Sbip017272.1
Basic Information
- Insect
- Scotopteryx bipunctaria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949320045.1
- Location
- OX439462.1:6128888-6147222[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-12 1.1e-09 38.1 0.0 1 38 136 174 136 178 0.94 2 2 1.3e-18 9e-16 57.7 0.0 1 43 340 383 340 385 0.95
Sequence Information
- Coding Sequence
- ATGAGTCCCGCATCGGAGTCGGACAGCAGTTCTGTGTCGGGGGCGAAGAGcccggccgccgccgcgcccccACTGCTGCAGAACTTGCTCCAGCTGCACGCCCAGAATCCTCAAGCCATCGCACAGTTCCAGCAGATGATGGCGGCGCTGGCGGTGGCTGGGTTGGTGCCACCACCGTTCACACAGAACTGGATGCTGCCGAGGATGGTACAGAACCGGCCGCAGTGTGACACACTGGCGGAGGACAAGGCGGCCCCGCCGTCCCCCGCGCCGGAGCAGCCCCTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGTGGTACCCCACCGCCGGACCCCAAGACTCTTGACAACAGATTGAAACGCGCAGCCCTCGACGGAGCGGGCAACAGCAAGCGGAACTACACGGAGGACGAGCTGCAGTCCGCCCTGCGGGACATCAAGACCGGCCGGCTTGGCACCAGGCGTGCCTCCGTCGTCTACGGCATCCCCCGCTCCACCCTCCGCAACAAGGTCAACAAGTTCGGACTCACCCCCGACCACGAGTCGGAACCCGACAGCGACCAGGAACGAACAGAATCCCCACCCTCCGTCATACTAAAAATCCCAACCTTCCCCCCACCAGACGACAAAAGCCCCTCACCAGCCACCCCAGTCACAACACCCATTACCCCGATGACCCCGAACTTCCAACCCCACAACAACCAAACGCCATTACTCCTCCCACCTTCGGTTTTCGCCGATCCACCGACCCAGCATCTCTTCACGTCTCTCAGCGATGTGATAGCGAAGAGCATCAGCCAAAAGTTCCAGCAGCCGCTGGACCGGTCCCAGGCCGACATGCAGCAGTACATGCGCGCCCCGGACAGACACGTCTCCGTCATCAAAACGCCCCCTGATAACCATCACAGGAACTACCAAATGCCGAGTAATTCTAGAGGCGTTTCGAATAACAATGGACAAGCTGCCGCAGGGGGGAAGGGCACGCGTCCTAAGAGAGGAAAGTACAGAAACTACGATAGAGACAGTCTGGTGGAAGCCGTGAAGGCGGTCCAGAGAGGCGAGATGTCGGTGCACCGCGCCGGCTCCTACTACGGAGTACCGCACTCGACCCTCGAGTATAAAGTCAAGGAGCGGCATTTGATGCGCCCGCGGAAACGCGAGCCGAAACCCCAACCTGACGTAAAGCCACAGCCGCCGAAGCCGCAACCCCCGAAGCCGGCAGCGAAGCCCTTCTCAAACGGACTCAACGGTCCCGAACCAGGTGGCTACCCTCCAGGGTATCCCCCATTTTGGCCGGGGGCGAGCTTCGCGCCGCACCCCGCCCCGGATCTGTACGCGTCACACATGATGCGCCGGTTGCGTGAAGAGGCTCCCCCGCCGGCGAACGGATCCTTCCTCGAAGGCATCATCAGGTCTAGCTTGGAGCGGCCCGGTGCTGCGCTGCTGCAGCGGTTGACGGCCGAGCCGCGGGTGCCCGGGCTGCCGCAGGACTCGCCGAGTCTGCTCAGGAGGCTGGCGGGGACCGCGTCGCCGGAGGACGGGCCGCCGGCGCGACGACCGCGCCTGGACAGCTCCGACAGACAACTGGCTGCGGAGATGCGCGAAGCCGTGCAGCGACTGCGAGCAGACAAGCTGCGGCCTCGCAACGGGACCCCCACCCCTCCACTGTCGCccccgcccgcgccccccgcgccccctgACCGCGCCTAG
- Protein Sequence
- MSPASESDSSSVSGAKSPAAAAPPLLQNLLQLHAQNPQAIAQFQQMMAALAVAGLVPPPFTQNWMLPRMVQNRPQCDTLAEDKAAPPSPAPEQPLDLSAKSTSSTSGTPPPDPKTLDNRLKRAALDGAGNSKRNYTEDELQSALRDIKTGRLGTRRASVVYGIPRSTLRNKVNKFGLTPDHESEPDSDQERTESPPSVILKIPTFPPPDDKSPSPATPVTTPITPMTPNFQPHNNQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRSQADMQQYMRAPDRHVSVIKTPPDNHHRNYQMPSNSRGVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPAAKPFSNGLNGPEPGGYPPGYPPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRVPGLPQDSPSLLRRLAGTASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01509508;
- 90% Identity
- iTF_01509508;
- 80% Identity
- -