Cpec018276.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951394395.1
- Location
- OX596371.1:6436050-6469744[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 1.2e-11 44.5 0.0 1 42 246 288 246 291 0.92 2 2 1.9e-18 1.2e-15 57.4 0.0 1 43 454 497 454 499 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAACAATACCAGGACACGTTAACCCCGAAGCCAGAGGAGTCCAGCGACGAAGATTCCATGCCATCCACCGACCAGCCGCCCGCGCTAAAGATAAAGACGATCCAGCAGATCAACGAGGACGAGCCGAAGAGACCGGAGACAATCCTGGAGAGTTTGATCAAGCGGCCGGCGACGCAGCCAAAGCTGGAGCTGGCGGAGGAACCGACAGACTGGAAGCCACCGGACAAATGCTACTTCTGCACTGACGGAGAGAAGGGAGAGACGGTGGCTGAAACACAACCGCAAGGAGGCACCACGAGTCCTGCATCGGAGTCAGACAGCAGTTCCGTGTCGGAGGCGAAGAGTCCTGCTGCAGCAGCTCCTCCGCTGCTGCAGAACCTCCTCCAGTTGCACGCGCAGAACCCTCAGGCTATTGCGCAGTTCCAGCAGATGAtggcggcgctggcggcgctGGGCACCGGACTGGTGCCGCCGCCCTTCGCGCAGAACTGGATGCTGCCCAGGATGGTGCAGAACCGACAGCAGTGTGACGCCAGGTTAGCGGAGGACAAGGCAGCCCCCCCGTCTCCACTCCTAGCGGAACAGCCCCTGGACCTGAGCGCCAAGTCTACCTCCAGCACCAGCGGCACCCCGCCACCTGACGCCAAAAACTTGGACAACAGATTAAAACGCGCAGCCCTAGACGGAGCATGCAACAGTACAACCAAACGTAACTACACAGAAGACGAGCTCCAGTCAGCTCTCCGAGACATCCAGACCGGTAGGCTCGGCACCAGGCGTGCAGCAGTCGTCTACGGCATCCCCAGATCCACACTACGAAACAAAGTCAACAAGTTTGGCCTCACACTAGACCAGCATGAGTCAGAGCCTGACAGCGATCAGGAACGAACTGAATCCCCACCATCGGTGATTTTAAAGATCCCGACATTCCCCCCACCGGATGATAAGAGCCCTTCACCGGCCACACCAGTGACAACGCCAATAACACCAATGACGCCTAACTTCCCATCCTCACACAACCCAACTTGCCAAACGCCTTTACTCCTCCCACCTTCGGTATTCGCCGATCCACCAACCCAACACTTGTTTACATCTCTCAGTGATGTTATAGCCAAAAGCATTAGCCAAAAGTTCCAGCAGCCTTTAGACAGGCCGCAAGGAGACATGCAGCAGTATATGCGAGCTCCGGACCGACACGTTTCAGTTATCAAAACTCCCCCTGATAACCATCACAGGAATTACCAAATGCCCAGCAATTCCAGAGGTGTCTCTAACAATAACGGCCAAGCAGCTGCAGGAGGGAAGGGTACTCGTCCCAAGCGAGGGAAATACAGAAACTACGACAGAGACAGCCTTGTAGAAGCTGTCAAAGCGGTTCAGAGAGGTGAGATGTCGGTTCACAGAGCTGGCTCGTACTATGGAGTACCGCACTCGACGCTTGAGTATAAAGTAAAGGAGCGCCATTTAATGCGCCCTCGAAAACGAGAGCCCAAGCCCCAGCCAGACGTAAAACCGCAGCCTCCGAAGCCGCAACCCCCTAAACCAGCGACAAAGCCCTTCTCGAACGGACTCAACGGTCCGGAAACTGGGGGATACCCGCCTGGATACCCATTCTGGCCTGGAGCGAGCTTCGCGCCGCATCCTGCGCCGGACCTCTACGCGTCTCATATGATGCGTAGATTGCGTGAGGAAGCGCCTCCGCCAGCGAACGGATCCTTCCTAGAAGGGATTATACGGTCTAGCCTGGAGCGGCCTGGTGCCGCGCTGTTGCAGCGACTGACGGCTGAACCCCGGTTGCCTGGAATTCCCCAAGACTCCCCGAGTCTGCTGAGGAGGCTGGCAGGGAACGCGTCTCCAGAAGACGGACCCCCCGCCAGACGACCGCGCTTGGACAGTTCTGATAGGCAACTGGCGGCGGAGATGCGCGAGGCTGTTCAGAGATTGCGTGCGGATAAACTCCGGCCACGTAACGGCACCCCCACTCCTCCTCTCTCCCCCCCACCGGCACCCCCGGCCCCTCCAGACCGTGCCTAG
- Protein Sequence
- MGRRKWKQYQDTLTPKPEESSDEDSMPSTDQPPALKIKTIQQINEDEPKRPETILESLIKRPATQPKLELAEEPTDWKPPDKCYFCTDGEKGETVAETQPQGGTTSPASESDSSSVSEAKSPAAAAPPLLQNLLQLHAQNPQAIAQFQQMMAALAALGTGLVPPPFAQNWMLPRMVQNRQQCDARLAEDKAAPPSPLLAEQPLDLSAKSTSSTSGTPPPDAKNLDNRLKRAALDGACNSTTKRNYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTLDQHESEPDSDQERTESPPSVILKIPTFPPPDDKSPSPATPVTTPITPMTPNFPSSHNPTCQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRPQGDMQQYMRAPDRHVSVIKTPPDNHHRNYQMPSNSRGVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPATKPFSNGLNGPETGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRLPGIPQDSPSLLRRLAGNASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01509508;
- 90% Identity
- iTF_01509508;
- 80% Identity
- -