Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: -
Assembly: GCA_001594055.1
Location: NW:1301887-1327688[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.1 5.3e+02 0.7 0.3 2 15 210 223 210 225 0.78

2 15 0.00086 0.056 13.2 5.1 1 23 243 266 243 266 0.92

3 15 0.0033 0.21 11.4 1.1 1 23 625 648 625 648 0.94

4 15 4.9 3.2e+02 1.4 1.0 5 23 655 674 654 674 0.93

5 15 1.3 83 3.2 0.3 2 23 680 701 680 701 0.94

6 15 1.4e-05 0.00094 18.8 0.1 1 21 882 902 882 903 0.96

7 15 4.9e-05 0.0032 17.1 0.1 2 23 910 932 909 932 0.92

8 15 0.075 4.9 7.1 5.2 1 23 942 965 942 965 0.94

9 15 0.015 0.97 9.3 0.5 2 21 993 1012 992 1013 0.93

10 15 0.079 5.2 7.0 6.1 1 23 1054 1077 1054 1077 0.92

11 15 0.27 18 5.4 1.2 1 19 1126 1144 1126 1146 0.93

12 15 0.047 3.1 7.7 7.0 1 23 1154 1177 1154 1177 0.96

13 15 0.42 28 4.8 0.7 1 23 1247 1270 1247 1270 0.90

14 15 0.087 5.7 6.9 0.4 1 23 1538 1561 1538 1561 0.96

15 15 0.0083 0.55 10.1 1.5 2 23 1588 1610 1587 1610 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.1	5.3e+02	0.7	0.3	2	15	210	223	210	225	0.78
2	15	0.00086	0.056	13.2	5.1	1	23	243	266	243	266	0.92
3	15	0.0033	0.21	11.4	1.1	1	23	625	648	625	648	0.94
4	15	4.9	3.2e+02	1.4	1.0	5	23	655	674	654	674	0.93
5	15	1.3	83	3.2	0.3	2	23	680	701	680	701	0.94
6	15	1.4e-05	0.00094	18.8	0.1	1	21	882	902	882	903	0.96
7	15	4.9e-05	0.0032	17.1	0.1	2	23	910	932	909	932	0.92
8	15	0.075	4.9	7.1	5.2	1	23	942	965	942	965	0.94
9	15	0.015	0.97	9.3	0.5	2	21	993	1012	992	1013	0.93
10	15	0.079	5.2	7.0	6.1	1	23	1054	1077	1054	1077	0.92
11	15	0.27	18	5.4	1.2	1	19	1126	1144	1126	1146	0.93
12	15	0.047	3.1	7.7	7.0	1	23	1154	1177	1154	1177	0.96
13	15	0.42	28	4.8	0.7	1	23	1247	1270	1247	1270	0.90
14	15	0.087	5.7	6.9	0.4	1	23	1538	1561	1538	1561	0.96
15	15	0.0083	0.55	10.1	1.5	2	23	1588	1610	1587	1610	0.95

