Lhal016352.1
Basic Information
- Insect
- Lobophora halterata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_932525835.1
- Location
- CAKOAV010000041.1:5967896-6008297[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-15 5.6e-12 45.3 0.0 1 41 356 397 356 401 0.94 2 2 5.9e-19 1.2e-15 57.1 0.0 1 43 563 606 563 608 0.95
Sequence Information
- Coding Sequence
- ATGTACGGAATCCTTCTACAAAGTGGAATCGACTCACCCTTGGCCGGTCTAGAACGGGTAGCGGAAGAGTTGATGGGTCGAAGAAAATGGAAGCAATACCAGGACACGTTAATACCGAGACGAGAAGAGTCCAGCGGCGAGGATTCCACACCGTCCTCAGACCAGCCGCCCGCGCTAAAGATAAAGACCATAGCCCAGATCAACGAGGACGATGGACCCACCGGTCCAGGTCCCAACGGTCCCGGTCCAAACGGTTCCGGTCCAAACGGCCCCGGTCCGAGACGACACGAGACGATACTAGAGAGTTTGATAAAACGGCCCGCGACGCAACCGAAGTTGGAAATGGAAGAACCCACAGATTGGAAACCTCCAGATAAGTGCTATTTTTGCACTGATGGTGATAAAGGAGAGGTTGAGACTCGGCCGCAAGGGGGCGCTACGAGTCCTGCATCGGAGTCAGATAGCAGCGAGGTGTCAGGAGCTAAGAGCCCCGAGGCAGCTGCGCCCCCCTTACTGCAGAACCTACTACAACTCCACGCGCAGAACCCTCAAGCCATCGCGCAGACAGCAGCGAGGTGTCAGGAGCTAAGAGCCCCGAGGCAGCTGCGCCCCCCTTACTGCAGAACCTACTGCAACTCCACGCGCAGAACCCTCAAGCCATCGCGCAGCAGCGAGGTGTCAGGAGCTAAGAGCCCCGAGGCAGCTGCGCCCCCCTTACTGCAGAACCTACTGCAACTCCACGCGCAGAACCCTCAAGCCATCGCGCAGTTCCAAACTATGATGGCGGCGCTGGCGGCGCTCGGCACGGGCCTGGTGCCTCCGCCCTTCGCGCAGAACTGGATGCTGCCCAGAATGGTGCAGCCGAGCCGGCAGCAGTGCGATACGCTAGCAGACGACAAGGCCGCCCCGTCGTCCCCGCTCCTGGCCGAGCAGCCTTTGGACCTGAGTGCGAAGTCCACCTCCAGCACCAGCGGTACCCCACCGCCTGATGCCAAGAATTTGGATAACCGATTGAAACGCGCAGCCCTAGACGGTCCCTGCAATAGTGCGACCAAACGGACATACACGGAAGATGAGCTCCAAATGGCGCTCAGGGACATTCAGTCCGGCCGCCTCGGAACGCGGCGAGCCGCCGTCGTGTACGGAATCCCGCGATCCACCCTCCGCAACAAAGTCAACAAGCTTGGCATCACCCCTGAACAACACGAGTCGGAAAACGACAGTGACCCCGAAAGAACTGACTCTCCATCGCCCTCCGTCATCTTAAAGATACCCACCTTCCCACCACCCGATGATAAAAGCCCTTCCCCGGCCACTCCAGTTACCCCCATCACACCCATGCTATCCTGTCACAAACCATCCCTAAACCCCAGTTGCCAACCCTCTCTGCTCCTCCCACCATCGGTCTTCGCCGATCCACCGACCCAACACCTCTTCACATCACTCAGTGACGTCATCGCCAAAAGCATTAGCCAAAAGTTCCAGCAACCCTTGGACAGAACGCAAGCGGAAATGCAGCAATACATGCGAGCTCCCGATAGGCATGTCAGCGTCATAAAAACCCCTCCTGATAACCAGAGGAACTACCAAATGCCGAGCAATTCACGAGGCGTGACGAACAACAACGGCCAAGCGGCCGCTGGGGGTAAAGGGACCCGCCCGAAACGAGGGAAATACAGGAACTATGATAGAGACAGTCTGGTCGAAGCTGTCAAAGCGGTTCAGAGAGGAGAAATGTCGGTGCATCGCGCTGGATCGTACTACGGGGTACCGCATTCGACTCTCGAATACAAAGTGAAGGAGCGACATCTGATGCGGCCGCGGAAACGCGAGCCTAAACCTCAACCCGATATAAAGCCGCAGCCTCCAAAACTACCTCCACCCAAACAGGCGACGAAACCCTTCTCAAACGGAATGAATGGGCCCGAAACCGGCGGCTACCCTCCAGGATACCCCTTCTGGCCCGGAGCCAGTTTTGCTCCACACCCAGCTCCGGATCTATACGCGTCTCATATGATGCGGCGACTGCGCGAGGAAGCTCCTCCACCCGCTAACGGTTCCTTCCTCGAAGGAATCATCAGGTCTAGTTTGGAGCGGCCCGGTGCGGCGTTGCTCCAGCGATTGACGGCGGAACCACGTGCGCCTGGATCGGGACCGATCGATTCTCCGAGTCTTCTGAGAAGGCTAGCGGGCACCGCGTCTCCAGAAGACGGGCCGCCGGCCAGACGACCGCGCTTGGACAGCTCTGATCGACAACTGGCGGCAGAGATGCGCGAGGCCGTGCAGCGACTGCGCGCGGACAAACTGCGGCCGCGCAACGGGACCCCCACACCCCCGCTGTCCCCCCCGCCGGCCCCCCCGGCCCCCCCGGACCGCGCGTAG
- Protein Sequence
- MYGILLQSGIDSPLAGLERVAEELMGRRKWKQYQDTLIPRREESSGEDSTPSSDQPPALKIKTIAQINEDDGPTGPGPNGPGPNGSGPNGPGPRRHETILESLIKRPATQPKLEMEEPTDWKPPDKCYFCTDGDKGEVETRPQGGATSPASESDSSEVSGAKSPEAAAPPLLQNLLQLHAQNPQAIAQTAARCQELRAPRQLRPPYCRTYCNSTRRTLKPSRSSEVSGAKSPEAAAPPLLQNLLQLHAQNPQAIAQFQTMMAALAALGTGLVPPPFAQNWMLPRMVQPSRQQCDTLADDKAAPSSPLLAEQPLDLSAKSTSSTSGTPPPDAKNLDNRLKRAALDGPCNSATKRTYTEDELQMALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKLGITPEQHESENDSDPERTDSPSPSVILKIPTFPPPDDKSPSPATPVTPITPMLSCHKPSLNPSCQPSLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRTQAEMQQYMRAPDRHVSVIKTPPDNQRNYQMPSNSRGVTNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDIKPQPPKLPPPKQATKPFSNGMNGPETGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRAPGSGPIDSPSLLRRLAGTASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01509508;
- 90% Identity
- -
- 80% Identity
- -