Eabb015217.1
Basic Information
- Insect
- Eupithecia abbreviata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_943735975.1
- Location
- CALSER010000142.1:777130-783956[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-14 1.3e-11 44.2 0.0 1 38 61 99 61 103 0.94 2 2 7.8e-19 6.9e-16 57.9 0.0 1 43 265 308 265 310 0.95
Sequence Information
- Coding Sequence
- ATGGCAGACGAGAAGCCAGCACCCTCGCCTCCCCTGCAAGCGGAGCAGCCTCTGGACCTCAGCGCCAAGTCTACATCCAGCACCAGTGGAACACCTCCGCCTGACTCTAAGGGCTTAGATAACAGATTGAAGCGCTCAGCCCCAGATGGACCCAGCAACAGTACAAGCAAGCGCATCTACACAGAGGACGACCTCCAATCCGCTCTCCGCGACATCCAGACCGGGCGCCTCGGCACGCGGCGAGCCGCCGTCGTCTACGGCATCCCCCGCTCCACCTTACGCAACAAGGTCAACAAGTTCGGCCTCACCCCCGACCAGCACGACTCCGACCCCGAAAGCGACCCCGAACGAGACTCCCCACCCTCCGTCATCCTCAAAATCCCCACCTTCCCCCCACCAGACGACAAATCCCCGTCACCAGCGACACCCGTCACACCCATCACACCGATGACTCCAACCTACCAACCACACAACTCCTCCTGCCAAACTCCGCTCCTACTCCCACCATCTGTCTTCGCTGACCCCCCGACGCAACACCTTTTCACATCTCTCAGCGACGTCATAGCGAAGAGTATCAGCCAAAAGTTCCAGCAGCCGCTCGATAGAACGCAGGATATGCAGCAGTACATGCGAGCTCCAGACCGACATGTCTCTGTGATCAAAACTCCTCCAGACAACCACCAGAGGAACTACCAGATGCCGAGCAATTCTCGAGCGGTTTCTAACAATAATGGTCAAGCGGCTGCAGGTGGCAAAGGCACACGACCCAAAAGAGGAAAGTATAGGAACTACGACAGAGATAGCTTGGTCGAAGCTGTCAAGGCAGTGCAGAGAGGAGAAATGTCGGTTCACAGAGCCGGTTCCTACTACGGTGTACCGCACTCGACTCTGGAATACAAAGTCAAGGAGCGACATCTAATGCGGCCGCGGAAGCGCGAGCCCAAGCCTCAGCCGGATGCGAAACCGCAGCCTCCGAAGCCGCAACCTCCGAAACCACCGATGAAACCCTTCACAAATGGACTGAACGGTCCTGAAACCGGAGGCTATCCTCCGGGTTACCCCTTCTGGCCGGGAGCGAGCTTCGCGCCGCATCCTGCGCCTGATCTATACGCGTCACACATGATGCGGAGACTTCGCGAGGAGGCGCCGCCGCCGGCCAACGGATCCTTCCTCGAAGGGATCATCAGATCCAGCTTGGAACGCCCTGGAGCGGCGCTCCTGCAGCGGTTGACGGCTGAACCGCGCGTGCCTGGCATTCCCCAAGACTCCCCGAGTCTGCTCCGGAGATTGGCAGGAAACGCGTCGCCCGAAGACGGTCCTCCCGCGAGACGTCCGCGCCTGGACAGCTCCGACCGTCAACTGGCAGCGGAGATGCGCGAGGCGGTGCAACGACTGCGCGCCGACAAGCTGCGGCCTCGGAATGGAACCCCCACCCCGCCGCTGTCGCCCCCGCCGGCGCCCGCGGCTCCTCCTGACCGTGCTTAG
- Protein Sequence
- MADEKPAPSPPLQAEQPLDLSAKSTSSTSGTPPPDSKGLDNRLKRSAPDGPSNSTSKRIYTEDDLQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTPDQHDSDPESDPERDSPPSVILKIPTFPPPDDKSPSPATPVTPITPMTPTYQPHNSSCQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRTQDMQQYMRAPDRHVSVIKTPPDNHQRNYQMPSNSRAVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDAKPQPPKPQPPKPPMKPFTNGLNGPETGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRVPGIPQDSPSLLRRLAGNASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01509508;
- 90% Identity
- iTF_01171387;
- 80% Identity
- -