Sequence Information

Coding Sequence: ATGGCTCGAGTTCAACCATATGAAAGAGCTGTGAATGCTGTAATCATACATACAAATCCAGCACTTTGTATAGAAATCCAAAATGGGACGAAGATTAAGGAAGAACCTATCGAAGAGCCTACAACATCGAATACTGATACAACTGAAGATGATACTCCTAtagttagaaataattatagtttaattGATCATGATCATCATTATTGCGACAAATCATTACctaataatgataattcatGTAAAACcataaataacacaaaacaCAGACATTCATCAAATTATCATAATGTACATTCAAACGACGTAACTAATACTGTTAATACAGatcgtaaaaatgtaaaaacaaagaaagaaatagataATACCTTACCACGTTTtaagaaacgaaaatattccAATGAAGAAATCTTTAGTAATGAAAACACTAGTGCATTATGTTCAGTAACCGAaaattttaaaggaaaaaagaaacataaaagcattacattacattataaaacaaaaatacaacgtaagaataaattaaaaaaaaagaaaggatttACATGTGACATATGTTTTAGGAAATTCGGTTGTCTTCCACATTGGAAACTccataaacaatattatgaaCTTGGTAAAAGTAATAAGTGCAGggtttgtaataaatatttcatggtTTATGACAAATTACAGTTTGATACGTGTCGTTGCATACATAGCATGCGTAGTACATACTTGTCTGCatacaattgtaatttttgtaatcgtagttttaaaaataaatttcttttacaatcccacttatttcatatacataatgagttaatatgttttaatggCACTATTAAACGTAAGACTTCTAAATCCAAGATCTTTAAAGTAAATACATCTCCTAAAGATGATATTTTAAGAACTAGTGCAAATAAAAACTCATTATGTTCAAATAATCTTGTTCAATCAGAAAAGATAAATACTACGCTtacaaacataaataaatctcGTAACGATGATGTGATTAATACTGAGAAATCAAGAACCGAAAAATTACTCAATAATGAAGTGTCGCCATCTAAAAGATTACGGCAACCAACGTTAACGGAATATCTTGAGCTTTGCAAAAAGAAACGCATTAAACTCAGTCTAAGCAAATTGAACATTATGAAAGATGATTTTCCTACGTGTGCTTTACATCGTGATGATCAAACAGAAAAACTTTCAGAAGAACAAAATCGACAATCTTTATCTACACAATCAGATAATCTTCTAAAACAAACGGTACGTTCTATTCAGAAACAAAGTATGAAACATGAAACGCATAAAAAGCCATTTGTAAAACTACATGCGGATGTTGAAATGATGAAGTCTTTTCTGGAAAAACTTTCTAATACGGTTGTTGAAGATAAAATAACCGAAGCTGGAacaagtaatattatttcatatgatCATGGAATACCTTATAGTTTACGATCTTTAAATGGAGTCTCTTCCGTGAAAGCAAGTTCAAATTTAGGAATGAGGGAAAACAAAAGTGTATCTAAGAAGTCTCGATTTGAtacagaatttaatattaaaagggAAGAAAACGGGATTGATTTAGAAAAGGTAACTTCTAAAGTggattggaaaaatattatggctcattttaaatgcaagGAGAGTACAATTTCTTTGACAAGATGTGATGAACAACCAAGAAATTCTTATCAAATTTCTGCTTTTAAAGCCATGAAAAACACTTGTCTTACTCCTGGATCCAACTTTCAAGAAAGTGATGTACGAAATGAAGTAAAGCTAAAAAACGTAGAAGTTTCTTTGGAACGTTTGATAGTTATTCCAActgtacatataaaagaaaaaacaccGGATGTCGAGAAAcacaataacaattattttttgtgtaaaatttgtaaggagagtttttcttcaaaattggCTAAACGTATCCATATTAAGTCGTCTCATATAGCATATATGTCAAGCATATGTAGTGCACGTTATAAGCTAAAGCATAAATTGCTTCAGCATTATCTACGCGAACATGTTTCTAAACAAAATCAGTGTTGTATTTGTTATGTATTATTACCTGATTATGAAGCGCTGAAGCAACACTTAAATGTTCATTGTCTGAAGTATATTCCACGACAGGACGACCAATGTTTAGTagatattgaattaaaatgcaaCTTGACTAAAAAATCTAAGTGTCTTCATGACGAGACATTCTTGTCGCGAACATCTTTAAAGGAACATCAAAGTCGTTGTACAgtacaaaaagaaatgaaagaagATCAGAAAGATTCCATGGAAGAAGGAAATTCATATTCGAAGGATATTCCTGAAATACAGCACAAGAAGACCGATGAAAATATAGTTGATATAACATGTTACGAAAGACTTAATCCAGATGATTTATATAATCCATTAAATAGCGATTGTGCACAAAAATCGAATGAAGATCAAATATCGCTTCATagtaaaaaagaacaaaaaattaacgaaGCCAATGAAAACATTcttgttaataataacttgATTGAGGAAAAAATAGGAACTATTAACGAATCGCAAGACTCTGAAAggcttttagaaaataattccataattaGTAATCAAGATGTCGCGAATATGCAATTGAATAACATtgcaacaaaaaatagaaCTTATCCCTGCGATATATGTGGAAAGCAATTTCAAACTCCTAAGAATTTGGAGATACATGTACGCAATTTTAGCTTTACCTCCGATGTTTGTCCAATGTGTGGCACAGGATTTAGTTCTAAACGTCTTTTACAGACACATATCACTGCAGCGCATGTACcacatatttcaaaaacttaCACTTTTCATTGCGTATTCTGTAACCaaggtttttttaaaaaatacgatctTCGGTctcatatattacatttacatggTCAACAAGTACTCAATACGCTCACAcgtaattctaatataaatcaaGAGAAATCCAACGAATCAATTACCCATAGCACAGTATGTAACGTTTGTAATTTGGTATTTGAAACTCATGATCACTATGTTGAGCATCGAATgtactattataaaaatcatacatTTAGATGCTCACTCTGTGAACAAAACTTTCAAGGAATGTACATGTTTCATCATCATAACAAACTTACACATTGTCCAGAAGATAAACGCAAATCATACAATTACATCTGCGACATATGCCATGAGGGATTCAATCATGAGTCACATTTTTATTCGCACAATATGCATGTGCATTCGAATGAAGTGAATTTAGATGAGACTGCAAAAGAATCTGAAGATATCAAGAATAGAAACCGAGATTATTCATCCAACATTCAGAAACAGATTAGAAATTGTTCTACAGAtcaaaaaaaacaaaatgaacaCTTGTCCAATGAGTATACTTGCCAAATTTGTCAgataaaatgtagaaatatggATCATATGGTAATgcacaaagaattttattccAATGATGGCAATTTTAGATGTGACAAATGTAATAGACGGTGCAGAAGATTTGATTTTCTTAATCAACATAAGAAATTAACTCACTCTTTGCGGGACGTTTATAATGGACATATGTGTCACATTTGTGGCGAAATCCTGGAAACAGGTATTTCATTGAAATGTCACGAAAAACACTTCCATTCAAATATTACCAGCAATAATACGGATAATTGGAAGAATTGTAATCAGCTATCatcttcaaatataatatatccagATGAATCTAAAAACAATACACGTAATGTAACTGAATACAAATGCTTATTTTGTGATATGAAATTCTTTGCTCCTAACGCTGTCCAAACACATATTGTTCATGTTCATATAGATGATATAATAGCTAAACGAGCTACTTTAAAACTTGCTCTTCCCATTACTAATAGCAATAGCATTCAGGAACAATTTGAAATTGGTCAAATACCATCAACATCGTCACTATCATCggcatcatcatcatcatcatcatcatcatcgccATCGTCAACTAAAAGTAAGTTAGCTAAACTTCTTCAAAGATCGACGATTCAACAATCTAATAACTACATCCTGAGTACTATGGCTAAAAGTGGAATGAACGGTAaaactgttaaattattaaaggaCTTTAGAACTATACattcaaaaaatacaattaccGAGAAGACTTCAATTTCATGTATTAACAAATCTAAAGACAGTATTTCGACGTGTAGTATTATTGCATCAAATATGGAATCAAAAACAGATATCTCAGTTTCTTCATCCGTTGCAACAACTTCTAGGATTGTTGCACCAGATACTGAAGTTGGAAATAACGCTTCAGTTTTTCTATCCACTGGATCAACGATATTTAAAACTGTATCCAATACTGAAGCCAAAGATAACCCTTCAATTTCTCTACCTGAATCAATCAATAATCTCCGAAAAGGTtatgaaatttctttaaaatctgGTTCGACCAATGAGTTTAAAACTAACTCATTAGCTAAGggatctataataattaataaatctaaaacAATACCTGCATATCTTTTACCAACTAGACCCTTCTCATTCAAACGTATTATACCAAAACCTTGGAAAAGCAATGAAATTACAAATCagaaatctgaatcagtgaacAGTTACGCCACTGATCATGGTTATTCATGCCCATTATGTCCACTAGAATACCCATCTTTGATGTTCTTCCATGCACATCTCAAATATGCTCATGCAGATTCCATCGTTTCCATTCGAACTGATGAATTGACTGTCCCACAGGTGAATGAATCTCAGAAAGCCTCTATGATAGAATGTTTATTGTGTCCATGTACCTTCCCTGATGAGACCAAGTATAAGAAGCATTTGAGAAACTCTCATACATATTATGTGTATATCCCAAACTCTCAAGAGATGACGAAAATTAATAACGTGCGTAATCCTCTAACGCAGACAAACGTTAACCGAAAGAGTACAGTTCCTGAAACAATTACTAtagatgatgatgatgataacgTCAAGAATACATCAGATCAAGGAACAGCCGAAGTTACAACGCTTAATTACAAAGaacaaaatgagaaaattggTAAATTAAGAGTGAAGCCTCTTGCAAAGatcattgaaaatttatctatgAATTCTGCATCGAAACTCCTATAG
Protein Sequence: MARVQPYERAVNAVIIHTNPALCIEIQNGTKIKEEPIEEPTTSNTDTTEDDTPIVRNNYSLIDHDHHYCDKSLPNNDNSCKTINNTKHRHSSNYHNVHSNDVTNTVNTDRKNVKTKKEIDNTLPRFKKRKYSNEEIFSNENTSALCSVTENFKGKKKHKSITLHYKTKIQRKNKLKKKKGFTCDICFRKFGCLPHWKLHKQYYELGKSNKCRVCNKYFMVYDKLQFDTCRCIHSMRSTYLSAYNCNFCNRSFKNKFLLQSHLFHIHNELICFNGTIKRKTSKSKIFKVNTSPKDDILRTSANKNSLCSNNLVQSEKINTTLTNINKSRNDDVINTEKSRTEKLLNNEVSPSKRLRQPTLTEYLELCKKKRIKLSLSKLNIMKDDFPTCALHRDDQTEKLSEEQNRQSLSTQSDNLLKQTVRSIQKQSMKHETHKKPFVKLHADVEMMKSFLEKLSNTVVEDKITEAGTSNIISYDHGIPYSLRSLNGVSSVKASSNLGMRENKSVSKKSRFDTEFNIKREENGIDLEKVTSKVDWKNIMAHFKCKESTISLTRCDEQPRNSYQISAFKAMKNTCLTPGSNFQESDVRNEVKLKNVEVSLERLIVIPTVHIKEKTPDVEKHNNNYFLCKICKESFSSKLAKRIHIKSSHIAYMSSICSARYKLKHKLLQHYLREHVSKQNQCCICYVLLPDYEALKQHLNVHCLKYIPRQDDQCLVDIELKCNLTKKSKCLHDETFLSRTSLKEHQSRCTVQKEMKEDQKDSMEEGNSYSKDIPEIQHKKTDENIVDITCYERLNPDDLYNPLNSDCAQKSNEDQISLHSKKEQKINEANENILVNNNLIEEKIGTINESQDSERLLENNSIISNQDVANMQLNNIATKNRTYPCDICGKQFQTPKNLEIHVRNFSFTSDVCPMCGTGFSSKRLLQTHITAAHVPHISKTYTFHCVFCNQGFFKKYDLRSHILHLHGQQVLNTLTRNSNINQEKSNESITHSTVCNVCNLVFETHDHYVEHRMYYYKNHTFRCSLCEQNFQGMYMFHHHNKLTHCPEDKRKSYNYICDICHEGFNHESHFYSHNMHVHSNEVNLDETAKESEDIKNRNRDYSSNIQKQIRNCSTDQKKQNEHLSNEYTCQICQIKCRNMDHMVMHKEFYSNDGNFRCDKCNRRCRRFDFLNQHKKLTHSLRDVYNGHMCHICGEILETGISLKCHEKHFHSNITSNNTDNWKNCNQLSSSNIIYPDESKNNTRNVTEYKCLFCDMKFFAPNAVQTHIVHVHIDDIIAKRATLKLALPITNSNSIQEQFEIGQIPSTSSLSSASSSSSSSSSPSSTKSKLAKLLQRSTIQQSNNYILSTMAKSGMNGKTVKLLKDFRTIHSKNTITEKTSISCINKSKDSISTCSIIASNMESKTDISVSSSVATTSRIVAPDTEVGNNASVFLSTGSTIFKTVSNTEAKDNPSISLPESINNLRKGYEISLKSGSTNEFKTNSLAKGSIIINKSKTIPAYLLPTRPFSFKRIIPKPWKSNEITNQKSESVNSYATDHGYSCPLCPLEYPSLMFFHAHLKYAHADSIVSIRTDELTVPQVNESQKASMIECLLCPCTFPDETKYKKHLRNSHTYYVYIPNSQEMTKINNVRNPLTQTNVNRKSTVPETITIDDDDDNVKNTSDQGTAEVTTLNYKEQNEKIGKLRVKPLAKIIENLSMNSASKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476577; iTF_01477219; iTF_00181628; iTF_00016353; iTF_00182258; iTF_00015709;
90% Identity: -
80% Identity: -