Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_951394285.1
Location
OX596159.1:2100808-2122663[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7e-15 1e-11 44.8 0.0 1 42 161 203 161 206 0.92
2 2 7e-19 1e-15 57.6 0.0 1 43 364 407 364 409 0.95

Sequence Information

Coding Sequence
ATGAGTGAGGAAGTGGCAGATGGCACTGATTCTGATGATGATCAACTGTTTCTCTTGTTACAGAGTCCTGCATCGGAATCAGACAGCAGTTCTGTGTCGGGCGCGAAGAGTCCCGCCGCTGCTGCGCCGCAGCTGCTGCAGAACCTGCTGCAGCTGCACGCGCAGAACCCACAGGCGATAGCACAGTTCCAGCAGATGATGGCGGCATTAGCGGCGCTGGGCACGGGGCTGGTGCCGCCTCCCTTCACGCAGAACTGGATGCTGCAGAGGATGGTGCAGAATCGACAGCAGTGCGACACCAGGCTAGCGGAAGACAAGGCAGCCCCCTCGTCACCTCTCCAGGCGGAACAGCCCCTGGACCTCAGCGCTAAGTCTACCTCCAGCACCAGCGGCACCCCGCCACCTGACTCCAAGAATCTGGATAACAGATTGAAACGAGCGGCTCATGATGGAGGAAATAGCACAACCAAACGTAACTACACGGAAGATGAGCTCCAGTCAGCACTCCGCGACATCCAGACTGGCCGGCTCGGCACCAGGCGCGCGGCCGTGGTCTACGGCATCCCTCGCTCCACTCTCCGAAACAAAGTCAATAAGTTCGGCCTCACGCTGGACCAGCACGAATCAGAGCCCGACAGCGACCAGGAAAGAGCTGAGTCCCCACCCTCGGTTATCCTCAAAATCCCAACCTTCCCCCCACCGGACGAGAAATCACCATCACCAGCCACCCCAGTGACTACCCCAATAACACCTATAACTCCCAACTTCCAACACAACAACCAAACGCCGCTGCTTCTCCCGCCGTCCGTGTATGCCGACCCTCCGACGCAACTCTACACGTCTCTCAGCGACGTGATAGCGAAGAGCATCAGCCAAAAGTTCCAGCAGCCGCTGGATAGAACTCAAGCTGACATGCAGCAGTTCATGCGAGCTCCGGACCGACATGTCTCGGTCATCAAAACCCCTCCTGATAACCACCACAGGAACTATCAGATGCCGAGCAATTCCCGAGCTGTCTCCAACAATAATGGGCAAGCGGCTGCAGGAGGGAAAGGTACTCGTCCCAAGCGAGGGAAGTATAGAAACTATGATAGAGACAGTTTGGTGGAAGCTGTGAAGGCGGTTCAGAGAGGTGAAATGTCGGTTCACAGAGCTGGCTCGTACTACGGGGTCCCGCACTCAACTTTGGAGTATAAGGTCAAAGAGCGTCACTTGATGCGACCGAGAAAACGTGAACCGAAACCTCAGCCTGACGTGAAGCCCCAGCCTCCGAAGCCACAGCCCCCCAAGCCGGCGACCAAGCCTTTCTCCAATGGACTCAACGGTCCCGAAACCGGGGGCTACCCTCCAGGGTATCCATTCTGGCCGGGAGCCAGCTACACGCCGCATCCGACGCCGGATCTGTACGCATCGCACATGATGCGCCGGTTACGCGAGGAGGCGCCCCCGCCGGCGAACGGCTCCTTCCTCGAAGGTATCATCAGGTCCAGCTTGGAACGGCCTGGGGCTGCGCTGCTGCAGCGGCTAACAGCGGAGCCTAGGTTGCCAGGTATTCCTCAGGACTCGCCAAGTCTGTTGCGGCGGCTGGCCGGCACCGCGTCGCCTGAAGACGTGCCGCCGGCTAGACGACCGCGCCTGGACAGCTCTGACAGACAACTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCGGACAAGCTCCGGCCTCGCAACGGGACCCCCACGCCCCCCCTCTCGCCCCCGCCggcgccccccgcgcccccgGACCGCGCCTAG
Protein Sequence
MSEEVADGTDSDDDQLFLLLQSPASESDSSSVSGAKSPAAAAPQLLQNLLQLHAQNPQAIAQFQQMMAALAALGTGLVPPPFTQNWMLQRMVQNRQQCDTRLAEDKAAPSSPLQAEQPLDLSAKSTSSTSGTPPPDSKNLDNRLKRAAHDGGNSTTKRNYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTLDQHESEPDSDQERAESPPSVILKIPTFPPPDEKSPSPATPVTTPITPITPNFQHNNQTPLLLPPSVYADPPTQLYTSLSDVIAKSISQKFQQPLDRTQADMQQFMRAPDRHVSVIKTPPDNHHRNYQMPSNSRAVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPATKPFSNGLNGPETGGYPPGYPFWPGASYTPHPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRLPGIPQDSPSLLRRLAGTASPEDVPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01509508;
90% Identity
iTF_01509508;
80% Identity
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