTACAGCATCAGCAACGAGACCGTGACGGCGGTGTTGGCGTATCCGGAACGCCAGACACAGCTGGAACCTCGAATTCTCGAAGCGCGTCGATAGCCAAGGCGCCGCGCGACATGGTAGAAAGCATCTACGATGGATCCGGCGCGAATGGCAGTTTCTTGGACAATCTGATTAGGTCGAGCCTCGAGACAGGCATACCAAGGGACCAGCGGACGATGGCGGAGGTGAGgaatcagcagcaacaatcaTCGTCGCAGGCGCAACATCCGGAGACGATGAGTAGTAAGACGCTGATCGATCAGCTTTGCAGAAATTCGAGAAGAACTCCGTTGCCACGAATGGCGCAAGATAGCAGTGAGGATGAGAGTTATCGAGGACCAGCGGGCAGGATAGTGCCGGAAAGGCCGGAGCGTGTGCCTACGGTTGATCTCAGCCCATCACCATCGGAGAGGGGTCGCACGGAGGACGGCAGCGATCGGCTCACGTCACCACCGACGCCTCTGTCGATTTCTCGAGCGGGTAGCAGGGACGAGGATAGCACCCGTGACTCGAGAATCGATCGCAGCAGCAGAGAGCGCGAAGTTCATAACGGCGGCCAGGAGGATCGCGATAGGAAGCAGCCTTTGAGcctgcaacagcagcagcagcagcagcagccacagCTGAATCATTACCCGGACTTACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGccgcagcaacaacaaaaggAATACGCTGCCGTGAGCGGGTTGGTCGTGCAACTGCAGAGGGGCTACAATACCGCGAGCAACAGATCCGGCGAGCCGACTAACAGCCAACAGCCGGCAGCGGAGCAACGTGGCCCCGCGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MTGPVAAAAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPVTTTTTITTTITTTTATTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSAFEGSGGDSLRNLLQRGHETGTEWPGLEHANIGPYIQKMLAAAVPLGLDTRDYRIPDVVRKLMSEDKRLNKSVNGDQSQPHHQHHHHPLAAHQQTQSQQQQQRVPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAASSPGLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGATGMPGCQSAGVVPPQQALMTDPNPFKRGRYTPPQPPQQQQQQQPSSQQQQQQAKQQTQDANKSKQGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKEIATTAVAAAAAAMRPGTAGVDKKPQLKPQQKPFTPPGGIPGPNGLKMPPFMEGMPPHLPFAAFNFWNPGPFMPSPFMGGGPNVPILPEQYFAASQRMRGLQEQQRNAAMVQHQQRDRDGGVGVSGTPDTAGTSNSRSASIAKAPRDMVESIYDGSGANGSFLDNLIRSSLETGIPRDQRTMAEVRNQQQQSSSQAQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQQQQPQLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASNRSGEPTNSQQPAAEQRGPALSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125824;
- 90% Identity
- iTF_00182544;
- 80% Identity
- -