Tsim009839.1
Basic Information
- Insect
- Tetramorium simillimum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_011636635.1
- Location
- VBVQ01003081.1:13018-20486[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-18 7.5e-15 54.9 0.1 1 45 35 80 35 80 0.96 2 2 1.7e-17 1.3e-14 54.1 0.0 1 43 469 512 469 514 0.95
Sequence Information
- Coding Sequence
- ATGACCGGACCGGTTGTgaccgcggcggcggcggcggcggcggctgcggcAGGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGCGGCAGGAGGACTTACACCGAGGAAGAGTTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTTGGCACGCGGAGGGCAGCGGTGATCTACGGGATACCGCGTAGCACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccaccactactactactacaACACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCAACTTGGTGTCCGCGAGGTTGCAAGATTCGAGGTGGATGACAAAGAATTATCCGGTGCggaagaggagaaggaagTCGAGAAGGCCCTGCTGAAGCCTCTACTCTCACTGGAGGATCTCGTAAGGTTTTCCGCGCTCGAGGGGACCGGTGGTGATTCCCTCAGGAACCTGCTGCAACGGGGACACGAGACAGGAGCCGAATGGCCGGGACTGGAACATGCAAACATCGGTCCCTACATTCAAAAGATGTTGGCAGCCGCTGCACCATTAGGCATGGATACGCGAGACTATCGCATACCCGAAGTGATGAGGAAGCTGATGTGCGAGGACAAGAGGCTGAACAAGAACGTGAACGGAGACCAGTCGCAGCCGCATCACCATCAGCACCATCCCCTCGCGGCGCATCAGCAAACGCAGCAGCAGCGCGCGCCCATGACGAACGACGACTTCAATCCTAACATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGCAAGAACGGCGAGCCAACTTCCGCCGCGTTCGCCCAGAGCTTCGCGGCTGCCGCGTCGAGTCCGGGCCTCCTGGAGCGAGCTAGTCCAGCGTTCTCCGGCACTAGTAGCCCCACGAATTCGCTGGTGGGCAAAGCGGTGTCCGTTAATTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGCCAGACGCCCGGCGCGGCCGGCATACCGGGCTGCCAATCGGCCGGCGTGGTTCCATCGCAGCAGGCCATGATGACAGACCCGAGTCCGTTCAAGAGAGGTCGTTACACACCTCCTCAACCACCGCAACAGCAATCATCggcgcagcagcagcagtccAAGCAGCAGTCGCAAGATGCGAACAAGTCGAAGCCGGGCACCGGCGGCAAGGGCACCAGACCTAAGCGCGGCAAGTATAGGAATTACGACAGGGACAGCCTCGTCGAGGCGGTACGCGCAGTCCAGCGCGGCGAAATGAGCGTGCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAGTCGAAGGAGACTGCGAcgacggcagcggcggcggcggcggcagcggcaatGCGGCCGGGCACTGCTGGCGTTGACAAGAAGCCGCAGCTGAAACCACAAAAGCCGTTCACACCGCCCGGCGGTATACCCGGTCCGAACGGATTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGGGCCCTTCAACTTCTGGAACCCGACGCCCTTCATGCCCTCCCCCTTCATGGGTGGCGCGCCGAACGTGCCGATCCTTCCGGAACAATATTTCGCGTCGCAGAGAATGCGCGGCTTGCAGGAGCAACAACGAAACGCCACGATGGTGCAGCAACAGCACCAGCAACGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGAACGAGACCGGGATCGAGACCGAGAACGAGACGGGGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGGCGAAGGCGCCGCGCGACATGGTGGAGAGTATCTACGACGGGCCCGGGGCAAACGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTTGAGACAGGCATACCAAGGGACCAGCGGACGATAGCGGATGCGAGgaatcagcagcagcagtcgTCGTCGCAACATCCGGAAACGATGAGCAGCAAGACCCTGATCGACCAGCTGTGCAGAAACTCGAGGAGGACCCCGCTGCCGCGAATGGCGCAGGACAGCAGCGAGGACGAGAGTTATCGAGGACCAACGGGCAGGATGGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTCGATCTAAGCCCGTCACCGTCGGAGAGAGGTCGCACGGAGGACGGCAGCGACCGGCTGACGTCACCGCCGACGCCTCTGTCGATCTCCCGAGCGGGTAGCAGGGACGAGGACAGCACCCGTGACTCGAGGATCGATCGCAGCAGCAGAGAGCGCGATGTTCACAACGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGCttgcaacagcagcagcagccacAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATTCGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGGTCCGGCGAGCCGACTAACAGCCAGcagccggcggcggcggcggcggcggagcaGCGCGGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MTGPVVTAAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPNTTQNASATTPPPQVDEFNTRQLGVREVARFEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGTGGDSLRNLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPLGMDTRDYRIPEVMRKLMCEDKRLNKNVNGDQSQPHHHQHHPLAAHQQTQQQRAPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFAAAASSPGLLERASPAFSGTSSPTNSLVGKAVSVNFRDVIAKSISVKFQEGQTPGAAGIPGCQSAGVVPSQQAMMTDPSPFKRGRYTPPQPPQQQSSAQQQQSKQQSQDANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDRDRDRDRDRDRDRERDRDRDRERDGVGVSGTADAAGTSNSRSASMAKAPRDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRTIADARNQQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRMVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSRERDVHNGGQEDRDRKQPLSLQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEFAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAAAAEQRGTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125824;
- 90% Identity
- iTF_00182544;
- 80% Identity
- -