Vcam006692.1
Basic Information
- Insect
- Venusia cambrica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951394065.1
- Location
- OX596040.1:7591200-7617143[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 1.2e-11 44.8 0.0 1 42 153 195 153 198 0.92 2 2 1.9e-18 1.2e-15 57.6 0.0 1 43 359 402 359 404 0.95
Sequence Information
- Coding Sequence
- ATGTTGGACATAAACCTCCTCCATGATTATTATATGAGTCCCGCATCGGAGTCCGACAGTAGCTCGGTCTCGGGCGCGCGGAGCcctgccgccgccgcgccgccgcagCTACTGCAGAACCTGCTGCAGCTACATGCCCAGAACCCTCAGGCTATTGCCCAGTTCCAGCAAATGATGGCAGCGTTGGCGGCGCTGGGCACGGGACTGGTCCCTCCGCCGTTTACGCAGAACTGGATGCTGCCAAGGATGGTGCAGAATCGACAACAGACTGACACGCAAGCAGATGACAAGGCCGCTCCCTCACCCCCTCTGCAGACGGAACAGCCCCTGGACCTCAGCGCCAAATCTACTTCCAGCACCAGCGGGACACCTCCACCTGAATCCAAAAACTTGGACAACCGATTGAAACGCTCTGCCCAAGATGGCGCGGGGAACAGCGCTACCAAACGCACCTACACGGAGGACGAGCTACAATCCGCCCTCCGCGACATCCAGACCGGCCGCCTCGGCACCAGACGAGCGGCCGTGGTCTACGGTATCCCTCGGTCAACCCTTCGGAACAAAGTCAACAAATTCGGTCTCACCCTGGATCAACACGAGTCGGAACCCGACAGCGATCCCGAAAGAACCGACTCCCCGCCATCCGTCATCCTCAAAATCCCAACATTCCCCCCACCGGACGATAAATCACCTTCCCCTGCAACACCAGTGACCACACCCATCACACCAATGACTCCCAACTTCCAGTCCCAGCATCCCGCCTGCCAAACGCCATTACTTCTCCCACCATCCGTCTTCGCGGACCCCCCGACCCAACACCTCTTCACATCTCTCAGCGATGTTATAGCTAAGAGCATCAGCCAGAAATTCCAGCAGCCTCTTGACCGGACGCAGGAGATGCAACAATACATGCGAGCTCCTGATCGACACGTTTCCGTGATCAAAACACCACCTGAAAACCACCAGAGGAACTACCAAATGCCGAGTAATTCGCGAGGTATGTCGAACAACAACGGCCAAGCAGCCGCTGGAGGTAAAGGTACGCGACCGAAGCGTGGTAAATACAGAAATTATGACAGAGACAGCTTGGTGGAAGCGGTGAAGGCGGTTCAGAGGGGGGAGATGTCAGTTCACAGAGCGGGTTCCTACTACGGAGTACCGCATTCTACACTGGAGTACAAAGTCAAGGAGCGGCATTTAATGCGTCCCAGAAAACGTGAGCCGAAGCCCCAGCCTGACGTAAAACCGCAGCCTCCGAAGCCGCAACCCCCAAAACCTGCAACAAAACCGTTCACAAACGGCCTCAACGGACCGGAAACCGGGGGGTATCCTCCGGGGTACCCGTTCTGGCCCGGCCCCGGGTTCGCCCCGCACCCCGCCCCGGATTTGTACGCGTCACATATGATGCGGCGATTACGCGAGGAAGCCCCTCCTCCCGCTAACGGATCGTTCCTCGAAGGGATAATCAGATCTAGTTTGGAGCGGCCCGGGGCTGCGTTGCTGCAGCGATTAACGGCTGAGCCGCGGTCTATGGGTATGCCTGGTCCTGTTGATTCTCCAAGCTTACTACGAAGATTGGCGGGGAACGCGTCGCCAGAAGATGCGCCGCCGGCGAGACGTCCGCGGCTCGACAGCTCCGGCACGCAACTGGCAGCGGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCAGATAAACTGCGGCCGCGCAACGGTACTCCCACGCCTCCGCTCTCACCCCCGCCCGCCCCGCCAGCCCCTCCGGACCGCGCTTAG
- Protein Sequence
- MLDINLLHDYYMSPASESDSSSVSGARSPAAAAPPQLLQNLLQLHAQNPQAIAQFQQMMAALAALGTGLVPPPFTQNWMLPRMVQNRQQTDTQADDKAAPSPPLQTEQPLDLSAKSTSSTSGTPPPESKNLDNRLKRSAQDGAGNSATKRTYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTLDQHESEPDSDPERTDSPPSVILKIPTFPPPDDKSPSPATPVTTPITPMTPNFQSQHPACQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRTQEMQQYMRAPDRHVSVIKTPPENHQRNYQMPSNSRGMSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPATKPFTNGLNGPETGGYPPGYPFWPGPGFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRSMGMPGPVDSPSLLRRLAGNASPEDAPPARRPRLDSSGTQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697249; iTF_01335847; iTF_00632680; iTF_00704873; iTF_00662157; iTF_00661201; iTF_00701870; iTF_00686255; iTF_00321521; iTF_00703857; iTF_00696406; iTF_00705909; iTF_00699098; iTF_00700930; iTF_00700017; iTF_01170493; iTF_00810918; iTF_00856518; iTF_00909656; iTF_00361535; iTF_00737388; iTF_00638572; iTF_01182591;
- 90% Identity
- iTF_00810918; iTF_00856518; iTF_01335847; iTF_00737388; iTF_00638572; iTF_00662157; iTF_00661201; iTF_01529117; iTF_01182591; iTF_01170493; iTF_00361535;
- 80% Identity
- -