Pcoc010731.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014839585.1
- Location
- QVOB01007811.1:41432-48572[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-18 1.1e-14 54.2 0.1 1 45 47 92 47 92 0.96 2 2 5.6e-18 1.2e-14 54.1 0.0 1 43 492 535 492 537 0.95
Sequence Information
- Coding Sequence
- ATGTCAAATTGCAGACAAAAAAGAGCGTCGAAACTGGCGCGTCCGGTGTATATAACGTTGGCGGCGGCGGCGGCTGCGGCTGCGGCAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGAACTTATACCGAGGAGGAGCTGAAGGCCGCTCTCAATGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCGGCGGTGATCTACGGGATACCTCGTAGCACCCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGAATCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACCACCATCACCACCACCACCACCACCACCACTACTACTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCAACTTGATGTCCGCGAGGTTGCAAGACTCGAGGTGGACGACAAAGAACTATCCGGCGCGGAAGAGGAGAAGGAAGTCGAGAAGGCCCTGTTAAAACCTTTGCTGTCGTTGGAGGATCTTGTGAGGTTCTCCGCGCTCGAAGGAACCGGCAGCGATTCCCTTAGGAACCTGCTGCAACGGGGTCACGAGGCGGGAACCGAATGGCCGGGATTGGAACACCCGAACATCGGTCCTTACATTCAGAAGATGTTGGCTGCCGCCGCACCAATGGGTTTAGAGACGCCAAACTATCGCATACCGGACGTGGTGAGAAAGCTGATGACCGAGGACAAGAGGCTGAACAAGAATGTAAACGGTGATCAGTCGCAACCACATCAACAGCACCATCATCAGCAACACCATCCCCTCGCGGCGCATCAGACTCAGTCACAGCAGCGTACGTCCCTGTCGAACGACGATTTCAATCCTAACATCGAGGAGGAGGCCAGCGACAGTGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCATTTGCTCAGGGCTTCGTGACTGCAGCCTCGAGTCCGAGTCTTTTGGAGCGAGCCAGTCCAGCGTTCTCCGGCACCAGCAGCCCTACAAACTCACTGGTTGGCAAAGCGGTAGCCGTTAACTTTCGCGACGTTATTGCTAAGAGCATAAGCGTTAAGTTCCAAGAAGGCCAGACGCCTGGCGCGGCTGGCATGCCAAGTTGCCAACCGGCCGGCGTTGTTCCGCCTCAGCAGGTTGGCAGCATGTTGACCGATCCGAGTCCGTTCAAGAGGGGCCGTTATACGCCCCCGCAACCGCCACAACAGCAGCAACCGCAAACGCCGCAGCAACAGTCGCAACAACAGCAATCCAAACAACAGACGCAGGATGCGAACAAATCGAAGCCGGGTACAGGCGGCAAAGGTACCAGGCCGAAACGCGGCAAGTACAGAAACTACGACAGGGACAGCCTCGTCGAGGCGGTGCGCGCGGTCCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGAAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACAGCGACGACGGCGACGACCGCGGCTGCGGCGATGCGACCGAGTGCTGCTGGCGTTGACAAGAAACCGCAGCTGAAACCGCAAAAGCCTTTCACGCCGCCGAGCGGCATACCTGGTCCAAACGGATTGAAAATGTCACCGTTCATGGAGGGTATGCCCCACCTGCCGTTCGGGCCCTTTAACTTCTGGAACCCGACGCCCTTCATGCCCGCCCCGTTTATGGGTGGCGCACCAAACGTGCCGATTCTGCCAGAACAATACTTCGCGTCGCAGAGAATGCGCGGATTGCAAGAACAACAACGAAACGCGGCGATAGTGCAGCAGCAGCATCAGCCACGAGACCGAGACGGAGTCGGCGTATCCGGAACGGCGGACGCGGCTGGCACTTCGAACTCCCGAAGTGCATCGATGTCGAAAGTGACGCGCGAAATAGCAGAGATCTACGATACGCCCGGGGCGAACGGCAGTTTTCTGGACAATCTGATCAGGTCGAGCCTTGAGACGGGCATTCCAAGGGACCAGCGGGCGATGGCGGAGGCGAGAAGCCAGCAGTCGTCGTCGTCGTCGTCGTCGCAGCAGCAGCAGCAGCAGCAACACCCGGAAACGATGAGCAGCAAAGCGCTGATCGACCAGCTCTGCAGAAACTCGAGAAGGACTCCGCTGCCGCGGTTGGCGCAGGATAGCAGCGAGGACGAAAGTTATCGAGGACCAGCGGGCAGGATAGTGCCTGAAAGGCCAGAACGCGTGCCCACGGTCGATCTTAGCCCGTCGCCCTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCACCAACACCCTTGTCCATCACCCGTGCGGGCAGCAGGGATGAGGATAGCACCCGTGACTCGCGCAGCAGCAGAGAGCGCGAGGTTCACAACGGCCAGGAGGATCGTGATCGGAAGCAGCCTTTGAGCCTGCAGCAGCAACCGACACAGCTGACTAACCACTACCCAGACATACACAACCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAGTACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGACCCGGCGAATCGACTAACAGCCAGCAGCCGGCGTCGGAGCAACGCGGCCCCACGCTCAGCATGGAGGACTCCGTAGAGCAGTAG
- Protein Sequence
- MSNCRQKRASKLARPVYITLAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELKAALNDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRQLDVREVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGSDSLRNLLQRGHEAGTEWPGLEHPNIGPYIQKMLAAAAPMGLETPNYRIPDVVRKLMTEDKRLNKNVNGDQSQPHQQHHHQQHHPLAAHQTQSQQRTSLSNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFVTAASSPSLLERASPAFSGTSSPTNSLVGKAVAVNFRDVIAKSISVKFQEGQTPGAAGMPSCQPAGVVPPQQVGSMLTDPSPFKRGRYTPPQPPQQQQPQTPQQQSQQQQSKQQTQDANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTATTAAAAMRPSAAGVDKKPQLKPQKPFTPPSGIPGPNGLKMSPFMEGMPHLPFGPFNFWNPTPFMPAPFMGGAPNVPILPEQYFASQRMRGLQEQQRNAAIVQQQHQPRDRDGVGVSGTADAAGTSNSRSASMSKVTREIAEIYDTPGANGSFLDNLIRSSLETGIPRDQRAMAEARSQQSSSSSSSQQQQQQQHPETMSSKALIDQLCRNSRRTPLPRLAQDSSEDESYRGPAGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSITRAGSRDEDSTRDSRSSREREVHNGQEDRDRKQPLSLQQQPTQLTNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRPGESTNSQQPASEQRGPTLSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125824;
- 90% Identity
- iTF_01267465;
- 80% Identity
- -