Basic Information

Insect: Acromyrmex heyeri
Gene Symbol: -
Assembly: GCA_017607565.1
Location: JAANIB010008894.1:118284-123308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 69 3.3 4.6 1 20 158 177 158 179 0.92

2 15 2.6 1.3e+02 2.4 0.3 2 17 187 202 186 203 0.87

3 15 0.022 1.1 9.0 4.8 1 23 220 243 220 243 0.92

4 15 0.0061 0.3 10.7 1.1 1 23 603 626 603 626 0.94

5 15 0.55 27 4.6 0.7 5 23 633 652 632 652 0.94

6 15 0.26 13 5.6 0.8 2 23 658 679 657 679 0.97

7 15 1.5e-05 0.00075 18.9 0.1 1 21 859 879 859 880 0.96

8 15 0.00024 0.012 15.1 0.1 2 23 887 909 886 909 0.92

9 15 0.32 16 5.3 7.0 1 23 919 942 919 942 0.94

10 15 0.21 10 5.9 0.2 2 21 969 988 968 989 0.91

11 15 0.92 46 3.8 7.7 1 23 1030 1053 1030 1053 0.91

12 15 0.045 2.2 8.0 7.1 1 23 1125 1148 1125 1148 0.96

13 15 0.0019 0.093 12.3 0.6 1 23 1218 1241 1218 1241 0.93

14 15 0.24 12 5.7 0.4 1 23 1429 1452 1429 1452 0.95

15 15 0.0087 0.43 10.2 1.5 2 23 1479 1501 1478 1501 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	69	3.3	4.6	1	20	158	177	158	179	0.92
2	15	2.6	1.3e+02	2.4	0.3	2	17	187	202	186	203	0.87
3	15	0.022	1.1	9.0	4.8	1	23	220	243	220	243	0.92
4	15	0.0061	0.3	10.7	1.1	1	23	603	626	603	626	0.94
5	15	0.55	27	4.6	0.7	5	23	633	652	632	652	0.94
6	15	0.26	13	5.6	0.8	2	23	658	679	657	679	0.97
7	15	1.5e-05	0.00075	18.9	0.1	1	21	859	879	859	880	0.96
8	15	0.00024	0.012	15.1	0.1	2	23	887	909	886	909	0.92
9	15	0.32	16	5.3	7.0	1	23	919	942	919	942	0.94
10	15	0.21	10	5.9	0.2	2	21	969	988	968	989	0.91
11	15	0.92	46	3.8	7.7	1	23	1030	1053	1030	1053	0.91
12	15	0.045	2.2	8.0	7.1	1	23	1125	1148	1125	1148	0.96
13	15	0.0019	0.093	12.3	0.6	1	23	1218	1241	1218	1241	0.93
14	15	0.24	12	5.7	0.4	1	23	1429	1452	1429	1452	0.95
15	15	0.0087	0.43	10.2	1.5	2	23	1479	1501	1478	1501	0.95

