Cv-a016559.1
Basic Information
- Insect
- Chloroclystis v-ata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963691955.1
- Location
- OY829906.1:12600679-12606835[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-14 1e-10 41.6 0.0 1 38 76 114 76 117 0.95 2 2 4.6e-19 8e-16 57.9 0.0 1 43 280 323 280 325 0.95
Sequence Information
- Coding Sequence
- ATGATTCCTTATTGTTGTTACGTGTTCTATAATGGGATTATCAGGTCTGCTGACGATAAGCCAGCCCCCTCGCCGCCGCTGCAGACGGAACAACCCCTGGACCTCAGCGCGAAGTCCACCTCCAGCACCAGCGGAACACCTCCTCCAGATGCCAAGAACCTGGATACCAGATTGAAACGCACAGGGCACGACGGCGCCTGCAACAGTACAAGCAAGCGGAGCTACACGGAGGAGGACCTGCAGTTAGCGCTGCGCGACATCCAGTCGGGGCGCCTCggcacgcgccgcgcctccGTCGTCTACAGCATCCCGCGCTCCACGCTGCGCAACAAGGTCAACAAGTTCGGTCTACTCCCAGACCCACACGACTCCGAACCCGACAGCGACCCCGACAGAACAGACTCCCCACCATCCGTCATACTCAAAATACCCACATTCCCACCCCCAGACGACAAATCACCATCCCCCGCCACCCCCGTCACACCCATCACACCCATGACTCCCACATTCCAACAGTCTCTGAACGCCTGCCAAACTCCCCTTTTACTTCCACCGTCCGTCTTCGCCGACCCGCCGACCCAGCACCTCTACACGTCGATCAGTGACGTCATCGCGAAGAGCATCAGCCAGAAGTTCCAGCAGCCGCTGGACCGGCCCGACATGCAGGCCTACATGCGCGCGCCCGACAGACACGTCTCCGTCATCAAGACTCCCCCCGAGAACCATCAGAGGAACTACCAGATGCCGAGCAACTCTCGCGCGGTCTCCAACAACAACGGACAAGCGGCCGCCGGTGGGAAGGGCACGCGGCCCAAGCGGGGGAAGTACCGCAACTACGACCGAGACAGTTTAGTGGAAGCCGTCAAAGCGGTCCAGCGAGGCGAGATGTCGGTCCACAGAGCCGGCTCCTACTACGGCGTGCCGCATTCCACCCTCGAATACAAAGTCAAGGAGCGGCATCTGATGCGGCCGCGGAAACGCGAGCCGAAACCGCAGCCCGACGTGAAACCTCAACCTCCGAAGCCGCAGCCTCCGAAGCCGGCGTCGAAGCCCTTCACGAACGGCCTGAACGGGCCCGAGGGAGGCTACCCGCCGGGGTACCCCTTCTGGCCGGGAGCGAGCTTCGCGCCGCATCCCGCGCCGGACTTGTACGCGTCGCACATGATGCGGAGATTACGTGAGgaggcgccgccgcccgcgaaCGGTTCGTTCCTGGAAGGGATCATCAGGTCTAGTTTGGAGCGTCCcggcgcggcgctgctgcAGCGGCTGACGgaggggcggggcgggggggcGCAGGAGTCGCCGAGCCTGCTGCGGCGGCTGGCGGGGTCGCCGGAGGAGGGCCCgccggcgcgccgcccgcgGCCGGACTCCTCGGACCGCGCGCTGGCCGCGGAGATGCGCGAGGCCGTGCTGCAGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACCCCCCCGCTGtccccgccgcccgcgcccgcgccccccgACCGCGTCTAG
- Protein Sequence
- MIPYCCYVFYNGIIRSADDKPAPSPPLQTEQPLDLSAKSTSSTSGTPPPDAKNLDTRLKRTGHDGACNSTSKRSYTEEDLQLALRDIQSGRLGTRRASVVYSIPRSTLRNKVNKFGLLPDPHDSEPDSDPDRTDSPPSVILKIPTFPPPDDKSPSPATPVTPITPMTPTFQQSLNACQTPLLLPPSVFADPPTQHLYTSISDVIAKSISQKFQQPLDRPDMQAYMRAPDRHVSVIKTPPENHQRNYQMPSNSRAVSNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPASKPFTNGLNGPEGGYPPGYPFWPGASFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTEGRGGGAQESPSLLRRLAGSPEEGPPARRPRPDSSDRALAAEMREAVLQLRADKLRPRNGTPTPPLSPPPAPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01509508;
- 90% Identity
- -
- 80% Identity
- -