Sequence Information

Coding Sequence: ttatatgtttttcagCTTGGTATAGAAATCCAAAATGGGACGAAGATTAAGGAAGAGCCTATCGATACAACTTCGAATACTGATACAACTGAATATGATACTCCTAtagttagaaattattatagtttaattgATCATGATCATCATTATTGCGACAAATCATTATCTAATAAGTCATGTAAAAGCATAAATAACCAAGAAAACAGACATTCATCGAATGATCATAATGATTCAAACGACGTAACTAATACTGTTAATAcaaatcgtaaaaatgtaaaaacaaagaaagacATAGATAATACCTTACCACGTTTTAAGAAACGAAAATATTCCAATGAAATCTTTAGTAATAAAAACACTAGTGCATTATGTTCAGTAACCAAAAATgttaagagaaaaaggaaacaaaaaaGCATTACATtagactataaaaaaaaaatacaatgtaagaataaattagtaaaaaaggAATTTACATGTGACATATGTTTTAGGAAATTCAGTTGTCTTTCACATTGGAAAATCCATAAACAATATTACGAACttgataaaagtaataagtgcagggtttgtaataaatatttcatagctAACGACAAATTACAGTCTGATACATGTCATTGCGTTCATAGCATGCGTAGTACATACTTATCTTCatacaattgtaatttttgcagTCGtacttttaagaaaaaattgcttttacaATCTCACTTATTTCATGTacataatgaattaatatgttttaatgacACTGTTAAACGTGAGATTTCCAAATCTAAGATCTTTAATGTAAATACATCTCCTGAAGATGATATTTTAAGAACtagtgcaaataaaaattcattatgttCAAATAATCTTGTTCAATCAGAAGAGATAGATACTCTTATAAACGTAAATAAATCTCATAACGATGATGTGATTAATATTGAGAAATCAAGAAccgaaaaattattcaataatgaaGTGTCGCCAATTAAAAGATTACGGCAACCAACATTAACAGAATATCTTGAGCTTTGCAAAAAGAAacgcaatattaaatttagtccAAGTAAATTGAACATTACAAAAGATGATTTTCCTACGTGTGCTTTACGTCATGATGATCAAATAGAAAAACTTCCAGAAGAACAAAATGGACAAATTGATCCTTTATCTACACAATCAGATAATCTAAAACGAACAGTACGTTCTATTCAGAaacaaaatatgaaacatGAAATGCATAAAAAGCCATTTGTAAAACTACATGCAGATGTTGAAATGATGAAGTCTTTTCTGGAAAAACTTTCTGATACGGTTGTCGAAGATAAAATAACCGAAGATGGaacaagtaatattatttcatatgatCGTGGAATACCTTACAGTTTACGATCTTTAAATGGAGTCTCTTCCGGGGAAGCAAGTTCAAATTTAGGAATGAGGGAGAACAAAAGTGTATCTAAGAAGTCTCGATTTGGtacagaatttaatattaaaaataaaggaaacgGGATTCATTTAGAAAAGATAACTTCTAAAGTGGattggaaaattattatgactcattttaaatgcaaggagtgtacaatttttttaacaagatgTGATGAACAACCAAGAAATTCTTatcaaatttcttcttttaaagcCAAGAAAAATACTTGTCTTACTCCTGGATGCAACTTTCAAGAAAGTGATGTACGAAATGAAGTAAAGCTAAAAGACGTAGAGGTTTCTTTGGAACGTTTAACAGTTGTTCCAActgtacatataaaagaaaaaacaccAGATGTCGAGaaacacaataataattattttttgtgtaaagTTTGTAAGGAGagtttttcttcaaaattggCCAAACGTATACATATTAAGTCGTCTCATATAGCATATATGTCAAGCATATGTGGTGCACGTTATAAGTTGAAGCATAAATTACTTCAGCATTATCTACGCGAACATGTTTCTAAACAAAATCAATGTTGTATttgttatatgttattatctGATTATGAAGCGTTGAAGCAACACTTAAATGTTCATTGTCTGAAGTATATTCAACGACAGGATGACCAATATTTAATAGATACTGAATTAGAATGCAACTTAAccaaaaaatctaaatatctTCGTGACGAGACATTTTTGTCACAAACATCTTTGAAAGAACATCAAAGTCATTGTACAgtacaaaaagaaatagaagaagatCAGAAAGATTCCATGGAAGAAACAAATTCATCCCCGAAGGATATTCCTGAAGTACAGCATGAGAAGACCGATGATATAGTTGACATAACATGtcacgaaaaaattaatctggATGATTTATGTAATCCATTAAATAGTGACtgtgtaataaaatcaaatgaaCATCAAATATCgcttcataataaaaaagaacaagaaattaatgaagCTAATCAAAACATTCttgttaataataacttaattaaGGAGGAAATAGGAACTATTAACGAATCGCAACACCCTAAAAAgcttttggaaaataatttcacaattaataATCAAGATGTCGCGAATAcacaattgaataatattacaacaaaGAATGGAACTTATCCCTGCGATATATGTGGAAAGCAATTTCAAACTCCCAAAAATTTGGAGATACATGTACGCAATTTTAGTTTTACCTCCGATGTTTGTCCATTGTGTGGCACCGGATTTAGTTCTAAACGTTTTTTACAATCACATATCACTGCAGCGCATGTACCacatatttcaaaaacttACAATTTTCATTGCGTATTCTGTAACCaaggtttttttaaaaaacacgaTCTTCGGTCTCATATATTACACTTACACGATCAACAAGTACTCAATACGCTCACATGCAATTCTAATAATCAAGAGAAATCCAACGAATCAGTTACTCATAGCACAGTATGTAATGTTTGTAATTTGGTATTTGAAACTCATGATCGCTATGTTGAACATCGAAtgtactattataaaaatcatacattTAGGTGCTCACTCTGTGAACAAAACTTTCAAGGAATGTACATGTTTCATCATCATAACAAACTTACACATTGTCCAGAAGATAAACGCAAATCATACAATCACATCTGCGAGGTATGCCATGAGGGATTCAATCATGAGTCACATTTTTATTCGCATAATATGCATGTGCATTCGAATGAAGTGAATTTAGGTGAGACTGCAAAAGAATCTGAAGATACCAAGAATAGAAGCCGGAATTCATCCAACGTCCAGAAACAGATTAGAAATTGTTCTATGGatcaagaaaaacaaaatgaacaaTCCAATGAGTATATTTGCCAAATTTGTCAGATGAAATGTAGAAATATGGTAATGcacaaagaattttattccaatGATGGCGATTTTAAATGTGACAAGTGTAATAGACGATGCAAAACATTCGATTTTCTTAATcaacataagaaattaacaCACTCTTGTCGGGATGTTTATAATGGACATATATGTCACATTTGTGGTGAAGTCTTGGAGACAGGTATTTCATTGGAATGTCATGAAAAACACTTccattcaaatattatcagcAATAATACGGATAATTGGAAGAATTGTAATCAGCTATCatcttcaaatataatatattcaggTAAATCTAAGAACAATACATGTAATGTAACTGAATACAAATGCTTATTTTGTGATATGAAGTTCTCTACTCCTAACACTGTCCAAACACATATTGTTTATGTTCATATGGATGATATGATAGCTGAACGAGCTACTTTAAAACTTGCTCTTCCCATTACTAATAGCAATAGCATTCAGAAACGATTTGAAATTGGTCAAATACCATCAACATTGTCACTgtcatcgtcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcaacTGAAAGTAAATTAGCTGAACTTCTTCAAAGATCGACGATTCAACAATCTAATAACATCAAAAGTACTATGactaaaaatggaataaacaataaaactgttgaattatttaagaactTCAGAACTATGTAtccaaaaaatacaattacggAGAAGACTTCAAATTCATGTTATGAAATTCCTTTAAAATCTGGTTCGACCAATAGATTTAAAACTAATTCATTAGCTAAGGgatctataataattaataaatccaaAACAGTACCTGCATATCTTTTACCAACTAGATCCCTATCAACATTCAAACGTATTATGCCAAAACCTTGGAAAAGCAATGAAATTACAAATCagaaatctgaatcagtgaacAGTTACGTCACTGGTCATGGTTATTCATGCCCATTATGTCCGCTAGAATACCCATCTTTGCTGTTCTTCCATGCACATCTCAAATATGCTCATGCAGATTCCATCGTTTCCATTCGAACTGATGAATTGACTGTCCCACAGGTGAATAAATCTCAGAAAGCCTCTATGATAGAATGTTTGTTGTGTCCATGTACTTTCCCTGATGAGACCAAGTATAAGAAGCATTTGAGAAACTCTCATacatattatgtgtatatccCAAATTCTCAAGAGATGacgaaaattaataacgtaCGTAATCCTCTAACACAGACAAACGTTAACAAAAAAAGCACAGTTCTTGAAACAATTACTAtagatgatgatgatgataacgTGAAGAATACATCAAATCAAGGAGCAGTCGAAGTTACAGCGCTCAATTACAAAGAACAGAATGAGAAAATTGGTAAATTAAGAGTGAAGCCTCTTGCAAAgatcattgaaaatttatctatgGATTCTGCATCGAAACTccta
Protein Sequence: LYVFQLGIEIQNGTKIKEEPIDTTSNTDTTEYDTPIVRNYYSLIDHDHHYCDKSLSNKSCKSINNQENRHSSNDHNDSNDVTNTVNTNRKNVKTKKDIDNTLPRFKKRKYSNEIFSNKNTSALCSVTKNVKRKRKQKSITLDYKKKIQCKNKLVKKEFTCDICFRKFSCLSHWKIHKQYYELDKSNKCRVCNKYFIANDKLQSDTCHCVHSMRSTYLSSYNCNFCSRTFKKKLLLQSHLFHVHNELICFNDTVKREISKSKIFNVNTSPEDDILRTSANKNSLCSNNLVQSEEIDTLINVNKSHNDDVINIEKSRTEKLFNNEVSPIKRLRQPTLTEYLELCKKKRNIKFSPSKLNITKDDFPTCALRHDDQIEKLPEEQNGQIDPLSTQSDNLKRTVRSIQKQNMKHEMHKKPFVKLHADVEMMKSFLEKLSDTVVEDKITEDGTSNIISYDRGIPYSLRSLNGVSSGEASSNLGMRENKSVSKKSRFGTEFNIKNKGNGIHLEKITSKVDWKIIMTHFKCKECTIFLTRCDEQPRNSYQISSFKAKKNTCLTPGCNFQESDVRNEVKLKDVEVSLERLTVVPTVHIKEKTPDVEKHNNNYFLCKVCKESFSSKLAKRIHIKSSHIAYMSSICGARYKLKHKLLQHYLREHVSKQNQCCICYMLLSDYEALKQHLNVHCLKYIQRQDDQYLIDTELECNLTKKSKYLRDETFLSQTSLKEHQSHCTVQKEIEEDQKDSMEETNSSPKDIPEVQHEKTDDIVDITCHEKINLDDLCNPLNSDCVIKSNEHQISLHNKKEQEINEANQNILVNNNLIKEEIGTINESQHPKKLLENNFTINNQDVANTQLNNITTKNGTYPCDICGKQFQTPKNLEIHVRNFSFTSDVCPLCGTGFSSKRFLQSHITAAHVPHISKTYNFHCVFCNQGFFKKHDLRSHILHLHDQQVLNTLTCNSNNQEKSNESVTHSTVCNVCNLVFETHDRYVEHRMYYYKNHTFRCSLCEQNFQGMYMFHHHNKLTHCPEDKRKSYNHICEVCHEGFNHESHFYSHNMHVHSNEVNLGETAKESEDTKNRSRNSSNVQKQIRNCSMDQEKQNEQSNEYICQICQMKCRNMVMHKEFYSNDGDFKCDKCNRRCKTFDFLNQHKKLTHSCRDVYNGHICHICGEVLETGISLECHEKHFHSNIISNNTDNWKNCNQLSSSNIIYSGKSKNNTCNVTEYKCLFCDMKFSTPNTVQTHIVYVHMDDMIAERATLKLALPITNSNSIQKRFEIGQIPSTLSLSSSSSSSSSSSSSSSSSSSTESKLAELLQRSTIQQSNNIKSTMTKNGINNKTVELFKNFRTMYPKNTITEKTSNSCYEIPLKSGSTNRFKTNSLAKGSIIINKSKTVPAYLLPTRSLSTFKRIMPKPWKSNEITNQKSESVNSYVTGHGYSCPLCPLEYPSLLFFHAHLKYAHADSIVSIRTDELTVPQVNKSQKASMIECLLCPCTFPDETKYKKHLRNSHTYYVYIPNSQEMTKINNVRNPLTQTNVNKKSTVLETITIDDDDDNVKNTSNQGAVEVTALNYKEQNEKIGKLRVKPLAKIIENLSMDSASKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01477929;
90% Identity: iTF_00015709;
80% Identity: -